Gambusia affinis (western mosquitofish): 122833574
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Entry
122833574 CDS
T07758
Symbol
stau1
Name
(RefSeq) double-stranded RNA-binding protein Staufen homolog 1 isoform X1
KO
K17597
double-stranded RNA-binding protein Staufen
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
gaf01009
]
122833574 (stau1)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122833574 (stau1)
Protein phosphatases and associated proteins [BR:
gaf01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
122833574 (stau1)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122833574 (stau1)
mRNA cycle factors
Stress granule specific factors
122833574 (stau1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dsrm
Staufen_C
DSRM_2
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
122833574
NCBI-ProteinID:
XP_043977197
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All DBs
Position
LG07:17699211..17707987
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AA seq
695 aa
AA seq
DB search
MSQLQFQCPPSAIAAASAPLQLGQPQPGYSIPCAAGALPSESASQPIRSSALPAGSATPY
NTTTVYNMANPKEKTPMCLVNELARFNKIQPEYKLLSEQGPAHSKIFSVRLTLGDQYWEA
EGTSIKKAQHSAAASALAETTLPKPTVRTPRNTGRNPVDGSTHTMELNALCLKLGKKPNF
KPIDPYPGMRPPSYNYSVRAPGPYQRSMQQYYYPFPPVGPIIYHMELSIGSQQFIGKGRT
RQQAKHDAAAKALKVLQKEPMLQQLPVMNGEPEEENLNKSEISQVFEIALKRNLPVNFEI
LKEEGPPHMKSFVVRVIVGEFVGEGEGKSKKIAKKLAAAAALVELKRLPHIPSVEKKLPR
IKKKTKSIIKLQTSPEYGQGMNPISRLAQIQQAKKEKEPEYSMVTERGLPRRREFVMQVT
VCGQTAEGLGPSKKVAKRNAAEKMLELLGYKVPQPQPPKPALKSDEKTPVKKSCDGRKVT
FFEPGSAEEVSAGSKEEDFRLPYLSHQQLPAGILPMVPEVAQAVGVCQGSQIKDYSRVVP
NPGKTTITATIANELLYAGTSLTAVTILKNTNNMIQVPHGPLTRPSEQLGYLASVQGLQV
EYKDFPKNNKNEFVSLINCSSQPPLISHGIGKDIESCHDMAALNILKLLSELDQQPNERT
GNGPASGCGKQEMEGDLHLKQANSSTLAQTLDSTA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagctccagtttcagtgtccgcctagtgccattgctgctgcctctgccccgctg
cagctggggcagccgcagcctggctacagcatcccgtgtgctgcaggcgcccttccatca
gagagcgccagccagccaatcagaagctctgctctgcctgcgggctccgccactccctat
aacaccaccacagtttacaacatggcaaaccctaaagagaagacccccatgtgtttggtg
aatgagttagcccgtttcaacaagatccaacctgagtacaagcttctctctgagcaagga
ccagctcactccaagattttctcggtgaggctcacactgggagatcagtactgggaggcc
gaaggaaccagtatcaagaaagcgcagcactctgctgctgcatctgcccttgccgagacg
acgcttcccaaacccacagtgaggacaccccgcaacaccggcaggaacccagtagatggc
agcacacacaccatggagttgaatgcactttgtttgaagcttggtaaaaaacctaacttt
aaacccatcgacccatacccgggtatgcgaccaccaagctacaactacagtgtccgcgct
ccaggaccttaccagcgctctatgcaacagtactactatccatttcctccagtgggacca
ataatttaccacatggagctttccatcgggagccagcagttcattggaaagggacggacg
cggcagcaggccaaacacgacgccgctgccaaagccttgaaagtgctgcagaaggagcca
atgctgcagcagttgccagtgatgaacggggagcccgaggaggagaacttgaacaaatca
gaaataagtcaagtgtttgaaattgctctaaaacggaacctacccgtcaactttgagatt
ttaaaggaagaagggcctccacacatgaagagtttcgtagtgcgtgttatagtcggggag
ttcgtgggagagggcgagggcaaaagcaaaaagattgcaaagaagctggcagctgccgca
gcgctggtggagttaaagaggctcccccacatacccagtgtggagaagaagctgccacgc
atcaaaaagaaaacaaaatctataatcaagctgcagaccagccctgagtatggccagggg
atgaatcccatcagccgcctggctcagatccagcaggccaagaaggagaaggagccggag
tacagcatggtgacagaaagaggtttgccgcggcgcagagagttcgtcatgcaggtgact
gtgtgcggccagactgcagaggggctggggccgagcaagaaggtggccaagaggaatgca
gctgagaaaatgctggaactgttgggatataaagtgcctcagcctcaacctcccaaacca
gcactaaaatctgatgaaaagacgccagtgaaaaagtcgtgtgatgggcgcaaagtgacc
ttctttgaaccaggttctgcagaggaggtgtctgcaggctccaaagaggaggacttccgc
ttgccttacctcagccaccagcagctgcctgcaggtatcctgcccatggtgcccgaggtg
gcgcaagcagtcggggtctgccaaggatcccagatcaaggactacagccgagttgttccc
aacccgggcaagaccaccatcactgccaccatcgccaacgagctgctgtatgccggcacg
tccctgaccgctgtgaccatactaaagaacacaaacaacatgatccaggttccccacgga
ccgctcaccagaccctcggaacagcttggctatcttgcgtctgtacagggtctgcaggtg
gaatacaaggatttcccaaaaaacaataagaatgaatttgtatcgctgattaactgctcc
tcccagcctccgctcatcagtcatggcattggaaaagatatagagtcctgtcatgatatg
gctgctctgaatatattgaagttgctgtcagagttagaccagcagccaaacgaaaggaca
gggaatggaccagcctcagggtgtggcaagcaggaaatggagggtgacctgcacctcaaa
caggctaactcaagcacattggcacagacgctggatagcacggcttag
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