Gambusia affinis (western mosquitofish): 122834633
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Entry
122834633 CDS
T07758
Name
(RefSeq) protein polybromo-1-like isoform X1
KO
K11757
protein polybromo-1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
122834633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122834633
03036 Chromosome and associated proteins [BR:
gaf03036
]
122834633
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
122834633
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
122834633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
DUF5517
Motif
Other DBs
NCBI-GeneID:
122834633
NCBI-ProteinID:
XP_043979160
LinkDB
All DBs
Position
LG07:11012057..11028289
Genome browser
AA seq
1658 aa
AA seq
DB search
MALKRRRATSPSSSVSGGDFDHSQTSLVSSIGRKRRRTSNIPTVDPIAVCHELYNTIRDY
KDDHGRMLCELFIRAPKRRNQPDYYHVVSQPIDMMKIQQKLKMEEYDDVDQLTSDFQLLF
NNAKTYYKTDSPEYKAACKLWDLYLRTKNEFIQRGEYEDDDEDGYNAQENPGGSTEDESA
SACLKEVLEQLLDAVVSYTEPSGRLVSELFQKLPSKMQYPDYYAVIKEPIDLKLIAQKIQ
LGNYRCVSAMAKDVDLLVKNAKTYNEPGSQVFKDANTIKKVFAQKKSEMEHGEPIKSSIR
IRNKRSVQGDRLSAITMALQYESDEEGILSGTVHYDEGESEAESMTSNIDMSNPIFQLYE
AVRGARNSQGQLISEPFLQLPSRKDYPDYYQQINQPVCLHHIKNKMKNNEYESVEHIDSD
LMLMFENAKRYNVPHSSIYKRALKLQHIQQMKRKELLQRTDDDGDSMLSSATSDTSSTKR
KRFTLVLKHSTLHPFFVELTCLLSFLVSSHKKNTKKNRMKALLASVTEARESGTGRRLCD
LFMVKPSKKDYPDYYKVILDPMDLRTIDYNIRSEKYMTEDAMVEDMKLMFRNARHYNEEG
SQVYNDAAILEKIMEDRRRDLGPATDDDDIMSPKLKIRKSSLSLKKSKYLTPLQQKLNEL
YEAVKNYTDKRGRRLSTIFLRLPSRAELPDYYIAIKKPVDMEKIKSHMLANKYQDVDALV
EDLVLMFNNACTYNEPESLIYRDALLLHKVLLETRRELEGGEDNHVPDVPRLIQELIRSL
FVSVLGHQDDEGRCYSDSLAEIPAADPTNPEKPALNFDIVRKNVERGRYKRLDVFQDHMF
EVLEKARRLNRTDSEIFEDAVELQQFLVRIRDELCKNGEILMSPALSYTSKHLHSDVEKE
KKEKLPKEIEEDKIKREEEKREAEKRDGTVGGSWQVQRTYSQDCSFKDSMYHVGDYVYVE
PAEPNLQPHIIYIERLWEDDTGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKAP
ISKILGKCVVMFVKEYFKLSPEGFRQEDVYVCESRYSAKSKSFKKIKMWAMPLSSVRFVP
RDVPLPVVRVASMFVTKQDDKPAEIVEESKMTAGIIDKEREDVPLDVTNGEPGCQYYEQL
CYNNLWLKVGDCVYIASHGLVRHRVGRIEKMWMRDEAGYFFGPIFIHPEETEHEPTKMFY
KKEMFLSNLEETCPMTCIIGKCVVASFKEYLSCRPTEVPEENVLLCESRYIESEKQMKKF
KGLKRFSLSGKVVEDEIYYFRKLIVPQKEPSPLLDRKIEELEAKFADMTDEELEDLGDDD
GDLGDHSLPQMQSSMNSDMDMMSYTPPQSTPKSMKGLAKKEASKRKINMSGYILFSSEMR
AVIKAQHPDFSFGDLSRLVGTEWRNLDSSRKAEYEERAAKVAEQQERERGHHQTSPRAGT
PVGALMGVVPAPTPMGMLNPSMTPVSGVMGVYRTAMMDHVEGMVSLAGIPPHHMGMPVFP
QHLLPVMPGFRGMPSFGVNGLGIGSAAGNMHGSQVGLGSGQQAPPPYPGQSHLGQPALHQ
PSTPVFVSPPAKSQRLLHSEAYLRYIEGLNAESSTVSKWDHALTVKKQDVRMTKEQESRL
PSHWLKSKGAHKTMADALWRLRDLMMRDTLNIRQMHNQ
NT seq
4977 nt
NT seq
+upstream
nt +downstream
nt
