Gambusia affinis (western mosquitofish): 122833883
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Entry
122833883 CDS
T07758
Symbol
cyldb
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase CYLD
KO
K08601
ubiquitin carboxyl-terminal hydrolase CYLD [EC:
3.4.19.12
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04217
Necroptosis
gaf04622
RIG-I-like receptor signaling pathway
gaf04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122833883 (cyldb)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
122833883 (cyldb)
04625 C-type lectin receptor signaling pathway
122833883 (cyldb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
gaf01002
]
122833883 (cyldb)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122833883 (cyldb)
Enzymes [BR:
gaf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
122833883 (cyldb)
Peptidases and inhibitors [BR:
gaf01002
]
Cysteine peptidases
Family C67
122833883 (cyldb)
Ubiquitin system [BR:
gaf04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
122833883 (cyldb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAP_GLY
UCH
HAS-barrel
Motif
Other DBs
NCBI-GeneID:
122833883
NCBI-ProteinID:
XP_043977775
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Position
LG07:complement(5563163..5570700)
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AA seq
772 aa
AA seq
DB search
MRVRINNKSYLLLGTSREEVLRRIWTYLPLSRFNPPNSPGLIQTGNSTFLITERRPDGST
MEPKAASKDRFFIVIRGKSRRGFCRGCIGRVEAETARGELMGVMYGCGSNAGSPKTGGSV
KAEDAYPLTRHQAQLLLYISSPSRRLEMLCNPQLFSAICELTPGDLVVIRYKKGHVPGVV
KNLMQIGKKESKDDLNMLGFQVEFVDTEDNLSPKQLGPLPIFTASDIIQVVPSYSVPLGL
QYRDIKRDGSTGTVVMRINSMPSIGTRRRQPTDGQSERRVVAGQTQSEPPVPLEVGSMVE
VVNNTGVTVYGVIRWLGIPDGKLETWAGVELDYEVTGCSDGVYKGQRYFTCKENCALFVP
VTKCSPDSRFLCSSTETETFKTKEIPPVPAYEESEEDAPPVPESEAASLFVGKMKGIQGH
INSCYLDATLFSLFSSSVTVDAICNKPADKEQPITCILKSIVNRLRRQGFVPAQSVMNVR
KKLGCETFSKNEKDPEEFISVLFQKVLCIEPLLKLRSEGGSSHGAYTLQIFLEKEQMGQT
PTVQKLLDTSCMSGDIKFETMPSCLLIQMPRCGSKYKMFSHIIPSTELDVTDLLYNSPRE
CFICGRMAEFECLQCLPDRKLQSGRIKQYCSTCNTQVHTHRSRCSHSPKALAVPEGVASD
APLPRRTMQLFGVLCIQTSHFVSFVKYGPDPHSWLFFDSMADRHGDDEKGYSVPEVRACP
ELGDFLGQPEEELTRANPALAPELVRRLLCDSYMYLYHSPEMSVSKTSDEEL
NT seq
2319 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtcaggattaataacaagagttatctcctccttggcacgagtcgggaggaagtg
ttgcgtcgcatctggacttatctgccattgagtcgatttaatccgccgaactcacctgga
ctaatacaaactggcaattcaaccttccttatcacggaaaggcgacctgacgggagcacc
atggagcccaaagcagcgagcaaggaccggttcttcatagtcatccgcgggaagtcgcgg
agaggcttctgccgcggctgcatcggtcgcgtggaggcggagacggctcgcggggagctg
atgggggtcatgtacggctgcggctccaacgccgggagccccaagaccgggggctcggtg
aaggcggaggacgcgtaccccctgacccgacatcaggcccagctgctgctctacatttcc
agccccagcagacgcctggagatgttgtgcaacccgcagctcttctcggccatctgcgag
ctgaccccgggcgacctggtggtgatcaggtacaagaagggccatgtccccggggtggtg
aagaacctgatgcagatcggaaagaaggagagcaaggacgacctgaacatgctgggcttc
caggtggaatttgtggacaccgaagacaacttgtcgcccaaacaacttggaccgcttccc
attttcaccgcttcagacatcatccaggtggtcccgtcttactctgtccccctgggactg
cagtacagagacatcaaaagagacggctcaactgggacagtggtgatgcgcatcaactcc
atgccaagtatcgggacgcgcagaagacaacccaccgacggccaatcggagcgacgcgtt
gttgcaggccagacacagagcgagcctcccgtccctctagaggtcggctccatggtggag
gtcgtcaacaacacaggggtcacggtgtacggagtgatccggtggttggggatcccagat
gggaagctggagacgtgggccggggttgagctggactatgaagtgacgggctgctctgac
ggggtgtacaaaggtcagcggtacttcacctgcaaggagaactgcgctttgtttgttcct
gtcacaaaatgcagcccagacagccggttcctctgctcctccacggaaacggagacgttc
aagactaaagaaatccctccagttcctgcatatgaagagtcggaggaagatgcgccgcct
gtccctgagtcagaggcggcgtcgctgttcgtggggaagatgaagggcatacagggtcat
atcaactcatgctatctggatgctacacttttcagtttgtttagttcatctgtgactgtg
gatgccatctgcaacaaaccggctgacaaagagcagccaataacctgcatcctgaaatcc
atagtcaatcgcttgcgcagacaaggctttgtgccagcacagagtgtgatgaacgtccgg
aagaaacttggctgtgagactttcagcaaaaacgaaaaagatcccgaggagttcatttca
gtgctgtttcagaaggtgctctgcatcgagcccctgctgaagctccgatcggagggagga
agctctcacggagcctacacactccagatctttctggaaaaggagcagatgggccagacg
cccaccgtccaaaagctgctggacacgtcctgcatgtcgggtgacatcaaattcgaaacc
atgccgtcttgcctcctaatccagatgccaaggtgtggaagcaagtacaagatgttttct
cacatcattccgtccactgagctggacgtcacagatctcctgtacaactctccacgggaa
tgtttcatctgcggacggatggcagagttcgagtgtctccagtgtttgccagaccgtaaa
ctgcaatcaggaagaatcaagcagtactgcagtacctgcaacacccaggtacacacccac
cggtcgcgctgcagccattctcccaaggcgctggctgtgcctgaaggcgtagccagcgac
gctcctctgccgaggcgcaccatgcagctgtttggtgtgctttgcattcagaccagccac
tttgtgtcatttgtcaaatacggtcctgatccccactcatggctcttctttgacagcatg
gcggacagacacggcgacgacgagaagggctacagcgttcccgaggtccgagcttgtccg
gagctcggcgacttcctgggccagccggaggaggagctgacccgggcgaacccggctctc
gcgccggagctggtccgcaggcttctgtgcgactcctatatgtatttataccacagccca
gaaatgtcggtctcgaagacaagcgacgaggaactgtag
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