Gambusia affinis (western mosquitofish): 122834485
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Entry
122834485 CDS
T07758
Name
(RefSeq) uncharacterized protein LOC122834485
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
122834485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122834485
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122834485
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122834485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
zf-RING_2
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-RING_5
KH_DTX3L
Zwint
Baculo_IE-1
zf-RING_4
TRAF3_RING
zf-RING_10
Prok-RING_4
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
122834485
NCBI-ProteinID:
XP_043978906
LinkDB
All DBs
Position
LG07:12954604..12959560
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AA seq
644 aa
AA seq
DB search
MASNQREEEEMDFVNQDHSKELSQAAKEEVLLTLSLKWLDKNKKKTDLQKVLQTWFSKCE
PKIDCTVRKPLPDDRAVIVVSPPPGLQELQKLSGETLYTKDKKSEKKLEKELVTILSVMV
GTPKLDPQTADDASVNLTPPAASVNTNNAESEPPAGKATVEEQKKSISTAGDTPAENQTM
DENCLLSVTQFLYVSHIFKDKLQRIQEENEVEIKSEVIVKFESKSKDGKPNEAKTKFIDL
VQESLANFGGSVFSPSSADPDQLNRALKVIMNKENKLLANMSSEEITVFGPNGQRTVLDL
MLKPSHKTFTEESERRSLSSNFSGDVLVKINMTIKDDLADEGLAIDKNQWKNLKSTYDNH
LRVIKSKFNVDFKESSISEDKVNVKPSYKGHGGNAAMESHAVRALLRLYQKMMTSPMSLP
PPYRATWFSGSEDNFTGPGVNGHSKQNNKESAGGGATGDSKDDKCSICLSDFTNKKQLKC
KHAFCEECFQNALKACGPICPICKDVFGVMKGNQPDGKMTWNTYPSSLPGFTDCGYICIT
YDIPSGKQTENHPNPGQFYGGTIRHAYLPDNKEGNEVLLLLKKAFDQKLIFTVGASRTTG
AENMVTWNDIHHKTSISGGPQLYGYPDENYLSRVKEELKAKGIQ
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtaaccaaagagaagaggaagaaatggattttgtaaaccaggatcactcgaag
gaattatctcaggctgcaaaagaagaagtcctactgactctgtcgttgaagtggttggat
aaaaataaaaagaagacagatcttcaaaaagtccttcagacttggttcagcaaatgtgaa
cctaaaatagactgcacagttcgcaagcctttaccagatgatcgcgctgtgattgtggtt
tcacctcctccaggcctgcaggagcttcagaaactgagtggcgaaacactttatacaaaa
gacaaaaaatcagaaaagaaattagaaaaagaattagtcaccattctgtctgtaatggtg
ggaacaccaaagctggatccacaaacagcagacgatgcttcagtgaatctgactcctcca
gctgcttctgtaaacaccaataatgctgaatctgagccgccagctggcaaagcaaccgtt
gaagaacagaagaaatcaatttctacagcaggagacactcctgctgagaatcagacaatg
gatgaaaattgtcttctgtcagtgactcaattcttgtatgtgagccacatcttcaaggac
aaactacagcgcatacaggaagagaatgaagttgaaataaaatcagaagttattgtgaaa
tttgaatccaagagtaaagatggaaaaccaaatgaagcaaagacaaagttcatagatctt
gtccaggaatccttggctaattttggtggttcagttttttctcctagctctgcagatcca
gatcagttgaacagagcattgaaagtcatcatgaacaaggaaaacaaacttttagccaac
atgtcctctgaagaaataacagtttttggaccaaatggccagcgaacggttcttgatttg
atgttaaaaccatcacataaaaccttcactgaagagtctgaacgtcggtctttgtcttca
aacttcagtggtgatgtcctggtgaaaatcaacatgacaatcaaagatgatcttgctgat
gaaggtctggccatagataagaaccagtggaaaaacctgaagtctacttatgataaccat
cttagagtgatcaaatctaagttcaatgtggattttaaagaatccagcatcagtgaagac
aaagttaatgtcaaaccatcatataaaggacatggtggaaacgcagcaatggagagccat
gctgtcagagctctgctgcgtctgtaccagaagatgatgacgtcacccatgtcacttcct
ccaccttatcgtgccacttggttcagtggttctgaagataatttcactggtcctggagtt
aatggtcattcaaaacaaaacaataaagaatcagcaggagggggcgcaacaggggacagc
aaagatgacaaatgttcaatttgtttgtccgattttactaataagaagcagctgaagtgt
aagcatgcattttgtgaggagtgctttcaaaatgcactgaaagcatgtggacccatctgt
ccaatatgcaaggatgtttttggtgtgatgaagggaaaccaacctgatggaaaaatgact
tggaatacgtatccatcatccctacctggattcacagattgtggctatatatgcatcacc
tacgacattccaagtggaaaacagacggagaatcacccaaatcctggccagttctatgga
ggaactatcagacatgcatatcttccagacaacaaagagggcaacgaagttctgctactc
ctgaaaaaagcttttgaccagaagctgattttcactgttggagcttctaggacaaccggg
gcggaaaacatggtgacctggaatgacatccaccacaagacgtccatatctggaggacca
caactttatggatatccagatgagaactacctgagcagagtcaaagaggagctgaaggct
aagggcatccagtga
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integrated database retrieval system
