Gambusia affinis (western mosquitofish): 122834362
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Entry
122834362 CDS
T07758
Symbol
tmf1
Name
(RefSeq) TATA element modulatory factor
KO
K20286
TATA element modulatory factor
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122834362 (tmf1)
Membrane trafficking [BR:
gaf04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
122834362 (tmf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
ATG16
Motif
Other DBs
NCBI-GeneID:
122834362
NCBI-ProteinID:
XP_043978676
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All DBs
Position
LG07:complement(7902548..7913758)
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AA seq
1147 aa
AA seq
DB search
MSWFNASHLSSFAKQALTTAQKSIDRVLDIKEEDQWGDTVVMPYDETTSPGKVSVSGGWG
MTEWEAPAEEKATTPPLNSEAITTPVTRTVVDESENFFSAFLSPGDVPVTKAKVVSVPPA
KSQRRTQETEKKSQGALLQIQNEDGIAELTEPTEQSVESQTVVDGQPDEAESSPAAPYAD
AIFLQPVSPVASPGDHTFSPDCVKTDAESVPSESKTEPEPEDPPEQQVETDSPNSSESPP
SEAKSFTPADPASPTSTKEVLPDQKDTKPEDRQNDTPSPPVSAFSSGTSTTSDIEVLDHE
SVQSESSASSRQETGESKTGLHLMQGSFQLLTASTCGDFARLEDYHKLTESCGSSSDAFE
RIDSFSVQSLDSRSVSEVNSDDEIPGSRTLASVTAGPAPPTETCPKQEDGAEENAGEEND
CKEEGYVETGKEQSLDEMEESGRSATPVNSEQPDELCTGVDDDAIFGSTCNEEEKSTTPI
TEEMKSVSPAQILELQKVIDDLSSRLEKRESQLLAVSKDKARLEEECDNLKDEVISLKEE
SSTVQSLKDEFTQRIADAERKAQLACKERDIAKKEIKGLREELSTRLNSSDTMELIREKE
EQIRGLLEEGEKLSKQQLQHSNIIKKLRVKEKECDGRITKQQKKIKEQEEELRHLQQVLD
GKEEVEKQHRENIRKLNGVVEQQEKELSRLQTDDEELQEKNRSLQAALDSSYKELAELHK
AHASRASEAEEAALSREIQAKEQLSLALETAQEEARIQQEALANQVADLRIALQRTEQQQ
ARKEDYLREEISELQQRLQEAETRNQELSQSVTSATRPLLRQIENLQASLGGQTASWEKL
EKNISDRLADAQTQLAVAVEKERSAAEELLSIKSQLASLESQNSLLRQEKARVLAQLEAE
KSKREKLEDESSREHAELTNLKGEHSRMLEEAKKEKLLLTNQLEMEKMKVEQEKKKCYLA
QEALKEKERKAVTHPVGDPPAASTPSLSRSSSVSGMENAGLHTSVLSQEDYLDHSMGAIT
MSMSGTNLYEAARLSGGSSIMENLHSQLKLREGEIAQLQLEIAGLERSRSVMAEELVRLT
NQNDEMQEKVKDIPKLKIQLKDLEQRHNTILQMYGEKAEEAEELRLDLEDVKNMYKTQID
ELLKNQK
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atgagttggttcaacgcgtctcacctgtccagcttcgctaaacaagctttaacgacagcg
cagaagtcgattgaccgagttctggacatcaaagaagaggaccaatggggtgacacggtt
gtaatgccttacgacgaaacaacatcccctgggaaggtgtcagtgagtggaggatggggt
atgactgagtgggaagcccccgctgaagaaaaggccaccactcctcccctcaactccgag
gccattactacgcccgtcactcgcacagttgtggatgaatccgaaaactttttcagtgcc
tttctgtcgccaggagatgttccagtgaccaaagcgaaagttgtgtctgtaccccctgca
aagtctcaaagacgaactcaagagacggagaagaaaagccaaggagctttgctgcagatc
caaaatgaggacgggattgcagagctaacagaacctacagagcagagcgttgagagtcag
acagtggtcgacggccagccggatgaggccgagtcctcaccagcagcgccttacgctgat
gccatctttctccagccagtttctccagttgcctcccctggtgaccacactttcagtcct
gactgtgtgaaaacggatgctgagtcggttccatcagagtccaaaacggagccggaacca
gaagatccacccgaacaacaagtagagacggattccccaaactcctctgagtctcctcct
tctgaagctaaaagctttactccggcggaccccgcaagccccacgtccaccaaggaagtt
ctcccggatcaaaaagacaccaaaccagaggaccgtcagaacgacacgccctctcctccg
