Gambusia affinis (western mosquitofish): 122835061
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Entry
122835061 CDS
T07758
Name
(RefSeq) transient receptor potential cation channel subfamily M member 1-like isoform X1
KO
K04976
transient receptor potential cation channel subfamily M member 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122835061
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
122835061
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
LSDAT_euk
TRPM2
TRPM_tetra
Ion_trans
LSDAT_prok
Glutaredoxin2_C
Copper-fist
Motif
Other DBs
NCBI-GeneID:
122835061
NCBI-ProteinID:
XP_043979713
LinkDB
All DBs
Position
LG08:complement(8486697..8506004)
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AA seq
1665 aa
AA seq
DB search
MDTKGQAGTFKRSSLKRSTSGSQKAQKAWIERTFLKRECVHIFPSKDPTRCACGQLVTQH
VAIPPGANSIAEATPLVQIETPSDKWSVVKHTRTYPTDSYGIIEFQGGGFVNKAMYIRVS
YDTKPDNLLHLMVKDWQLELPTLLISVHGGLQNFDLQPKLKQVFGKGLIKAAVTTGAWIF
TGGVNTGVIRHVGDALKDHSSKSRGKVCAIGIAPWGILENKEDLIGKDVTRPYQSMANPL
SKLAVLNSSHSHFILTDNGTCGKYGSEVKLRRLLEKHISLQKINTRLGQGVPLVCLIVEG
GPNVISITLESLRDEPPIPVVVCDGSGRASDIISFAHKFSEDGGLVNDDVRDQLLVTIQK
TFNYSKSQSQQILLMVMECMKKRELITVFRMGSEGQQDIEMAILTALLKGTNASAADQLS
LALAWNRVDIARNHIFVYGHNLPPAGAIASTTNSAAPTQEKPKSPASAPRSKVRAKKGKG
KGKAKPEPPEETDPRKLELIRWVNSLEQAMMDALVLDRVDFVKLLLENGVNIHHFLTIPR
LEELYNTKLGPANTLHAVVRDVKKGNLPPDYQITLIDIGLVLEYLMGGAYRSNYTRKAFR
NLYNNLYGLKRPKALKLLGMEDDEPRPKGKKKNKKKKEEEVEIDVDDPEVCRFKYPFHEL
MLWAVLLKRQKMALFLWQRGEEAMAKALVACKLYKTMAHECSESELVDDISQDLENNSKE
FGQLAYELLDQSYKRDEQVAMKLLTYELVNWSNSTCLKLAVAAKQRDFIAHTCSQMLLTD
MWMGCLRIGKNPGLKVILGIIFPPLIMLLDFRIGEDTSYQRPGEKEEGKNKDDDAKSSKD
LNNDGTSRKGDEEEGNTNVRKIPIAKRFFEFYDAPFTKFWFNTISYLGYLMLYNYIILVK
MERWPSIQEWMVIAYILTLGTEKVRQILMSEPGKLKQKISVWMEDYWNITDLAAISTFLL
ALMLRLQPEPYMGYGRVIYCIDIIFWYIRVLDIFGVNKYLGPYVMMIGKMMIDMMYFVVI
MLVVLMSFGVARQAILHPDEEPTWRLARNIFYMPYWMIYGEVFADSIDRKTRIHIYAMEI
NPPCGEHLYDEDGKKLPPCIPGAWLTPAIMACYLLVANILLVNLLIAVFNNTFFEVKSIS
NQVWKFQRYQLIMTFHDRPILPPPLIILSHLYILLNRLFRRCIRRNKEGELDEKDRGLKL
RLNPEELKNLYEFEEQCVEEYFREKEDEQQSSSDERIKVTSERVENMSMRLEEVNERENT
MKASLQTVDLRLAQLEELHGRMASALEKLAGLDKLELTRTFSRNSSVCDHSTLLRQGSIN
SADGYSLYRFHMDMEEFATRQKDTDEKVGLERERSMRQASSTCALNVAQTLEVGGLERSR
PSSCVDILISPCEQKLSSGASSQETITNIKQGSTMFLDKLSDQNRLKPLSPAKRAKSLKY
FPAEDQPSSPLIKKRSRSTITVHPPDKPERSAEPTSEAKPQVAPSSSPRRAKSLRDLPVE
SQTSPITRKRAISTIIYDPVEAGDTTQTPADLKHQVHSSGKASSVKNLAQQFQTAASPEE
LEMNHKDVVPSDSEIGQTETEQDEDRKTTKPKRNPSDGTDYLTVADERYTRSHRSQSCNA
SDRKVKPVVFLKEPRASSSERDLAEASRVSALGWEDEEDEGGKNT
NT seq
4998 nt
NT seq
+upstream
nt +downstream
nt
atggacaccaagggtcaggctggcacttttaaaagatcctccctcaaacgcagcacatct
