Gambusia affinis (western mosquitofish): 122834449
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Entry
122834449 CDS
T07758
Symbol
ube4b
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
gaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122834449 (ube4b)
04120 Ubiquitin mediated proteolysis
122834449 (ube4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122834449 (ube4b)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122834449 (ube4b)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
U-box type E3
122834449 (ube4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
122834449
NCBI-ProteinID:
XP_043978836
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All DBs
Position
LG01:8859879..8876661
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AA seq
1377 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLSTPLTSPQRETPPGPLPGPSGVSPQPVPPAA
SQSLGLNVHSGTPATSPMGTSGVAYGSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDID
PASCEKSMSQVDVDSGIENMEVEDSDRREKRNLTEKETSANSDVSEDQALHLICKILRVS
WKEQDRDVIFLPSLAADFHQNPKDVYSDFKDLISQILMEVLMMSSQSNVHNPFASLTATS
QPIAAAKSSEHRLTLVQPSSQGGSPMGPSAGSFGASSLSSLYGCDSPHPMALNAAERTCP
SLSTPPAPAPPCTPQFVVPPSPPATAAIRQSLNPSSTPMPISQRYRPYSVTTPWVASTPM
SPVYRGYSFPGLSPSPAAPSVPPNTPLPATPLSPQSLLLSSPSSGIHPPSPPLPVVPPSP
RPSSRQAAFAARIPSSSPLSFLFFALSDMSQDSSDEESEEEEEDFAQVQFGSSLGACGGG
MSCDSASDRFTIEACKETEMLNYLIERFDSVGMEERKAPKMCSQPNVSQLLSNIRSQCIS
HVALVLQGALTQPRSPLQQSLLVPYMLCRNLPYGFIQELVRITHQEEEVFKQIFIPILHG
LALAVKECSFDSDNFKFPLMALAELCEIKFGKTHPVCNLATSLPLWCPKPLSPGCGREIQ
RLSYLGAFFSLSVFAEDDTKVGDKYFSGPAITMENTRVVSQSLQHYLESARGDLFKVLHN
ILLNGETRELALNYMAALVNYNVKKAQMQTDDKLVSTDGFMLNFLWVLQQLSMKIKLETV
DPYYIFHPRCRLVVTLEETRLKATMEELKSWMAELHEDPSKFSEPKFPTECFFLTLHTHH
LSILPSCRRYIRRLRAIRELNRTVEELKNSESQWKDSPLASRHREMLKRCKTQLKKLVRA
KACSDVGLLDENQLRRCLQFYSTVIQLILRMVDPAYPNITLPLNPEIPKSFAALPEFYVE
DVAEFLLFVVQYSPQVLYEPCVQDVVTFLVVFICSQHYIRNPYLIAKLVEVLFVTNPAVQ
PRTQRFSEMMENHPLSIKHLVPALMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQN
IAHHGTFMEEFNSGKQFVRYINMLINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPR
EQQQSRQSQLTQDERVSRSYLALATETVEMFHILTKQVQKPFLRPELGPRLAAMLNFNLQ
QLCGPKCRDLKVENPEKYGFEPKKLLDQLTDIYLQLDCARFAKAIADDQRSYSRELFEEV
ISKMRKAGIKSSIAIEKFKLLSEKVEEIVAKNSQSEMDYSDAPDEFKDPLMDTLMTDPVM
LPSGNIMDRSIILRHLLNSPTDPFNRQPLTESMLESVPELKERIHAWMREKQGARPF
NT seq
4134 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttgagcgcagacgagattcgcagaaggcggctggcacggctggcaggagga
cagacatcacaacccagcacccccctaagtactcctctcacgtccccacagagagagacc
ccacctggacccctccctggcccctcaggtgtctcaccccaacctgtaccaccagctgcc
tctcaatcattgggtctcaatgtccacagtggtactcctgccacatcccctatgggcacc
tctggggtggcatatggtagtcagagcagcgaaggtgtaagctccctctccagctccccc
tccaacagcctcgagacacagtctcagagtttgtctcgatcgcagagcatggacattgac
cctgcctcctgtgaaaagagcatgtcccaggtggacgtggactcagggattgagaacatg
gaggtggaggacagcgatcgcagggagaagagaaacttaactgaaaaggaaacgtctgca
aactctgatgtctctgaagatcaggctctgcacttgatttgtaaaatcctccgcgtatcg
tggaaggagcaggacagagatgtcatctttctcccttcactagctgcagattttcaccag
aaccctaaagatgtgtactctgacttcaaagacctcatcagccagatcctgatggaagtc
ttaatgatgtcatcccagtcaaatgtccacaacccgtttgccagcttgaccgccacctcc
cagcccattgcggcagcgaaatcctccgagcaccggctgacgctggtgcagccctctagc
caaggcggcagcccgatgggccccagtgctgggtctttcggagccagctctctgtccagt
ttgtatgggtgcgatagtcctcatccaatggcgctgaatgcagcagagaggacttgcccg
tctctctctaccccccctgcacctgctccaccctgtacgccacagtttgtagttcccccc
