Gambusia affinis (western mosquitofish): 122835086
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Entry
122835086 CDS
T07758
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122835086 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122835086 (nup93)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
122835086 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
122835086
NCBI-ProteinID:
XP_043979758
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Position
LG08:252174..267565
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AA seq
820 aa
AA seq
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MDAEGFGELLQQAEQLAAETEAVSELPHVERNLQEIQQAGERLRSRTLTRTSQDAADVKA
SILLGSRGLDIFHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLAAIEESRRR
TFLLAEEYHRESMLVQWEQVKQRVLHTLLGAGEDALDFSQDVEPSFVSEAAAPGRSALNS
VEVAYGRQIYVFNEKIVSGHIQPSLGDLCAAAAAAMDDKNVSDLWLMVKQMTDVLLVPAR
DTLKSRTAVEMQMAFVRQALGFLENRYKSFTMGTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGMQDGEVEGQPVWAVIYYCLRCGDLNAAMTVVSRAQHQLGDFKSWFQEYMSSP
DKRLSPASENKLRLHYRRALRNSADPYKRAVYCLIGKCDVNDSHGEVADKTDDYLWLKLN
QVCFDDDSSSSPQDRLTLPQLQKQLLEDYGESHFSASQQPFLYFQVLFLTAQFEAAVAFL
FRVERLRSHAVHVALVLYELRLLLKSSGQSAQLLSQEPGDPPMIRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGKLEKDGSRKPGIID
KFAGDTRTIISKVALEAENKGLFEEAVRLYELAKNPDKVLELMNRLLSPVIAQVSAPQSN
KERLKNTAVVIAERYRSQGTAAEKSINSTFYLLLDLMTFFDEYHAGHVDRAYDVMERLKL
LPLSQDSVEERVAAFRNFSDEVRHNLSEVLLATMNILFTQYKRLKGAPAGAPGRSPRTVE
DRGTQLRLQARALITFAGTIPYNMAGDTNARLVQMELLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggacgcagaaggctttggggagctgctgcagcaggccgagcagctggctgcagaaacc
gaagctgtgtctgagctgccgcacgttgagaggaacctccaggagatccagcaggccgga
gagcgactccggtccagaaccctgacccggacctcccaggatgcagctgatgttaaagcc
tccatcctgcttgggtccagaggcctggacatcttccatatctcccagagactggagagt
ctgagtgctgccaccaccttcgagccgctggagccggtcaaagacaccgacattcagggc
ttcctgaagaacgagagggacaacgctctgctggccgccatcgaggagtcccgccgcagg
accttcttgctggctgaggagtaccaccgggagtccatgctggtccagtgggagcaggtg
aagcagagggtgctgcacacgctgctgggggccggagaagacgcgctggacttcagccag
gatgtggagcccagctttgtgagcgaggcggcggctccgggccgcagcgccctgaacagc
gtggaggtcgcctacggacgccagatctacgttttcaacgagaagatcgtcagcggacac
atccagcccagcctgggggatctgtgtgccgccgccgccgccgccatggacgacaagaac
gtgtcggatctctggctaatggtcaagcagatgaccgacgtgctgctggttccagccaga
gacacgctgaaaagtcgcaccgccgtggagatgcagatggccttcgtacggcaggcgctc
ggcttcctggagaaccggtacaagagcttcaccatgggaaccgtgttcggcaacctgcat
caggcacagctgggcggcgtgcccggcacctaccagctggtccgaagcttcctcaacatc
aagctgccagggccgctgccgggcatgcaggacggcgaggtggagggccaaccggtctgg
gccgtcatctactactgcctacgttgtggcgacctgaacgccgccatgacggtggtgagc
cgggcgcagcatcagctgggagacttcaagtcctggttccaggagtacatgagcagcccg
gacaaacgcctctctccggcgtcggagaacaagctccgcctccactaccgcagagctctg
aggaacagcgccgacccttacaagcgggccgtctactgcctgatcggcaagtgcgatgtc
aacgacagccacggggaggtggcggacaagacggatgactacctgtggctgaagctgaac
caggtctgcttcgacgatgacagcagcagctctcctcaggaccgactgacgctgccgcag
ctgcaaaagcagctgctggaagactatggagagtcccatttctcggccagccagcagccc
ttcctgtacttccaggtgttgttcctgacggctcagttcgaggcggccgtggccttcctg
tttcgggtggagcggctgcgcagccacgccgtgcacgtggccctggtgctgtacgagctg
cggctgctgctgaagtcgtcgggtcagagcgcccagctgctgagccaggagcctggagac
ccgcccatgatccgccgcctcaacttcatccgcctgctgatgctctacacgcgcaagttt
gagtccaccgacccgcgggaggccctgcagtacttctacttcctgcgcaacgagaaggac
agccagggggaaaacatgttcatgcgctgcgtcagcgagctggtcatcgagagtcgagag
tttgacatgctgctaggaaagctggagaaagatggcagcaggaagcccggcatcatcgat
aagtttgcaggcgacaccagaaccatcatcagcaaagtggctctggaggccgagaacaag
ggtctgtttgaggaggcggtgaggctgtacgagctggccaagaacccagacaaggttctg
gagctgatgaacaggttgctgagtccggtcatcgctcaggtcagcgctccgcagtccaac
aaggagaggctgaagaacacggccgtggtgatcgccgagaggtatcgctctcagggcaca
gccgctgagaagtccatcaacagcaccttctacctgctgctggacctcatgaccttcttc
gatgagtaccacgcggggcacgtggaccgagcctacgacgtgatggagcgtctgaagctg
cttcctcttagccaggacagcgtggaagaacgagtggcggccttcaggaacttcagtgat
gaggtgcgtcacaacctgtctgaagttctgctggccaccatgaacatcctgttcacccag
tacaaacgcctgaagggggcgccggcaggcgcaccgggccgctcacccaggaccgtggag
gaccgagggacgcagctgcgccttcaggcccgagcgctcatcaccttcgccgggacgatt
ccctacaacatggccggagacaccaacgccaggctggtccagatggagctgctgatgaac
tga
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