Gambusia affinis (western mosquitofish): 122834324
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Entry
122834324 CDS
T07758
Name
(RefSeq) cadherin-4-like isoform X1
KO
K06797
cadherin 4, type 1, R-cadherin
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04514
Cell adhesion molecule (CAM) interaction
gaf04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
122834324
04519 Cadherin signaling
122834324
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
gaf04515
]
122834324
Cell adhesion molecules [BR:
gaf04515
]
Cadherins
Major cadherins
122834324
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_FAT4_N
Ig_CLSTN
F59B103_C
NCMAP
Stevor
Motif
Other DBs
NCBI-GeneID:
122834324
NCBI-ProteinID:
XP_043978599
LinkDB
All DBs
Position
LG07:complement(6030278..6331802)
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AA seq
939 aa
AA seq
DB search
MFFWFVCLFAKMIAGCILLACTVLVGASSGSRAGQPLKPPCRPGFSQNFYTVIVPRDVLH
GQSILRDTILSSKRVKFEDCQHSREVGFVSSDPNFSVRPDGSVYTEQEVANLSEPVQFMV
TARGLHDPHIWETTVKLALAGHLHPLPLTKIGFEEMLSRVWESQPRVIKFSRRHQRSSSA
NSLRRQKRDWVIPPINVPENSRGPFPHMLVRIRSDQDKDVGIRYSITGAGADQPPSGIYN
IDPINGNMFVTQPLDREERASFHLRAHAVDMNGNQVENPIDLYIYVIDMNDNRPEFQNQV
YNGSVAEGSKPGSSVMQVTATDSDDSTTANGMVRYRILSQTPHSPIPNMFTINSETGDIV
TVAAGLDREKVSQYTIIVQATDMEGNLNFGLSNTATALISITDINDNPPELTVRTFSGEV
PENKVNVVVTNLTVVDRDQPHSPNWNAVYRIVSGDPSGHFTVRTNPITNEGMLTVVKPVD
FEMNRAFMLTVVVSNQAHLASGIQSSLQSTAGVTISVQDVNEPPVFPVNPKTIRFEEGVP
AGTTLTVFAAQDPDHFIHQIVRYSKLSDPANWLKINRTNGQITTMALLDRESMYVKNNMY
EATFLAYDNGKSGSPQASGTGTLQIYLIDVNDNAPVLIPKEAQICERARPNSRINITASD
ADAEPNVGPFVFELPSFPASIRRNWTISRLSGDYAQLRLRIPYLEAGVYVIPVIVSDSGN
PPLSNRSMIRIKVCPCDNNGDCSATGAVAAAGLGTGAIIAILMCIIILLSMVLLFVVWMK
RREKERQAKPLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQLQQPESLDHIISKPTGVR
RVDERPVIAESQYPVRPSVPHPGDIGDFINDGLRAADNDPTAPPYDSLLVFDYEGSGSTA
GSVSSLNSTSSGDQDYDYLNDWGPRFKKLADLYGGGADD
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgtttttttggtttgtttgcttgttcgcaaagatgattgctggctgcatcctgttggcg
tgcaccgtactcgtgggcgcatcctcggggagcagggcgggtcagcccctgaagcctccc
tgcagacccggcttctctcagaacttctacacggtgattgtccccagagacgtactacac
ggccagagcatcctcagagataccatcctgtccagcaagcgtgtgaagtttgaggactgc
caacacagcagagaggtgggctttgtcagcagcgaccccaacttcagcgtgaggcccgac
gggagtgtgtacacagagcaggaggtggccaacctctccgagcctgtccagttcatggtg
acggcgcggggactgcacgacccgcacatctgggagaccaccgtgaagctcgcccttgcc
ggacatcttcaccctctgccgctaacaaagatcggctttgaagaaatgctgtcacgggtg
tgggagtcccaacccagggttatcaagttctctcgaagacatcagagaagttcctctgcg
aacagcttgaggcggcagaagagagactgggtcatcccacctatcaacgttcctgaaaac
tcccgaggacctttcccacacatgcttgtcaggatccgctcggatcaggacaaggacgtc
ggcatccgctacagcatcacgggcgccggcgccgatcagcctccgagcggaatctacaac
atagaccccatcaacggcaacatgttcgtcacccagcccctggaccgcgaggagagagcc
tccttccacctgcgagcccacgcggtggacatgaacgggaaccaggtggagaacccgata
gacctgtacatctacgtgatcgacatgaacgacaacagacccgagtttcaaaaccaggtt
tacaacggctcggtggccgaggggtccaaaccaggctcgtctgtgatgcaagtgacggcc
acggattcggacgactccaccacggccaacggcatggtgcgctaccggatcctctcgcag
accccccacagtcccatccccaacatgtttaccatcaacagcgaaacgggagacatcgtt
accgtggccgccggactggacagagagaaagtgtcgcagtacaccattatcgtccaggcc
acggacatggagggcaatctgaactttgggctctccaacacggccacggcgctcatatcc
atcaccgacatcaacgacaacccaccagaactgacagtccggacgttttccggtgaggtg
ccggagaacaaggtgaacgtcgtggtaaccaacctgacggtggtggaccgggatcagccc
cacagcccaaactggaacgctgtctatcgaatcgtcagcggcgacccgtcgggacacttc
accgtccgcacaaatcccatcacgaatgagggaatgctcacggtggtcaagccggtggat
ttcgagatgaaccgcgccttcatgctgacggtggtggtgtccaaccaggcccacctggcg
agcggcatccagtcctcgcttcagtccacggcgggggtcaccatctctgtgcaggatgtc
aacgagccgcccgtcttccccgtcaaccccaagacgatccgtttcgaggagggcgtgccg
gcggggaccacgctcacggtgttcgcagctcaggaccctgaccacttcatccaccagatc
gtcaggtactcgaagctctccgacccggctaactggctgaagatcaacagaaccaacggt
cagattaccaccatggccttgctggacagggagtccatgtacgtcaaaaacaacatgtat
gaggccacgttcttggcgtacgacaatggtaagtctggttcgccccaggccagcggtacc
gggacactccagatctacctgattgacgtcaacgacaacgctcccgtgctgatacccaag
gaggcgcaaatctgcgagcgagcccggcccaactccagaatcaacatcacggcttcggat
gccgacgccgagcccaacgtcgggccgtttgtcttcgagctgccttcgtttcctgccagc
atccggcggaactggaccatctccagactgagcggcgactacgctcagctcagactgagg
attccttacctggaggcaggcgtctacgtgatcccggtcatagtgtctgactctgggaac
ccgcctctgtccaaccgctccatgatcaggatcaaagtgtgtccctgcgacaacaacggg
gactgcagtgccacgggggcagtagcggccgctggcctcggcaccggagccatcatcgcc
atcctcatgtgcatcatcatactgctgagtatggttctgctgtttgtggtgtggatgaag
cgcagagagaaggagcggcaagcgaagcccctgctgatcgacccagaggacgacgtcaga
gacaacatcctgaagtatgatgaagagggaggtggagaggaagaccaggactacgacctg
agccagctgcagcagccggagtctctggaccacatcatcagcaagccaacgggggtgcgc
cgggtcgatgagaggcccgtgattgctgagtcgcagtaccctgtcagacccagcgtgccc
caccctggggacataggagacttcataaacgacggtctgagggccgccgataacgacccc
accgccccaccgtacgactccctgctggtgttcgactatgagggtagcggttcgaccgcc
ggctccgtcagctcgctcaactccaccagctcaggagaccaggactacgactacctcaac
gactggggtccgcgtttcaagaagctggcagatctctacgggggaggagcggacgactga
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