atggccttgaaaaggagacgggcgacgtccccttctagcagtgtgagtggaggagatttt
gaccatagccagacttcgttagtgtcttcaattgggagaaagaggagaaggacctcaaac
attccgactgtggatcctattgctgtatgccacgagctgtacaacacaatcagagattac
aaggatgaccacggccggatgctgtgtgagctgttcatcagagcacccaaacgaaggaat
cagccagactattaccatgtggtgtctcagcccattgacatgatgaagatccagcagaaa
ttaaagatggaggagtacgatgatgtcgatcagctaaccagtgacttccagcttctgttc
aacaatgcaaagacttattataagactgatagtcctgagtacaaagcagcctgcaagctg
tgggacctctacctccggacgaagaatgagtttattcaaaggggtgaatatgaagatgat
gatgaagatggatacaatgcacaagaaaaccccggaggttccactgaagatgagagtgca
tcagcttgtttgaaagaagttctggagcagctccttgacgctgttgtgtcctatactgag
ccaagtggtcgcctggtcagtgagctcttccagaagcttccatccaaaatgcaatatcca
gactactatgctgtaattaaagaaccaatagatctgaaactcatcgctcagaaaatccag
ctgggcaattatcgatgtgtcagcgccatggctaaagatgtggacctgctggtgaagaac
gccaaaacctacaatgagcctggttcacaggtttttaaggatgctaacactattaaaaag
gtttttgcacaaaagaagtccgagatggaacatggagagccaatcaagtccagtattcgc
atcagaaataaaaggtctgtccagggagaccggctctcagctatcactatggctcttcag
tatgaaagtgatgaggagggtatcctttctgggaccgtccactatgatgagggtgaatct
gaagcagagagtatgacttcgaacattgacatgagcaaccccatcttccagctttatgaa
gctgttcggggagccaggaacagtcagggccagctgatttctgagcccttcctacagctg
ccctctaggaaagactaccccgattattaccagcagatcaatcagccggtctgcctgcat
cacatcaagaacaagatgaagaacaatgaatacgagagtgttgagcatattgactctgat
ctaatgctgatgtttgagaatgccaaacgctacaacgttccccactcctccatctacaaa
cgtgcgctcaagcttcagcacatccagcagatgaagagaaaggagcttttgcaaagaaca
gatgatgatggcgacagcatgctctcctcggccacgtccgacaccagcagcacaaaaaga
aaaaggttcactttggttctaaaacattcaaccctgcacccattttttgtggaactaacc
tgtctgttgtcttttttggtttccagccacaagaaaaacacaaagaaaaatcgaatgaaa
gctctactagcctctgttactgaagccagagagtccgggactggccggagactctgtgac
ctcttcatggtgaagccatctaagaaggactaccctgattactacaaagttatcctggat
ccaatggacctcaggaccatagactacaacatccgctcagaaaagtacatgactgaggat
gcaatggtggaggatatgaagctgatgttccgcaatgccaggcattataatgaagaaggc
tcccaggtctacaatgacgcagccattcttgagaagatcatggaagacagacgcagagat
cttgggccagcaacggatgatgatgatattatgtctccaaagttaaaaataagaaagagc
agcctctctctgaaaaagtccaagtacctgacccccttgcagcagaaactaaatgagctt
tatgaagccgtaaagaactacacggataagcgaggccgtcgcctcagcacgatcttcctg
cggcttccatctcgtgctgagctgcccgattactacatcgccatcaagaagcctgtagac
atggagaagatcaagagccacatgctggctaacaagtaccaggacgtggacgcgctggtc
gaagacctggtgctcatgttcaacaatgcgtgcacctacaacgagcctgagtctttaatt
taccgcgacgctctgctgctgcacaaggtgctattggagacgaggcgggaactggaaggt
ggagaggacaatcacgttcccgatgtgccccgactcatccaggaactcatccggagtctc
ttcgtctctgtgctcggtcaccaagacgatgaaggacgttgttacagtgattctcttgca
gagattcctgctgcagatcccaccaacccagagaagccagcgctcaatttcgatattgtc
aggaaaaatgtggaaaggggccgctacaagaggttggatgtatttcaggaccacatgttt
