Gambusia affinis (western mosquitofish): 122834134
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Entry
122834134 CDS
T07758
Name
(RefSeq) contactin-4
KO
K06761
contactin 3/4/5/6
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122834134
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gaf00537
]
122834134
Cell adhesion molecules [BR:
gaf04515
]
Immunoglobulin superfamily
Contactins
122834134
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
gaf00537
]
Others
122834134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Pur_ac_phosph_N
Ig_4
Tissue_fac
Interfer-bind
Motif
Other DBs
NCBI-GeneID:
122834134
NCBI-ProteinID:
XP_043978218
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All DBs
Position
LG07:1458739..1586430
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AA seq
1029 aa
AA seq
DB search
MKMLLPWELLILLSLKECLAENARHGPVFTQEPSDSIFPMSSGDKLVFINCKAKGNPPPH
YRWKVDGRDIDSGSDQSYSLVEGNLLINNPHFINHGGVYQCIATNAFGTIVSREAKVQFA
FLQNFSQKPRNTVTVREGQAVVLLCGPPPHYGEIKYSWVFNGNRSFLQQDARRFISQRTG
NLYVAKVEASDAGNYTCVVRNMMTNATVFSSPTPVVVRGDVVMGEYEPKIEVQFPDTLYV
SKGSSVKLECFALGNPVPSISWRRADGNPLPGKIKINHSTGDLEIPYFRPEDAGVFECVA
ENSRGKNVARGQLIFQNVEHLQWTQILKDAHMAIDANLQWECKAIGKPKPKYRWLKNGQP
LTTKERVHIEAGRLTISTIRLSDSGMYQCVAENEYGSLYASAELKVVASPPDFTQRPVKK
STVIHRGGEVVLECRPNASPRATISWWRGAELLRTGKRQMILQDGTLRIANISKADEGSY
TCVARNHFGASSSTGDLVVKEPTRIVVPPLSSDASVGQSLVLPCQVSSDSSLSPVFKWFF
NGKAIDFSRQEHFEMIGGGFAGDLMVRNIQLRHSGKYVCMVHTDVDTVSAAADLIVRGPP
GAPQGLLVTAITNTTAQLSWSSGPDNHSPITMYMVQARTPFSIGWQTVKTVPDSVPGQMM
HATVKDLSPWVEYEFRVLAINSVGVGEPSMPSKQIRTKAAAPKVAPVNVSGGGGARGELV
ITWEPVPEEQQSGEEFGYLVAFRPLGSSTWIKTVLASADVSRYVYRNDSVAPLSRFEATV
GVFNSMGEGPFSRIVKVFSAEEEPSAAPSRVWAHSISASEIEVYWEPVPPRSSTENIIGY
EVLFWEGSSEQREADRVRVTDSSALLSGLKSSTVYMISVRAQNSAGLGPSSPSISVATKK
PPPSQPPGAIEWNLTNSKIFLKWEHVKASQNESEVTGYKVVYRQSWYGRTTVLQTNKTSI
ELRVPYGEDHIIEITALTEGGHGTSSGPIHIPKMSSLNSKGCVARIPAKTYCLIPFGLHL
LIHLLMLLC
NT seq
3090 nt
NT seq
+upstream
nt +downstream
nt
atgaagatgttgttgccatgggaactcttaatccttctgtcactcaaagagtgccttgcc
gagaacgcccgccacggtcctgtctttacccaggagcccagtgacagtattttccccatg
agctccggcgacaagctggtgttcattaactgcaaagcgaagggtaacccacctccacac
tacaggtggaaagtggatgggagggacatagactccggctcggaccagagctacagcctt
gttgaagggaacctgctgatcaataatcctcattttatcaatcacggaggcgtctatcag
tgcatcgccaccaacgcgtttggaaccatcgtcagcagggaggcaaaggtccagtttgca
tttctgcagaacttcagccagaagccgcggaacacggtgacggtgagagagggtcaagct
gtggttctcctctgtggcccgccgccccattacggagagatcaagtattcctgggttttc
aatggcaaccgcagcttcctccagcaggacgcccgccgtttcatctcccagcggacgggc
aacttgtacgttgccaaagtggaagcctcggacgccgggaactacacgtgtgtagtgaga
aacatgatgaccaacgccacggtgttcagctctccgaccccggtggtggtgcggggtgac
