Gambusia affinis (western mosquitofish): 122834465
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Entry
122834465 CDS
T07758
Symbol
fancd2
Name
(RefSeq) Fanconi anemia group D2 protein isoform X1
KO
K10891
fanconi anemia group D2 protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122834465 (fancd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122834465 (fancd2)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FANCD2-I complex
122834465 (fancd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FancD2
CCDC53
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
122834465
NCBI-ProteinID:
XP_043978865
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All DBs
Position
LG07:complement(11425533..11439742)
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AA seq
1453 aa
AA seq
DB search
MMRKKRHSSVEKVAGTTAATKAKKSRNSSRQPKEAAPEEASETAFATFVKKAGVSLKHNG
ASHEIAVDQVVFQKRIQQQLQKSPRYPDILKEFITDLEAYIENPDRFRNCLLPCIPQPSE
ADVRSVSSFQESLIRMLLGIEMLQTLIISTLLEKLPEFMFDGAVDGGLNIPRMIINQLKW
LDRVVDTKELAVKLMELVSVAPVEVQRDIITSLPEILEDSQHNDIARELNALLQENTQLT
VPILDALSSLNLSSSLLTEVREAVMATLAAVQLEDLPVVVKFILHSVSASNAYEVVSNLR
QKLELEQCVLPPALQASQIRMKSKSSAGSASTAASGNSQDSVTLVLDCIKSAVRFQKTIS
EAWLKAIESVDDVEDHKVLDLLVLFILHCTNANQSRRGAERVLKLKVRTGLMQEALLQKT
FRDYSQVMRGYFPSILALAQSLVRSPDPCVVPFGGQMYRHSFTAFDSYCQQEVVGSLVTH
VCSGVSGEVDVALELLCSLVMERPSEMALYAVFVKGILDYLDNLTPQQIRRLFHLLSRLA
FGQQEQGSQIQSIRLFLQDDMHIVIRKQLSSTVPKYKRIGIIGAVMIVGSMGALRPKGKE
SQSSSLSQETLRQVTALLELVKSSSESSPEAAALYYDELANLIWSSALDPQVEEMIGMSV
LDDFQDDFVVDLGPDIAGSFIFPACAMYNLEEDESQGGIAINLLPLLAKETQNKGEQQSQ
IGKQKQQKLVSPLCLSPFFRLLRLCEEKRHQGDLEEIDALVGCPLILTNMDVVDKVDSLS
KAEREFLCTLLFHTINWFREVVNAFCKQKETEMKMKVMTRLQNITFLQMLLERVLAGTPG
YMPPVSNFDGETTDGISFSVPVNKAKKDRTGKKRKAPGKNAPEGVSQPEEATEADETQQE
QPEKEKEKENRLGVSLTAYRPFFRELDMEVLSVLQCGLLSRSLLDSELHTKVQEEVVLGP
TELVFLLEDMQHKLEFSLTAAPAKRAPFLKMRADKTVGFSHLQQRSAKDIASYCVQLLPA
LCSHLENCHNHFQTLLSENNGIVDGPSTDVEEHQVMSSGYQLLLQVINTTFSWSGFSQPG
QRSLLKKALGLLAGRLKEGGPELTLEQLVKHSFEYLLNFRSTMPSLSTALCLSQLLSTVS
EKGGNPGAYREQTASLARRFLNQSWVTASGEKERGGKFNEALHTLLSIYLEHVDDVLKAV
EEIAGEGITELINTSKDESSASWPTLNRQTFLVFYKVLMGELEKAARKIPAGKMSDSSEA
QSEKLLTWNLAVRDFHILVNLVKVFDSRPVLNVSLKYGRLFLESFLKLGMPLLDYSFKRH
KEDVQSLLKTFQLSTRQLHHMCGHSKIHQDTSLTNHVPAVKKSLELFVYRVKAMLTLNNC
QEAFWMGNLKNRNLKGEEILSQRSQGSDDDDEEEEGNQELPPPQEQSDDEDQEADSGENS
RISRREDSTEDSD
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgcaaaaagcgacactcctctgtggaaaaagtagcgggaacaactgccgccaca
aaggcaaagaagagtcgcaacagtagtcggcagcctaaagaggctgccccagaggaagca
agtgaaactgcttttgccacttttgtaaaaaaagccggtgtcagcttgaaacataatggc
gcatcgcatgagatcgctgttgatcaggtggttttccagaagcgaatacagcagcagctg
cagaaaagccccagataccctgacatcctgaaggagtttataacggatttggaggcttac
attgagaacccggacaggttcaggaactgccttcttccatgtatcccacaaccatctgaa
gcagacgtgagatctgtcagctcattccaggaaagcctcatcagaatgttattggggatc
gaaatgctgcagactttgataataagcaccttgcttgagaaactccctgaatttatgttc
gatggcgctgtggatggaggactcaatattcctcgtatgattattaaccagctgaaatgg
ctggacagggtcgtggacacaaaggaacttgctgtgaagctgatggagttggtctcagta
gcaccagttgaggtgcagcgtgacatcatcaccagcttaccagagatactggaagactct
cagcacaatgacatagccagggagctcaatgctttgcttcaggagaacactcagttaacg
gttcccatcctggatgccctctccagcctaaacctctcgtcatcattactgacggaggtc
cgagaggcggttatggccaccctcgccgctgtccagctggaagacctacccgtcgtggtg
aagttcatcctgcattctgtctcagcttcgaacgcatacgaagtggtgagtaatctgcgt
caaaagctggaactggagcagtgcgttcttcctccggcgctgcaggcctcacagatccgc
atgaaaagcaaatcatcagcaggatctgcttctacagctgcttctggcaacagtcaggac
agtgttacgttggtactggactgcatcaagtcagcagtccggttccagaaaactatttct
