Gambusia affinis (western mosquitofish): 122834484
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Entry
122834484 CDS
T07758
Name
(RefSeq) uncharacterized protein LOC122834484 isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122834484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122834484
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122834484
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122834484
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_UBOX
zf-RING_2
zf-C3HC4
KH_DTX3L
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
Baculo_IE-1
zf-RING_4
zf-RING_10
Motif
Other DBs
NCBI-GeneID:
122834484
NCBI-ProteinID:
XP_043978904
LinkDB
All DBs
Position
LG07:12938671..12946513
Genome browser
AA seq
789 aa
AA seq
DB search
MSTSMEEEEPMDFVAQGEMGLPQAQNKVLLTLTLRWSVEKKKKVDLQKALQTWLSRTKAD
CSVQEILPDGRAVILIELPPGLTEIYSLNGETLYTKDKKEVVTILSVMVGTPQQDPQTAD
DALVNPTPPAASVNTKTADLKPSALHTLTQAAKETPKEEVLLTLSLKWLDKNKKKTDLQI
VLQVWFSKCEPKIDCTVHKLLPDDRAVIVVSPLPGLEELQKLGGKTLCTKDKNELVTILS
VMVGTPKQDPQTADDASVNPTPPAASVNTNDADLKPSALHTLKQDMLGNPFTSTAETLPP
RKPEEEAQESCLQPLSHFWYMSHIYKEGIKQIERKNKIKMVAQVHVTFEAEEEDGNPHEA
LNEFIDLSQSCSTDSGQAVIPLKFVDPDQWSDALKVIKRNKDKILLTMSSEEVIVSGPKQ
SQDEFSAVLNAMQTTNTPAEQHKPTPDDSSLRRTNMTDKYPGLLMRNVSGDLSMKVNMTI
KDDLADEGLTINKNQWKNLKSSHNDQLTVIKSKFNVDFKESSISEGKVNVKPSYKGHGGN
AAMESHAVRAQGLYQKMMTSPMSLPPPNRTTWFSGSEEAFNKTRNKSHSIQNRKKSASKI
TTGDKKDDKCPLCLSDFTNKKQLKCKHAFCKECLQNALKACGPICPICKDVFGVMKGNQP
DGKMSWNKYPLSLPGFKDCGHICITYNIPSGKQTENHPNPGQFYRGTTRYAYLPDNKEGN
KVLLLLNKAFDQKLIFTVGASRTTGAENMVTWNDIHHKTSMSGGPECYGYPDENYLSRVK
EELKAKGIQ
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgtctacttccatggaagaagaagagcccatggactttgtggctcagggtgagatgggt
cttccacaggctcaaaataaagttctgctgactctcacgttgaggtggtctgtggaaaag
aaaaagaaggtagatttacaaaaagcactccagacttggttgagcagaactaaagcggac
tgctctgttcaagagatcttaccagatgggagggctgtgattctgattgaacttcctcca
ggtctcacagagatttattcgctgaatggtgaaacactttatacaaaagacaaaaaagaa
gtcgtcaccatcttgtctgtaatggtgggaacaccacagcaggatccacaaacagcagac
gatgctttggtgaatccgactcctccagctgcttctgtaaacactaaaactgctgatttg
aagccatcagctctacacactctaacacaggctgcaaaggagactccaaaagaagaagtc
ctactgactctgtcgttgaagtggttggataaaaataaaaagaagacagatctacaaata
gtccttcaggtttggttcagcaaatgtgaacctaaaatagactgcacagttcacaagctt
ttaccagatgatcgggctgtgattgtggtttcacctcttccaggccttgaagagcttcag
aagctgggtggtaaaacactttgtacaaaagacaaaaacgaattagtcaccatcttgtct
gtaatggtgggaacaccaaagcaggatccacaaacagcagacgatgcttcggtgaatccg
actcctccagctgcttctgtaaacaccaatgatgctgatttgaagccatcagctctacac
actctaaaacaggatatgcttggtaatccgtttacctcgacagcagaaacccttcctcca
agaaaacctgaagaagaagctcaagaaagttgccttcagccgctgagtcacttctggtac
atgagtcacatctacaaggaaggaattaaacagattgagaggaagaataaaattaagatg
gtggcacaggtccatgtgacatttgaagctgaagaggaagatggaaaccctcatgaagct
ctcaatgagttcattgatctctcacagagctgctctactgattcaggccaggcagtgatt
cctctcaagtttgtagatccagatcagtggagtgatgcattaaaagtcatcaagagaaac
aaggacaagattttgctcaccatgtcatctgaagaagttattgttagtggtccaaagcaa
agccaagatgaattcagtgcagtcctgaatgcgatgcagacgacaaacacaccagctgaa
cagcacaaacctacaccagacgattcatcactgaggaggacaaacatgaccgacaaatat
ccagggctactaatgcgcaacgtcagtggtgatctctcaatgaaagtcaacatgacaatc
aaagatgatcttgctgatgaaggtctgaccataaataagaaccagtggaaaaacctgaag
tcttctcataatgaccaacttacagtgatcaaatctaagttcaatgtggattttaaagaa
tccagcatcagtgaggggaaagttaatgtcaaaccatcatataaaggacatggtggaaac
gcagcaatggagagccatgctgtcagagctcagggtctgtaccagaagatgatgacgtca
cccatgtcacttcctccacctaatcgtaccacttggttcagtggttctgaagaggcgttc
aataaaactagaaataaaagtcattcaatacaaaacagaaaaaaatcagcaagcaagatc
acaacaggggacaagaaagatgataaatgcccactatgtttgtctgattttactaataag
aagcagctgaagtgtaagcatgcattttgtaaggagtgcctgcaaaatgcactgaaagca
tgtggacccatctgtccaatatgcaaggatgtttttggtgtgatgaagggaaaccaacct
gatggaaaaatgtcttggaataagtatccattatccctacctggattcaaagattgtggc
catatatgcatcacctacaacattccaagtggaaaacagacggagaatcacccaaatcct
ggccagttctatagaggaactaccagatatgcatatcttccagacaacaaagagggcaac
aaagttctgctactcctgaataaagcttttgaccagaagctgattttcactgttggagct
tctaggacaaccggggcggaaaacatggtgacctggaatgacatccaccacaagacgtcc
atgtcaggaggaccagagtgttatggatatccagatgagaactacctgagcagagtcaaa
gaggagctgaaggctaagggcatccagtga
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