gtcagcgctttctcctcaggaacttccaccacaagtgacattgaagtgctcgaccacgag
agcgtgcagagcgaaagctcggccagctctaggcaagaaaccggcgagagcaaaaccggg
cttcacctgatgcagggctcctttcagctcctcactgcctccacctgcggggatttcgct
cgactggaagactatcacaaactcacggagagctgcggctcctcctcggacgcgttcgag
cgcatcgattcgttcagcgtgcagtcgctggacagccggagtgtcagcgaggtgaactcg
gacgacgagatccccggcagccggactctggcctccgtcacggcgggacccgctcccccg
acggagacgtgtccgaagcaggaggacggagcggaggagaacgctggcgaggagaacgac
tgcaaggaggagggatacgtcgagacggggaaggagcagtcgctggacgagatggaggag
agcggacggagcgcaactcctgtaaacagcgagcagccagacgagttgtgcactggtgtt
gatgatgatgcgatatttggttctacctgcaacgaagaagaaaagagcactactccaatc
acagaagaaatgaaaagtgtctcacctgcccagatactggagctgcaaaaggttatcgat
gatctgtcaagccgccttgagaagagagagtctcagctgctggctgttagcaaagacaag
gccaggctggaggaggagtgcgacaatttaaaagatgaagtgataagcctgaaggaagag
agctccactgtgcagtccctgaaagacgagttcactcagcgcatagcggacgcagaaaga
aaggctcagctggcctgcaaggagagggacattgccaaaaaggagatcaaaggcttgcga
gaagagcttagtacaagactgaactctagtgatacgatggagctcatcagagagaaggag
gagcagatcagaggtctgctggaagagggtgaaaaactgtcgaaacagcagctgcaacac
agtaacatcatcaagaaactgcgtgtgaaggaaaaagagtgtgacggcaggattaccaag
cagcaaaagaaaatcaaggagcaagaggaggagcttaggcatctgcagcaggttctggat
gggaaggaggaggtggagaagcagcacagagagaatatcaggaagctgaacggtgtggtg
gagcagcaggagaaggagctgagcaggctgcagacggatgacgaggaactgcaggagaaa
aacaggagcctccaagctgccttagacagctcttataaagagctggcagagcttcacaag
gctcacgctagcagagcgagcgaggccgaagaggcggctctaagcagggaaatccaggcc
aaggagcagctgagtttagctcttgaaacggctcaggaggaggccaggatccagcaggag
gcacttgccaaccaggtggctgacttgaggatagctctgcagaggacggagcaacagcag
gccaggaaggaagattatttgagggaggagatcagtgagcttcagcagagactgcaggag
gcagagaccaggaaccaggagctcagccagagcgtcacctcagcaacgcggcctctgctg
cggcaaatcgagaacctacaagcctcgctgggcggacaaactgcgtcctgggagaaactg
gagaagaacatttccgataggctagcggacgcccagactcagctggctgtcgccgtggag
aaggagcgatcggcagcagaggaactgttgtccatcaagtcccagctggcttcattggaa
tcccagaattccttgctccggcaggaaaaagccagagtcttggctcagctggaggcggag
aaaagcaaaagggagaaactggaggatgagagcagcagggagcatgcggaactgacaaac
ctgaaaggagaacacagtcggatgctagaagaggccaagaaagaaaagctactgctgacc
aaccagctagagatggaaaagatgaaggtggagcaagagaagaagaaatgctatctcgca
caagaagcgctaaaggaaaaggagcgtaaagctgtaacacatcctgttggagatccacca
gcggcttccacgccgtccttgtcccgctccagctccgttagcgggatggaaaacgctgga
ctgcacacctcggttctgtcgcaggaggactatttggaccactcaatgggagcaatcacc
atgtcgatgagtggaaccaacctatatgaggcagccaggttgtctggaggctccagcatc
atggagaacctccactcccagcttaaactgagagaaggagagatagctcagttgcagctt
gagatcgccggtttggagagaagtcgctcagtgatggcagaagagctggttcggctcacc
aatcaaaacgatgagatgcaggagaaagtgaaggacatcccaaagttgaaaattcaactc
aaggatctggagcagaggcacaacaccatcctgcagatgtatggagaaaaggctgaggaa
gcagaggaactgagactggacctcgaagatgtcaaaaatatgtataaaactcagattgat
gaattactaaagaatcagaaataa
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integrated database retrieval system
