Gambusia affinis (western mosquitofish): 122833625
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Entry
122833625 CDS
T07758
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00260
Glycine, serine and threonine metabolism
gaf00630
Glyoxylate and dicarboxylate metabolism
gaf00670
One carbon pool by folate
gaf01100
Metabolic pathways
gaf01200
Carbon metabolism
gaf01230
Biosynthesis of amino acids
gaf01240
Biosynthesis of cofactors
gaf04981
Folate transport and metabolism
Module
gaf_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
122833625 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
122833625 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
122833625 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
122833625 (shmt2)
Enzymes [BR:
gaf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
122833625 (shmt2)
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
122833625
NCBI-ProteinID:
XP_043977279
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Position
LG07:21577867..21603529
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AA seq
501 aa
AA seq
DB search
MLSFAFKQLTRPLCHRPSIRLSVRFQQSHAATRTVDEDGSWTGQESLAEDDPEMWALLQK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPEKWGVNVQPYSGSPANFAAYTAVLKPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIFFESMPYKLNPATGLIDYEQMEITAKLFRPRLIIAGTSAYARLIDYARIKRLCT
DINAYLLADMAHISGLVAAKAVASPFEHADLVTSTTHKSLRGSRAGLIFYRKGVQSVDKK
GKEIMYDLEDKINFAVFPSLQGGPHNHAIAGVAVALKQAQSPMFREYIAQVLKNAKAMAA
ALLSKGYTLVSGGTDNHLVLVDLRPKGIDGARAERVLELVSITANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEDDFVQVVEFMDEGFKIALDVKKKTAKLQDFKNFLLQDPETVARIA
DLRHRVEAFARPFPMPGFCDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcattcgctttcaagcagctcacacggcccttgtgccatcggccctccattcgt
ctcagtgtacggttccagcagtcccatgcagccacccgaacggtggatgaagatggatcc
tggaccggacaggagagtctggctgaggacgacccagaaatgtgggctctgctgcagaag
gagaaggacagacagtgccgtggtttggagctcattgcgtctgagaatttctgcagccga
gcagctctggaagctcagggctcatgtctgaacaacaaatattccgaaggctacccaggg
aggagatactacggtggagcagaagtggttgaccaaatcgagcttctgtgtcagaagcga
gctttggaggcctttgacctggacccagagaagtggggcgtcaacgtccagccatactcg
ggttctcctgctaactttgctgcctacacagctgtactcaagccgcatgaccgcatcatg
ggcctggacctgcccgatggtggacatctgacccatggctacatgtcagatgtgaagagg
atctctgcaacatcaatcttctttgagtccatgccttacaagctaaaccctgcaacggga
ctcatagactatgagcagatggaaataacagccaagctgttccggcccaggctcatcatc
gctggcaccagcgcctacgctcgcctcattgactatgcccgcatcaagaggctatgtaca
gatattaatgcctacttgctcgcggacatggctcatattagtggcctggtagctgcaaag
gctgtcgcttcaccgtttgaacatgctgacctggtcacttccaccacacacaagtccctc
agaggatccagggctggccttatcttttaccgtaagggcgtccaatcagtggacaagaaa
ggaaaagaaatcatgtacgacctggaagacaaaatcaacttcgcagtatttccctccctg
cagggtggacctcacaaccacgccattgctggagtagcagtggctcttaaacaggctcag
tctcctatgttcagggagtatatagcccaggtactaaagaatgcaaaggctatggctgca
gctcttctcagcaaaggctacactctggtatcaggtggaactgacaaccacctggttctg
gtggacctacggccaaaaggcattgacggcgctcgagctgaaagagtgctggagctcgtg
tcgatcacggccaataagaacacgtgtcctggagacaagagcgcattgacccctggaggc
ctcaggctgggcgctccagctctgacttccagacagttcaaagaagatgactttgtgcag
gttgtcgagtttatggatgagggatttaagatcgctttggatgtcaagaaaaagacagca
aagctccaggacttcaaaaacttcctcctccaggacccagagacagtggcgcgcattgca
gatctgcgacaccgggtggaggcttttgccaggccgttccccatgcctggcttctgcgac
cattag
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