Gambusia affinis (western mosquitofish): 122834945
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Entry
122834945 CDS
T07758
Symbol
irf7
Name
(RefSeq) interferon regulatory factor 7 isoform X1
KO
K09447
interferon regulatory factor 7
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04620
Toll-like receptor signaling pathway
gaf04621
NOD-like receptor signaling pathway
gaf04622
RIG-I-like receptor signaling pathway
gaf04623
Cytosolic DNA-sensing pathway
gaf05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
122834945 (irf7)
04621 NOD-like receptor signaling pathway
122834945 (irf7)
04622 RIG-I-like receptor signaling pathway
122834945 (irf7)
04623 Cytosolic DNA-sensing pathway
122834945 (irf7)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
122834945 (irf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122834945 (irf7)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
122834945 (irf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
122834945
NCBI-ProteinID:
XP_043979459
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All DBs
Position
LG08:14938341..14941445
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AA seq
440 aa
AA seq
DB search
MQSPPKPQFASWLIEQVETGQYKGLCYVDQNKFRVPWKHNSRKDCNDEDSKIFRAWAVAS
GKINEFPNDKARWKTNFRCALNNLSQRFKMVTDNSKNQEDPHKIYEIMNTDSNYEGMPMQ
DSQEESDMTPDIFSPTTEYFPTGNEHNLHQDFMALDLGSQSGEEQLWTQHNNPVLSYLTA
TENLPQYLPADQTAYSQAVNASPVLSSPQTPSLYDLEISIHYRKKEMLKAMLHTNRLQLH
YHSEDPKFNASYLCFPSTEGLLDHKQIEYTNRILSSIQRGLLLEVQETGIYARRHDNCHV
FASTSDPNVAHPNPQKLPKNTVVELLSFDKYVNELKHFKENNGRSPEYTINMCFGEKFPE
GKPLEKKLVVVKVVPLICRYFHDMAQMDGASSLHSDNISLQISHNSLFDLISSVFSLPGA
EEQLTIGVPFIDQTGDLISH
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtccgcccaagcctcagtttgccagttggctcatcgagcaagtggagacgggc
cagtacaaggggctgtgctacgtggatcaaaataaattcagagtgccgtggaagcacaac
tccagaaaagactgcaacgatgaggacagtaaaatattccgggcctgggcagtggcgagt
gggaaaatcaacgagttccccaatgacaaggccagatggaaaaccaacttccgttgtgct
cttaacaacctgtctcagcgcttcaagatggtcacagataattccaagaatcaagaggac
cctcataaaatctatgagattatgaacactgacagcaactatgaaggtatgccaatgcaa
gattcccaggaggaatctgacatgactccagatatattcagcccaaccaccgagtatttt
cccacaggaaatgagcacaatctgcatcaggacttcatggccctggatcttggcagccaa
tcaggagaagagcagttgtggacacagcataataatcctgttctaagttatctcaccgca
actgagaaccttccgcaatatctaccagccgatcagacggcttacagtcaagcagtaaat
gcttctccagtcctcagttcacctcagacgcccagtctgtacgacctggagatctccatc
cattacaggaagaaggaaatgctgaaggcgatgctacacaccaaccgtcttcagctccac
taccacagcgaggaccccaagttcaacgcctcttatctctgctttccttccactgagggc
ctgctggaccacaaacagattgaatacaccaaccgcatactgagcagcatccagcgaggt
ctgctcttggaggtgcaggagaccggtatctacgcccggaggcatgacaactgccatgtg
tttgccagcaccagcgaccccaacgtagcccatccaaacccccaaaaattgcccaaaaac
acagtggtggagctcctcagttttgacaaatatgttaatgagcttaaacatttcaaggag
aacaatggccgctctcctgaatacaccatcaacatgtgctttggagagaagtttccagag
ggaaaaccgctggaaaagaagcttgtcgttgtgaaagtggtgcctctaatttgtcgatat
tttcatgacatggcccagatggatggggcttcatctctccacagcgacaacatcagcctg
cagatttcacacaacagcctctttgacctcatcagctctgtgttttctctgccaggagct
gaagagcaactgaccattggtgtgcctttcattgatcagactggagacttgatttctcac
tga
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