ggctcgcaaaaggcacagaaagcttggattgagaggacattcctgaaaagggaatgtgtt
cacatatttcccagcaaggacccgaccagatgtgcctgtggtcagctggtgacgcaacat
gtggccatccctcctggtgccaattccatagcagaggcgaccccactggtgcaaattgag
acaccgagtgataaatggagtgtggtgaagcacaccaggacctaccctacagactcttat
gggatcattgagtttcagggaggaggattcgtcaacaaggcaatgtacattcgcgtttct
tatgacaccaagcctgacaacctcctgcatctgatggtgaaggactggcagctggagctg
ccaacgttgctcatttcggtgcatgggggtctccagaactttgacctccaacccaaactc
aagcaagtgtttgggaaaggcctgataaaagcagctgtcaccacaggagcttggatcttc
actggcggagtgaacacaggcgtcatccgtcacgttggggatgccttaaaggaccattca
tccaagtcacgagggaaagtgtgtgcaatagggattgctccttggggcatcttggagaac
aaagaggatctcattggaaaagatgtaaccagaccctatcaatcaatggcaaacccactg
agtaagctggcggtgctcaacagcagccattctcatttcatcctcaccgacaacggaacc
tgtgggaagtatggctctgaggtcaaactccgtcggctgttggagaagcacatctccttg
cagaagatcaacactcgtttgggtcagggtgttcctcttgtgtgtttgatagtggaggga
ggtcccaatgtcatctccatcaccttagagagcctaagggatgagcctcccatccccgtg
gtggtctgtgatggcagcggccgcgcttcagacatcatatcctttgcacacaagttttca
gaggatggaggcctggttaacgatgatgtccgagaccagctcttagtcacaatccagaag
acgtttaattatagcaaaagccagtctcagcagatcctgctcatggtaatggagtgtatg
aaaaaaagggagttgattactgtttttcgaatgggctctgaggggcaacaggatattgaa
atggctattctgactgccttgttaaaaggcactaatgcatcagcagcagaccaactcagt
ctggccctggcctggaaccgagtggatattgcccgcaatcacattttcgtttacgggcac
aacttaccacccgctggagccattgccagcacaacaaatagtgctgctccaactcaggaa
aaaccaaagagtccagccagcgctccacgcagcaaggttcgggccaaaaaggggaaggga
aaaggaaaagccaaacctgaacctcctgaggagacagatcccagaaagctggagctaatt
cgctgggtgaactctttggagcaggctatgatggatgctctggtgctggacagagtggac
ttcgtcaaacttctgcttgagaacggggtcaacattcatcatttcctcaccatccctaga
ctggaggagctgtacaacactaaacttggccctgcaaatactctgcatgctgtggttaga
gatgttaagaagggaaatcttcctccagattatcagatcactttgattgatattggtctg
gtgttggaatacctcatgggaggagcttacaggagcaactatacaagaaaggctttccgc
aacctatacaataatctatatggcctaaaaaggccaaaagctttgaagctcctgggaatg
gaggatgatgaaccaagaccaaaaggcaagaaaaagaacaaaaagaagaaggaagaagag
gtggaaatagatgtggatgacccagaggtctgccgattcaagtacccgttccacgagctg
atgctgtgggcagttcttttaaagcgccagaagatggcgttgtttctttggcagcgtggg
gaggaggctatggcgaaggccctggtagcttgtaagctgtataagaccatggcccacgag
tgctctgaaagtgaactggtggacgacatatcccaagacctggagaacaactccaaagaa
tttgggcaactagcttatgagctgttggatcagtcctacaagcgcgacgaacaagtagcc
atgaaactcctaacatacgagctagtcaactggagtaactcgacctgtctgaagctggcg
gtggctgcaaaacagcgggattttatcgctcacacctgcagccaaatgttgctcactgac
atgtggatgggctgtttgaggattggaaaaaatcctggcctcaaggttattctgggaatt
atattccccccactgattatgctcctggacttccgaattggagaggacacttcttatcaa
agacctggagaaaaagaagagggaaagaacaaggatgatgatgcaaaatccagcaaggac