gaagttctggaaaaggccagacgattgaataggactgactcagagatctttgaggatgca
gtggaactgcagcagtttttggttcgtatcagagatgagctgtgtaaaaatggagagatc
ctgatgtcccctgccctcagctacacttcgaagcatttgcacagcgatgtggaaaaggaa
aagaaggaaaagcttcccaaagagattgaggaggacaaaattaagagagaagaggagaaa
agagaggcagagaaaagagacggcactgttggaggctcctggcaggttcagcgtacgtac
agtcaggactgcagcttcaaggacagcatgtaccatgtgggagattatgtttatgtggag
cctgcagagcctaacctccagccacatatcatttacattgaacgcctttgggaagatgat
acgggggagaagtggctgtacggctgctggttctacaggccaaatgaaacatttcatcta
gcaacaagaaaattcttggagaaagaagttttcaagagcgattattataacaaagctcct
atcagcaaaattctggggaaatgtgtggtcatgtttgtgaaggagtacttcaagctttcc
ccagaaggattcaggcaggaggatgtctacgtctgcgagtctcgctactctgccaagtca
aagtcctttaaaaagatcaagatgtgggccatgccgctcagctcggttcgatttgttccc
agagacgtccccctgccggtggtccgagtcgcttctatgtttgtcactaaacaagatgac
aagccagcagagattgtagaagaaagcaaaatgactgctggtattatagacaaagagagg
gaggatgttccactggatgtgaccaacggagaaccaggctgtcagtactatgagcaactc
tgttacaacaacctgtggctgaaagtgggagactgtgtttacattgcttctcatggactg
gtgcgccaccgagtgggcagaattgagaaaatgtggatgcgagatgaagcaggctacttc
tttggtcccatctttatccatcctgaagagacggagcacgaaccgactaagatgttctac
aagaaggaaatgttcttaagcaacttggaggagacctgtcctatgacctgcatcatagga
aagtgcgttgtggcatcgttcaaagaatacttgtcttgtcggcccactgaagtgcctgaa
gaaaatgttcttctctgtgagagtcgctacatcgagagtgaaaagcaaatgaagaagttc
aagggtcttaagcgtttttccctctctgggaaggtggtagaagatgaaatctactatttc
aggaagctgatagttccccagaaagaaccatctcctctgctggacaggaaaattgaggaa
cttgaagctaagtttgctgatatgaccgatgaagagctggaagatcttggggatgatgat
ggggacctgggggatcattcccttcctcagatgcaatcctctatgaatagtgacatggac
atgatgtcatacacccctccacagtcgactcctaaatctatgaaggggcttgcaaagaaa
gaagcttcgaagcggaaaatcaacatgagtggctacatcctgttcagtagcgagatgcga
gcggtcatcaaagctcagcacccggacttctcttttggggatttgagtcgtcttgttggc
acagagtggaggaacctggacagttccaggaaagcagagtatgaagagcgagcagctaaa
gttgctgaacaacaggagcgcgagaggggtcatcatcagacgtccccaagagcaggtacc
ccagtaggggcactgatgggggtagtgcctgccccaacccccatggggatgctaaatccc
agcatgacgcctgtgtcaggtgtgatgggtgtatataggacagctatgatggaccatgtt
gaaggcatggtcagtttggctggtataccaccacatcacatggggatgcctgtctttccc
caacatctcctgcccgttatgcctgggttccgtggaatgccgtcctttggtgttaacggc
ctgggaattggatcagcagcaggaaacatgcatggatcacaggtgggtttgggctcagga
cagcaggctcctcctccatacccaggacaaagccatctgggccagccagctctccaccag
ccctccactccagtgtttgtgtctccccctgccaaatctcagcggctgctgcactcagag
gcctacctcagatacattgagggcctcaatgcagaatcttccactgtcagcaaatgggac
catgcactcacagtaaaaaaacaagatgtgcgcatgacaaaagagcaagaaagcagacta
ccttcccactggttgaagagcaagggggcccataagaccatggcagatgcactttggcgg
cttcgtgacctgatgatgcgcgacacccttaacattcgtcagatgcacaaccagtag
DBGET
integrated database retrieval system
