Gambusia affinis (western mosquitofish): 122833508
Help
Entry
122833508 CDS
T07758
Symbol
sdc4
Name
(RefSeq) syndecan-4 isoform X1
KO
K16338
syndecan 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04512
ECM-receptor interaction
gaf04514
Cell adhesion molecule (CAM) interaction
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122833508 (sdc4)
04514 Cell adhesion molecule (CAM) interaction
122833508 (sdc4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
122833508 (sdc4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gaf00535
]
122833508 (sdc4)
Proteoglycans [BR:
gaf00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
122833508 (sdc4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
AA_permease_2
WBS28
Motif
Other DBs
NCBI-GeneID:
122833508
NCBI-ProteinID:
XP_043977059
LinkDB
All DBs
Position
LG07:complement(30538998..30550253)
Genome browser
AA seq
204 aa
AA seq
DB search
MISPLCLVLMLSASVLSESQVRETETWMPMSTTQTVAMSTDGGDPEASGDSSNGSDFGFT
DDEDDDYYNEQDDVSGSGEGETGSRPSAKPDFDNRIPDLPDPVRPTDDEVDLVKNRNEFP
RLGGEPRAKEENPSNVLMSQARGDSIFNKTEVLAAVIAGCAVCLMFAVLLILLLIYRMKK
KDEGSYDLGKKPIYKKAPTTEIYA
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgatttcccccctgtgcctcgtgttgatgctgtccgcctccgtcctctcagagtcgcag
gtcagggagacggagacctggatgcccatgagcaccacgcagacggttgccatgtcgacg
gacggcggcgacccggaggcatcgggagactcttcgaacggctccgacttcggtttcaca
gacgatgaagacgacgattattacaatgaacaagacgacgtgtccggatccggagaagga
gaaaccgggtccagaccttcagccaagcccgactttgacaaccggatccctgacctgccg
gacccggtgcgaccaacagacgacgaggtggacctggtgaagaaccgaaacgagtttcct
cggctgggcggcgaacccagagccaaggaggagaacccgtccaacgttctgatgtcccag
gccagaggggacagcatcttcaacaagacggaggtcctggcagctgtgatcgccggctgc
gccgtctgcctcatgttcgccgtgctcctcatcctcctcctcatctaccgcatgaagaag
aaggacgaaggcagctacgacctggggaagaagcccatctacaagaaggcccccaccaca
gagatctacgcgtag
DBGET
integrated database retrieval system