cttaacaatgatgggacttcccgcaaaggagatgaggaggagggcaatactaatgtgcgc
aaaattcccattgcaaaaaggttctttgaattttatgatgccccttttaccaaattctgg
ttcaacaccatttcctatctgggttatttgatgttgtataattacatcatccttgtgaaa
atggagcgatggccatctatacaagagtggatggtcattgcatacatcctcactcttggc
acagaaaaagttcgacagatactgatgtcagaaccaggaaagctgaagcagaagataagt
gtttggatggaggactactggaacatcacagaccttgctgccatctctaccttccttctg
gcgctgatgctgcggctgcagccggaaccatacatgggctatggcagagtcatctactgc
atagacatcatcttctggtacattcgtgtgctggacatctttggagtcaacaagtacctg
ggaccatatgtgatgatgatagggaaaatgatgattgacatgatgtactttgtcgtgatc
atgctggtggtactgatgagcttcggcgtagctcggcaagccattcttcatccggatgaa
gagccgacgtggcgcctggccaggaacatcttctacatgccctactggatgatctatggg
gaggtttttgcggactcgatagaccgtaagactagaattcatatctatgcaatggaaatt
aatcctccgtgtggagaacatttatatgatgaagatgggaaaaagcttcctccatgcatc
cccggtgcatggctcacgcctgcaattatggcttgttatcttctcgttgcaaacatcctt
ctggttaacttgctcattgccgtcttcaacaacaccttctttgaagtcaagtccatctcc
aaccaggtctggaagtttcaaagataccagctaatcatgactttccacgaccgcccaatc
ctgcctccacctctcatcatcctgagtcacctctacatcctcttaaacaggcttttccgg
cgttgcatcaggagaaataaggaaggagagcttgatgagaaggatcggggcctcaagctc
agactaaatccagaggagctaaagaatctgtatgagtttgaggaacagtgcgtggaggaa
tacttccgggaaaaggaagatgagcaacagtcttcaagtgatgaacgcatcaaggttact
tcagagagagttgagaacatgtcaatgcgtctggaagaggtcaatgaaagggagaacacc
atgaaagcatctttgcagacagtagacctgcgtctggcccagctggaagagctccacgga
cgtatggcttccgcattggaaaagcttgcagggctggacaaactggagctaactagaacc
ttctctagaaactcatctgtgtgtgatcattccactctcctccggcagggcagtattaac
agtgcagatggttacagtctctaccgcttccacatggacatggaagagtttgcaaccagg
cagaaggacacagacgagaaagtaggcctcgagagagagcggagtatgcgtcaagcctcg
agcacttgtgctctcaatgtagcacagacgctagaggttggtggtttggagagatcgcga
cctagctcatgtgtggacattctcatatctccatgtgaacagaagctttcatctggggct
tcaagccaagagaccataaccaacataaagcaaggcagcacaatgtttctggacaaactg
tcagaccaaaacaggctaaaacctttatcgcctgccaaaagggcgaagtccctgaaatac
tttcctgctgaagaccagccctcctctcctttaataaagaaaagatctaggagcaccatc
actgtccacccccctgataaaccagagagatctgctgagcctacaagcgaggcaaaacct
caggtagcaccttcctcttctccaaggagggcaaaatctctaagagatcttccagttgaa
agtcaaacgtctcccatcactaggaagagggctatcagcaccatcatctacgatccagtt
gaagcaggtgatacaactcaaacgccagcagatttaaagcatcaggtccattctagtgga
aaagcatcatcagtcaaaaacctcgctcagcagttccaaactgctgcttcacctgaagag
ttagaaatgaatcacaaagatgtagttccttcagatagtgagataggacaaacagaaacg
gagcaggacgaagaccgcaagacaacaaagcccaaaagaaacccttcggatggtaccgac
tacctgactgtagccgatgaaaggtatacgaggtctcacaggtcacagagctgcaacgcc
agtgacagaaaagtaaagcccgtggtgttcttaaaagagccgagagcctccagcagtgag
cgagacctcgccgaagcaagcagagtgtcagcccttggatgggaagatgaagaagatgaa
ggcgggaaaaacacatga
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