gtggtgatgggggaatacgagcccaagatcgaggttcagtttcctgacaccctttacgtt
tccaaaggatcgtcagtgaagctggaatgcttcgccctaggaaaccccgtgccatccatc
tcctggaggagagccgatggaaacccactccctgggaagattaagatcaaccactccacc
ggagatctggaaattccatattttcgcccagaggatgccggtgtgttcgagtgtgttgct
gagaacagcagagggaagaatgttgcccgagggcagctgatattccagaatgttgaacat
cttcagtggactcagatcctgaaagatgcacatatggccattgatgccaacctgcagtgg
gaatgtaaagccattggtaaacctaaacctaagtatcgatggttaaagaatggtcaaccg
ctgacaacaaaggagagagttcacattgaagctggcagactgaccatatctacgatccgt
ttgtcagactcagggatgtatcagtgtgtggcagagaatgaatatggatcactgtatgcc
agcgctgagctcaaggttgtagcttcaccgcctgactttacccagcggcccgtgaaaaaa
tccacagtgatccatagagggggagaggtggtgttagagtgccggcccaatgcgtccccc
agggccaccatctcctggtggagaggggccgagctcctgaggaccggcaagagacagatg
atcctgcaggacggcacgctgcgtatcgctaacatctccaaggcggacgagggcagctac
acatgtgtggccagaaaccatttcggagcctccagcagcacaggggatctggtagtgaaa
gagcccaccaggattgtggtcccacctctaagctcagacgccagtgtgggacagagcctg
gtcctgccctgccaggtgtccagcgactcgtccctcagtcccgtcttcaagtggttcttc
aacggcaaggccatcgacttcagccggcaggagcactttgagatgattggtgggggattt
gcaggtgacctgatggtgaggaacatccagctaaggcactctggaaagtatgtgtgtatg
gtacacactgacgtggacacggtgtcggcagcggcagatctaattgttagaggacctcct
ggtgcccctcagggtctgctagtgaccgccattaccaacactacagcgcagctgtcctgg
agctctggaccagacaaccacagtcccatcaccatgtacatggttcaagctcggaccccc
ttctctattggctggcagacagtgaagacagttcctgattctgtccctggacagatgatg
catgcaactgtgaaggatttgagcccctgggtggaatatgaattcagggtgctggcaatc
aacagtgttggtgttggagaacccagcatgccgtcaaaacagatccgaaccaaagcagca
gctcccaaggttgcaccggttaatgtgagtggcggtgggggagctcgaggagagcttgtc
attacgtgggagccggttccagaggaacagcagagcggagaggaatttggctatctcgtg
gctttccgcccgctcggcagcagcacctggatcaagacggtgctggcctcagccgacgtg
tccagatacgtgtacaggaatgacagcgttgcaccactgtcccgtttcgaagccactgtg
ggtgtgttcaacagtatgggcgaggggccgttcagtcggatcgtgaaagtgttctctgca
gaggaagagccttctgctgctccatcgagagtatgggctcattccatatctgcctctgag
attgaggtgtactgggaaccagttcctcccaggtccagcactgagaacatcatagggtac
gaggttctcttttgggagggaagctctgagcagcgtgaagcagacagggtgagggttacc
gacagctcggcgctgctctccggtttgaagagcagtacagtctacatgatctcagtgaga
gctcagaacagtgccggacttggaccctctagcccctccatcagcgtcgccaccaagaaa
ccaccaccaagccagcctccaggggccattgagtggaacctgaccaactcaaagatcttt
ctgaagtgggagcacgtcaaggcgtcgcagaacgaatccgaggtgacgggatacaaggtt
gtgtatcgccagagctggtatggaaggactacagtactgcaaaccaataagaccagcatt
gagctgcgggttccttatggggaggaccacatcattgagatcacagcgctgactgagggg
ggccatgggaccagcagcggtcccattcacataccaaagatgtccagtctgaattcaaaa
ggatgtgtggctagaatcccagcgaagacgtactgtttaatccccttcggacttcattta
ttaatccatctactgatgctattatgctga
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integrated database retrieval system
