Gambusia affinis (western mosquitofish): 122834943
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Entry
122834943 CDS
T07758
Symbol
arntl1a
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like 1a
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122834943 (arntl1a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
122834943 (arntl1a)
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
bHLH_HIF1A
bHLH_SAC51
Motif
Other DBs
NCBI-GeneID:
122834943
NCBI-ProteinID:
XP_043979454
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All DBs
Position
LG08:18162243..18188560
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AA seq
638 aa
AA seq
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MEGDDFNTEAVMNICDDLMADQRMDISSTMTDFMSPSSTDLISSSISTPGMDYNRKRKGS
STDYQIDGFSFDDMDSDKDKLGSDHQGRIKNAREAHSQIEKRRRDKMNSFIDELASLVPT
CNAMSRKLDKLTVLRMAVQHMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFV
VGCDRGKILFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLID
AKTGLPVKTDITPGPSRLCSGARRSFFCRMKCNRPSVKVEEKDFPSTCSKKKADRKSFCT
IHSTGYLKSWPPTKMGLDEDNEPDNEGCNLSCLVAIGRLHPHIVPQPSPADIRVKPTEYV
SRHAIDGKFVFVDQRATAILAYLPQELLGTSFYEYFHQDDISHLAECHRQVLQMREKINT
NCYKFKIKDGSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSCPIMEGSDYPQSAASPQSM
DSVLTSEGGGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNI
TSTPPPDTCSPGGKKIQNGGTPELPSTGLIPGPDSVGYPYSNQSIMSDNSHLSIDIMDEP
GSSSPSNDEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggaaggagatgattttaatacagaggctgtgatgaacatctgtgatgacctgatggca
gaccagcggatggacatctcgtctacaatgactgacttcatgtcccccagctccactgat
ctcatctccagctccatcagcacgcctggcatggactacaaccgcaagaggaaaggcagc
agcacggactaccaaattgatggcttctcatttgatgacatggattcagataaggataaa
ctggggagtgaccaccagggcaggattaagaatgccagagaggctcacagtcagattgag
aaacgtcggagagacaagatgaacagcttcatcgacgagctggcctctcttgtgcccact
tgtaatgcaatgtcccgcaaactggataagctcacagtcctgcgtatggcggtgcagcac
atgaagacactcagaggtgcggctaacccatacacagaggcaaactacaaaccttccttt
ctgtcagatgatgaactgaagcatttgatactaagggctgctgatggtttcctgtttgtg
gtcggctgcgatcgtggcaaaatcctttttgtttccgaatctgtgtacaagattctgaac
tacagccagaatgacctgataggtcagagtctgtttgactaccttcaccccaaggacatc
gctaaagtcaaagaacagctgtcgtcctcagatacagcgccacgagagagacttattgac
gctaaaaccggtcttcctgtgaagacggatatcactcccggtccatctcgactctgttct
ggagccagacggtcgttcttctgcaggatgaagtgcaacagaccttctgtcaaagtagaa
gagaaagacttcccctccacttgctccaagaagaaagctgaccggaagagtttctgcacc
atccacagcacagggtacctaaagagctggccacccacaaagatggggctggacgaagac
aacgagcccgacaatgagggctgcaacctgagctgcctggtggccatcggccgcctacac
ccccacatcgtcccccagccgagcccagccgacatcagggtgaagcccacagaatacgtc
tccagacacgccattgacggcaagtttgtctttgtcgaccagagagcaacagctatcctc
gcctacctgccccaagagctgctcggaacctccttctacgaatattttcaccaggatgac
atcagccacctggccgagtgtcacagacaagtgctgcagatgagagaaaagatcaacacc
aactgttacaaattcaaaatcaaagatggctccttcatcacgttgaggagcagatggttc
agcttcatgaacccctggaccaaggaggtggagtacatcgtttctactaacacggtcgta
tcgtgtccgataatggaagggtcggattaccctcagtcggctgcgtctccgcagagcatg
gacagcgttctaacctcagagggtggggggagacgggctttgcagaccgttcccggcatc
ccgggcggcacgagagcgggagctgggaagatcggacggatgatagcggaggaagtgatg
gagattcagaggattcgaggttcatctccttccagctgtggttccagccctctgaatata
accagcacccctccgcccgacacctgctcaccggggggcaagaagattcagaacggtggg
acccctgagctgccgagcacagggctaatccctggacctgattctgtgggctacccttac
tccaaccagtccatcatgagtgacaattcccacctgagcatagatattatggacgagccc
ggctccagcagccccagcaacgacgaggcggccatggcggtcatcatgtccctgctggag
gcggacgccggcctcggcggccccgtcgacttcagcgacctaccttggcctttgtga
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