gaggcttggctcaaggcgatcgagtctgtggatgatgttgaggaccacaaggttttagat
ctgctggtgctcttcatcctgcactgcaccaacgccaaccagagccgccggggtgccgag
agagttctgaagctcaaagtgaggactggactcatgcaggaggctctgctgcagaaaacc
ttcagggactactctcaggtcatgcgagggtacttcccctccatcctggctcttgctcag
agtttggtgcgctcccctgatccctgcgtggtgccttttggtgggcaaatgtaccgccac
tccttcactgcatttgactcttactgccagcaggaggttgttggctctcttgtgacccat
gtgtgcagcggtgtcagtggggaggtggacgtggccctggagctgctctgcagtcttgta
atggaaagaccctcagaaatggccctctatgctgtttttgtgaaggggatcttggactac
ctggacaatctcacaccacagcagatcagaagactcttccaccttctgagcagactggca
tttgggcagcaggagcaaggatctcaaatccagtccattcgtctcttcctgcaggacgac
atgcacatagtgatccgtaagcagctctccagcaccgtgccaaagtacaagcgtataggc
atcattggcgctgtgatgattgtcggcagcatgggagccttgaggcctaaaggaaaggaa
tcacagagcagctctctttcccaggaaacattaagacaggtgacggctctgctggagctg
gtgaagtcgagcagtgaaagctctcctgaagcagcggctctgtactacgatgaactggcc
aacctgatctggagttctgcactggacccacaggtggaggaaatgattggaatgagtgtc
ctggatgacttccaggatgactttgtagtggaccttggaccagatatagcaggatctttt
atctttccggcctgtgccatgtacaaccttgaggaggatgagagccagggaggtatcgcc
atcaacctgttgcctctgctggccaaagaaacccaaaataaaggagagcagcaatctcaa
attgggaaacagaagcaacaaaagctggtgtcccctctctgtttatctccctttttccgc
ctattgaggctttgtgaagagaaacggcatcagggagatctagaagagatcgatgccctc
gtgggatgtcctctgatcctgacaaacatggatgtagtggacaaagtggacagcctctcc
aaagctgagagggagttcctctgtactttgctctttcacacgatcaactggttcagagag
gtcgtgaatgcattctgcaaacagaaagaaacggagatgaagatgaaggtgatgactcgc
ctgcagaacatcacttttctgcagatgctgttggagagggttctcgcaggaactcctggt
tacatgccacctgtttcaaactttgatggagaaactacagatgggataagtttcagtgtt
cctgtgaacaaggcaaagaaagatcgaacggggaaaaagagaaaggctcctggtaagaat
gccccagaaggcgtctctcagcctgaggaggcgactgaagcagatgaaactcagcaggag
caaccggaaaaggagaaggaaaaagagaaccggctcggtgtcagtttgacagcttacagg
ccgtttttcagagagctggacatggaggtgctcagtgttctgcagtgtggtttgttgtca
cgctcgctgctggactcagagctccacactaaggttcaagaggaggtcgtgttgggcccc
accgagctggtcttcctgctggaggatatgcagcacaaactggagttcagtctcactgcc
gctccagcgaagagagctccgttcctcaagatgagggcagataaaactgtgggattctca
catctgcaacagaggagtgcaaaagacattgcctcatactgtgtccagctgttgcccgcc
ctctgttcacatctggaaaactgtcataatcactttcagactctgctgtctgagaacaac
ggcatcgtggacggaccttcaacagatgtggaggagcaccaggtaatgtcatcgggttac
cagctgctcctgcaggtcataaacactaccttcagttggtctggattcagccagccggga
cagcggagcttgttgaagaaagctttgggacttttagctggacggcttaaagaaggaggt
cctgaactgaccctggaacagctcgtcaagcacagttttgagtacctgctgaacttccgc
agcacgatgccgagcctgagcacagctctctgtctctcccagcttctgtcaactgtttca
gagaagggaggaaaccctggtgcttatagggagcagactgcttccctggcgcgccgtttc
ctgaaccaaagttgggtgacagctagcggagagaaagagcgaggcggaaaattcaatgag
gcacttcacacactccttagcatctaccttgagcatgtcgacgacgttttgaaggcagtg
gaggaaatagccggagaaggaatcaccgagctgatcaacacatccaaagatgaaagctct
gcttcctggcccactctgaacagacaaacgttcttggtcttctacaaagttttgatgggc
gagctggagaaagctgccaggaagattcctgctggtaaaatgagcgacagctctgaggct
caaagtgagaagctgctgacatggaacctggcagtcagagactttcacatcctagtcaac
ctggtgaaggtgtttgattccaggccagtacttaatgtgtccttaaagtatggacgactt
tttctggagtcttttctgaagttgggaatgccgctgctagactacagcttcaagaggcac
aaggaggatgtccagagtttgctgaagaccttccagcttagcactcgacagctccaccac
atgtgtggacactccaagattcaccaggacaccagcctaactaaccatgtgccagctgtg
aagaagagcctggagctgtttgtgtacagagtgaaggccatgctgacgctcaacaactgc
caggaggccttctggatgggaaacctgaagaataggaacctgaagggtgaagagattctt
tctcagagatcacaagggagtgatgacgacgatgaagaggaggaggggaatcaggaatta
ccgccaccacaggaacagtcagatgacgaggaccaggaagccgattctggggaaaacagt
aggatcagcagaagggaggacagtacagaagattctgattaa
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integrated database retrieval system
