Gambusia affinis (western mosquitofish): 122834440
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Entry
122834440 CDS
T07758
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2 isoform X1
KO
K10409
dynein axonemal intermediate chain 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122834440 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
gaf03037
]
122834440 (dnai1.2)
04812 Cytoskeleton proteins [BR:
gaf04812
]
122834440 (dnai1.2)
Cilium and associated proteins [BR:
gaf03037
]
Motile cilia and associated proteins
Dynein arm
122834440 (dnai1.2)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
122834440 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
WDR55
Beta-prop_HPS5
Beta-prop_RSE1_2nd
EIF3I
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
122834440
NCBI-ProteinID:
XP_043978817
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All DBs
Position
LG07:9488530..9509067
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AA seq
688 aa
AA seq
DB search
MASRRMSTIHKLPGQKLSRSIKDDDDAWDGTDGLDDSFHSKSAADHHHHHHCHHHHHQLD
LSEAELKEEVTRVLNANNPHAPKNLVRYSFKERFYKPVTAVDHLAVHFALDGNLLHKDSD
EARRLSIFQLPTGLVPVETKVEDHAETPTTPVEDGAESEETGDEDKPHRTSSKRRKREAK
ITNQFNFSERAGQTRNNPSRERSCQTEPPPRITFSGTANQWEIYDAYFQKLQKQDKIEKK
KKTTPEKKENFEVRKKSLLDTGNEEFAKVGRVAVIVERIVIQNTMDDIAQDFKYFEDASD
EFRDQEGTLLPLWTFQYEKARHLSVTALCWNNKYQDLFAVGLGSYDFGKQEGGMLLFFSL
KNSAFPEYIYSTASGILCLDIHPQLSYLVAVGFYDGCVAVYNLKEETVHPVYKSTASTGK
HTDPVWQVRWQNDDMDNNHMFCSVSSDGRVVAWTLVKNELMSSDIIRLSVKGAPSDGSDG
SQLTVISRGTSLDFHKQIDYLFLVGTEEGKIYKCSKTYSSQFLETYDAHRMPVDTVKWNH
FHPKIFISCSSDWNVKIWDHTVNTPMFTFDLGAPIGDVCWAPYSSTIFAAVTIDRKVHVF
DLSINKFEGICHQIVVAKKTRLTHIEFNPIHPIIIVGDDRGTVTSLKLSPNLRKKPKSKK
GQELPKGSEAEVLKMDRLLSLLREPELD
NT seq
2067 nt
NT seq
+upstream
nt +downstream
nt
atggcatctagaaggatgtccactattcacaaattgcccggccagaagttatccagatct
ataaaggatgacgatgacgcatgggatgggactgatggcttggacgactctttccattcg
aaatccgctgcggatcatcatcatcatcaccattgtcatcatcatcatcatcaactggac
ctctcagaggctgagctgaaagaggaagttacaagagtcctaaatgcaaacaacccacat
gctcccaaaaatcttgtgcgctacagcttcaaggaacgtttctataagccggtgactgct
gtggatcacttggctgtccactttgctttggatgggaacctactgcataaagactctgat
gaagctcgaagacttagcatctttcagcttcctacagggcttgtaccagtggagactaaa
gtagaggatcacgctgaaaccccgacaacacctgtggaggatggggccgaaagtgaagaa
actggagatgaggacaaaccacatcgtacttcctcaaaacgtcgcaagagggaggcaaaa
ataacaaatcaattcaacttcagtgaaagggcaggacagactcgcaataatccttcaagg
gaaagaagctgccagactgaacctcctccccgcatcaccttttctggcactgctaatcag
tgggagatctacgatgcatactttcagaaactgcagaagcaagacaagattgaaaagaaa
aagaaaaccacaccagagaaaaaagagaattttgaagtcaggaaaaagtctttgttggac
accgggaatgaggaattcgctaaagtgggcagggtagccgtgatcgttgaacgaatagtc
atccaaaatacaatggatgacatagcacaagattttaagtactttgaggatgcctcagat
gagttcagagaccaggagggaactcttctgcctttgtggacgtttcagtatgaaaaagcc
aggcatttgtctgtcactgccctctgctggaataacaaataccaggacctgtttgctgtg
ggattaggatcatatgactttggtaaacaggagggcggcatgctgctcttcttctcattg
aagaactcggcttttccggagtacatctactccacagcttctgggatcctctgcctggac
atccatccacaactctcgtatttggtggcagtgggtttctacgatggctgtgtggccgtt
tacaacttgaaggaggaaacagtacaccctgtttacaagagtaccgcaagcaccggaaag
cacacagatcctgtctggcaggtgcgctggcaaaacgatgatatggacaacaaccatatg
ttttgttcggtgtcatctgatggcagagttgtggcctggacacttgtcaagaatgagctc
atgtcatcggacattatcagactgtctgtgaaaggtgctccatctgatgggtcggatggt
tcacagctgactgtcatctctcgtggtacatcactcgacttccacaagcagattgactat
ctgttcttagttggcacagaagaggggaaaatatataagtgctccaagacttactccagt
cagttcctggagacatatgatgcccatcgtatgccagtggatactgttaagtggaaccac
ttccatcccaaaatttttatttcttgcagttcagactggaatgtcaaaatctgggaccac
accgtcaacactccaatgttcacctttgaccttggcgcacccattggagatgtttgctgg
gccccttactcctccactatattcgctgctgtgacaatagacaggaaggttcacgtcttt
gacctgagtatcaacaaattcgaagggatctgccatcagatagtggttgccaaaaagacc
aggctgactcacattgaatttaatcccatccatcctatcatcattgtgggggacgaccgg
gggactgtgaccagcctcaagctctctccaaacctccgcaagaagcccaagagcaagaag
ggccaggagctgcccaagggttcagaagcagaggtattaaagatggataggctgctcagc
ctgctgagagaaccagagctagactga
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