Gambusia affinis (western mosquitofish): 122833984
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Entry
122833984 CDS
T07758
Symbol
rbck1
Name
(RefSeq) ranBP-type and C3HC4-type zinc finger-containing protein 1
KO
K10630
RanBP-type and C3HC4-type zinc finger-containing protein 1 [EC:
2.3.2.31
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04217
Necroptosis
gaf04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
122833984 (rbck1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122833984 (rbck1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122833984 (rbck1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
122833984 (rbck1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
122833984 (rbck1)
Multi subunit type E3
LUBAC complex
122833984 (rbck1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-RING_2
zf-RING_5
zf-C3HC4_2
Zn_ribbon_RanBP
zf-C3HC4
ubiquitin
zf-RING_11
IBR
zf-C3HC4_4
Motif
Other DBs
NCBI-GeneID:
122833984
NCBI-ProteinID:
XP_043977948
LinkDB
All DBs
Position
LG07:22421089..22427905
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AA seq
514 aa
AA seq
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MASEISPKGNIKEAEALALSLGEAISSGDSEEAVELCKKLSQLSVEVSVNIKSHVYPQDS
FRLMVGVQDAESEDYIPVTLIVSTGMTIAEVKDKINQDFGFHPTLQRWVIGKRLAQDQET
LYSHGIRKSGDQAFLFILSANAAQLTRQQHNQEQEQQRIAGIVESLPSLQLHCRGVGSGD
KTVPPPVPPKNVTPPKPAPKPQLGWACTMCTFLNKPTRPGCEMCGAERPQDYEVPDVYQP
DQDEVLRIRQEQLALLQYEQAQQLEREQNYLYLLATDDHNLITNTTETDCPICFSTLEPG
DGVVLRECLHTFCRECLKGTVINSQDAEVSCADTDCESKLLDREIKELLTEEEHQRFLEL
RLSIAESRSEHSFHCQTPNCRGWCVYEDDVNEFHCDLCNETNCILCRAIHKDMNCKDYQD
DLRIRAENDEAAQKTKQMLENMLQNGEAMKCPRCDIIVQKKDGCDWICCLMCKTEICWVT
KQARWGPKGTGDISGGCKCRVNNQPCHPNCQNCH
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atggcctctgaaatttcacccaaagggaacataaaagaagcagaggcgctggccctctcc
ttgggtgaagccatcagcagtggagactctgaggaggcagttgagctgtgcaagaaactt
tcccagctctctgttgaagtgtcggtcaacatcaagagccatgtctaccctcaggactcg
ttcagattgatggttggtgtgcaggatgcggagtcagaagactatatcccagtaaccctt
attgtttccactggcatgacaattgcagaagttaaagataagattaatcaggactttggg
ttccaccctacactccagcgctgggtgatcggtaaacgcttggcccaagatcaagaaaca
ttatacagccacggcatccgcaagagcggagatcaggctttcctgtttatcctctctgcc
aatgcagcccagcttacacggcagcaacacaaccaggaacaggaacaacagcgcatagct
ggtattgtggaatctttgccatcattgcagcttcattgtagaggcgtaggcagtggcgac
aaaacagttcctcctcctgttcctcctaaaaacgtgactcctcccaaacctgctcctaaa
cctcagttgggctgggcctgcacgatgtgcacttttctcaacaaaccaacacgccctggc
tgtgagatgtgtggagcggaaagacctcaggactatgaggtaccagatgtctatcagcca
gaccaggacgaagtcttgcgcattcggcaagagcagctggctttactgcaatatgaacag
gctcagcagctggaacgtgagcagaactatttgtacctgttggccacagatgaccacaac
ctcatcactaacaccacagagacagattgccccatctgtttctccactctggagccagga
gacggggttgtgctcagagaatgtctgcacactttctgcagggagtgtcttaaagggaca
gtcataaacagccaggatgcggaggtatcttgtgcggatacggattgcgagagcaagtta
ttggatcgagaaattaaagagctgctcacagaggaggagcaccagcggtttttggagctg
cgcttgagcattgcagagagtcgctctgagcacagcttccactgccagacccccaactgt
cgagggtggtgcgtctatgaggatgatgtcaacgagttccactgcgacctctgcaatgag
accaattgcatcctctgccgagccatccacaaagacatgaattgcaaggactatcaggat
gacctgcgcatccgagcagagaacgatgaagcagctcagaagacaaagcagatgctggag
aacatgctgcagaatggagaagccatgaaatgcccacggtgtgacatcatcgtccagaaa
aaggatggctgtgattggatctgttgtttgatgtgcaagacggaaatctgctgggtcacc
aaacaagcccgatggggaccaaaaggaactggcgatatatccggtggctgtaaatgtcgg
gtcaacaatcagccttgtcatcccaattgccaaaactgtcactga
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