Gambusia affinis (western mosquitofish): 122833968
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Entry
122833968 CDS
T07758
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04145
Phagosome
gaf04540
Gap junction
gaf04814
Motor proteins
gaf05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
122833968 (tubb1)
09142 Cell motility
04814 Motor proteins
122833968 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122833968 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122833968 (tubb1)
04147 Exosome [BR:
gaf04147
]
122833968 (tubb1)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
122833968 (tubb1)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
122833968 (tubb1)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122833968 (tubb1)
Exosomal proteins of colorectal cancer cells
122833968 (tubb1)
Exosomal proteins of bladder cancer cells
122833968 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
122833968
NCBI-ProteinID:
XP_043977918
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All DBs
Position
LG07:complement(21822371..21827678)
Genome browser
AA seq
474 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGINAIGLYEGDNNIQLERLNVYFNEAHGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEHVMDRV
RNESESCDCLQGFQLVHSLGGGTGSGMGTLLINKIREDYPDRIMNTFSIMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSLTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTPRGSQQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGVFRGRMSTKEVDEQMLAMQQKNSAYFVDWIPHNVKVAVCDIPPRG
LKMASTFIGNNTAIQEIFRRVGEQFSLMFRRKAFLHWYTGEGMDEMEFTEAENNLNDLVA
EYQQYQDATADLDWEAEEEEEEEGPSTARITKVQSRTETKLETVVETNKETVDE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatctgcaaattggacaatgtggcaaccagatcggctccaagttc
tgggaggttatcagtgaagaacatgggataaatgcaataggcctctacgaaggagacaac
aacatacaactggagaggctcaacgtctactttaatgaggcacacggtggtaaatatgtc
cccagggcattgcttgtggacctggagcccggcactatggacagtgtcagaggaagtcgc
atcggtgctctttttagaccagacaatttcatccacggaaactcaggagctggaaacaac
tgggcaaagggccactacacagagggagcggagctggtggagcatgtcatggatcgggtc
aggaacgagagtgaaagctgtgattgcctccaaggctttcagctggttcactcgctgggg
ggaggcacaggctccggcatgggtaccctcctcatcaataagatcagagaggactaccca
gaccgtatcatgaatacctttagcatcatgccatctcctaaagtctcagacacagtggtg
gagccttataatgctacactctctgtgcatcagctcttagagaacacagacgagactttc
tgcattgacaacgaggccctttacgacatctgtttccgtaccctaaaactgactacacca
acttatggggatctcaaccacttggtctccttgactatgagcggggtcacaacctctctc
agatttccaggacagctcaatgctgacctgaggaagctggctgttaacatggtgcccttc
ccccgtcttcatttcttcatgccaggcttcgccccactgacacctcggggtagccagcaa
tacagagctctcactgtacctgaacttacccagcagatgtttgatgcccgcaacatgatg
acggcatgcgacccacggcgagggcgctacctcacagtagctggtgtctttcgaggtagg
atgtccacaaaagaggtggatgagcagatgctcgcaatgcaacagaaaaacagtgcctat
tttgtcgactggatccctcataatgtaaaggtggctgtgtgtgacatcccacctcgaggt
ctaaaaatggcttccacattcattggaaacaacacagcaattcaggagatattccgtcgg
gtgggcgagcagttctccctcatgttcagacggaaggcgttcctccactggtacacagga
gagggtatggatgaaatggagttcacagaggctgagaataacctcaacgacctggtggca
gagtaccagcagtaccaagatgcaactgctgatctagattgggaagcagaagaagaagaa
gaagaggaaggaccctcgactgcaaggatcacaaaggttcagtctcggacggaaaccaaa
ctggaaacagtggtagaaaccaacaaagaaactgtagatgagtag
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