agcccacctgccaccgccgctattaggcaatccctcaatccgtcatctacccccatgccc
atctctcagagatatcgaccctactctgtcaccactccctgggtggcttctactcccatg
agcccagtttacagaggatatagtttccctggtctttctcccagcccagctgcgccctcc
gttcctccgaacaccccgcttccggcaacgcctttaagcccccagtcccttcttttgagc
tcgcccagctcaggcatccatcccccttccccgccccttcccgtggtgcctccttctccc
agaccgagttctcgacaggctgcctttgctgccaggatcccatcatctagccccttgtcg
ttcctgttttttgccctttctgacatgtctcaagacagcagtgatgaagagtctgaggag
gaggaggaggattttgcacaggttcagtttgggtccagtctgggtgcctgtggagggggg
atgtcatgcgattcagccagcgaccgtttcaccattgaagcatgcaaagagacagagatg
ctgaactacctcattgagcgttttgacagtgttggcatggaggagaggaaagctcccaag
atgtgcagccaaccaaatgtcagccagcttctcagtaacattcgctctcagtgtatctcc
catgttgcccttgtcctgcagggggcactgactcagcctcggagcccccttcaacagtct
cttctggtaccttacatgctgtgtcggaaccttccgtatggctttattcaggagctggtg
cgcatcacccaccaggaagaggaagtgttcaaacagatcttcattcccattctccatggg
ctcgctctggcagtgaaagaatgttccttcgacagcgacaactttaaattccccctcatg
gcattagctgagctttgtgaaattaagtttggaaagactcatcccgtgtgcaacttggca
acatcacttcctctgtggtgtcccaaacctctgagccctggttgtgggagagaaattcag
aggctgtcctaccttggggcgttctttagcctttcagtatttgcagaggatgataccaaa
gtaggggacaagtatttctctggcccagccatcaccatggagaacacccgagttgtcagc
cagtcgttgcagcactatctggagtcagcgaggggtgaccttttcaaagttctccataat
attctgctgaacggagaaacgcgcgagttagctctcaactacatggcagctctagtcaac
tacaatgtgaagaaagctcagatgcagactgatgacaagctggtgtcgacagatggcttc
atgctcaacttcttatgggtgctgcagcagctgagcatgaagataaaactggagacagtg
gacccatactacattttccatccacggtgtcgccttgttgtcaccctggaagagactcgt
cttaaagccaccatggaggagctaaaaagctggatggctgagctgcatgaggatccctca
aagttctcagagcccaagttccccactgagtgttttttcttgactcttcacactcatcac
ttgtccatcctgccaagctgtcggcgctacatccgcagattgcgggccatccgtgaactc
aacaggactgtagaggagctgaaaaacagtgagagccaatggaaggactctcccttggct
agtcggcacagagaaatgctgaaacgatgtaaaacccagctcaagaaactggtgcgagcc
aaagcgtgctctgacgtgggccttctggatgagaaccagctccgcagatgcctgcagttt
tacagcacagtcattcagctcatacttcgcatggtggacccggcctaccccaatattacc
cttcctttgaaccctgagattcccaaaagctttgctgctctgccggagttttatgttgaa
gacgtggcagagtttctgctttttgttgtgcagtactctccccaggttctgtatgagccg
tgtgtccaggatgttgtcaccttcttggtagtgttcatctgcagtcagcactacatccgg
aacccctaccttatagccaagttggtggaagtgctgtttgtcaccaaccctgctgtacag
cctcgcactcagagattctctgaaatgatggagaaccacccgttgtccatcaaacacctg
gtccctgctctcatgaagttttacactgacgttgagcacactggtgctaccagcgagttc
tacgataagtttactatacggtaccatatcagtaccatcttcaagagtctctggcagaac
attgcccaccatggcaccttcatggaggagttcaactctggcaaacagtttgtgcgctac
atcaacatgctgataaacgacaccaccttcttattagacgagagcctcgagtccctgaag
cgcatccatgaagttcaggaagagatgaagaataaggagcagtgggatcagctgcccaga
gagcagcagcagagccgccagtcccagctgactcaggacgagcgagtgtctcgctcttat
ctggcgctggctacagaaacggttgaaatgttccacatcctaaccaagcaggttcagaag
cctttcctcaggcctgagctcggacctcgtttagctgctatgctgaactttaaccttcag
cagctctgtgggcccaagtgccgggacctgaaggtggagaacccagagaaatatggcttt
gagcccaaaaagctcttagaccagctgacagacatctaccttcaactggattgcgcccgc
tttgctaaagcgattgcagatgaccagcgatcatacagccgggagctttttgaggaggtc
atttccaagatgagaaaggctggtattaagtcctctattgccattgagaaattcaagctg
ctatctgagaaggttgaagaaatagtcgccaagaactcccagtcagagatggactacagc
gacgcacctgatgagttcaaagaccctctaatggacactctgatgactgacccggtgatg
ctgccctctgggaacattatggacagatccatcatcttgcgccacctgctgaactccccc
actgatcccttcaacaggcagcccctcacagagagcatgctggagtcagtgcctgagctg
aaggagagaatccacgcctggatgagggagaaacagggcgctcggcctttctaa
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