Gambusia affinis (western mosquitofish): 122835116
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Entry
122835116 CDS
T07758
Symbol
zgc:173742
Name
(RefSeq) DNA topoisomerase I, mitochondrial
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
gaf03032
]
122835116 (zgc:173742)
Enzymes [BR:
gaf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122835116 (zgc:173742)
DNA replication proteins [BR:
gaf03032
]
Eukaryotic type
DNA Topoisomerases
122835116 (zgc:173742)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_I
Topoisom_I_N
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
122835116
NCBI-ProteinID:
XP_043979808
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Position
LG08:827987..843977
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AA seq
738 aa
AA seq
DB search
MGRESDAKGDAKLKQKGTKLKRLSDRENAGSGGDLTKKRSTKSKEKKNNDGSPKKVMEIL
EPVSSSSDLVKLELQDDLTEKKKKKGLKRKRVKDEPIEEAAASIPERGIKPLSDEEASEE
ETQKNESKKKPRKTVKKEEGDQPATKKPRKSKEEIEEAKMLKMKQKEEEEQSRWRWWEEE
RYKDGVKWKSLEHNGPYFPPEYEPLPDNVNFFYNGQKMKLSLAAEEVALFFAQMLDHEYT
TKKVFRENFFRDWRKEMTHQERLVITDLEKCDFKELHALHKDKVEARKALSKEEKQAQKD
ANQKIVDKYGYCLLDSHRERIGNFKLEPPGLFRGRGEHPKQGMLKKRIQPEDVIINCSKD
TEPPAPPAGHRWKEVRHDNTVTWLASWTENVQGSIKYIMLNANSKLKGEKDWEKYEVARK
LRSFVDSIRDGYLHDLKSKQMVARQRAVALYFIDKLALRAGNEKEEGETADTVGCCSLRV
EHITLHDELDGNECVVEFDFLGKDSIRYYNKVPVIKKVFKNIKLFMENKDPEDDLFDRLN
TALLNKHLSSLMPGLTAKVFRTYNASITLQQQLQQLTNKSDNVAEKLLSYNRANRAVAIL
CNHQRSPPKTFEQSMANLHSKIVARKEQLALAKTELKLAKKEMKTKGSADSKLQSMVDRK
AAAVKRCEDQLLKMELQATDREENKQIALGTSKLNYLDPRISVAWCKNMDVPIEKIYNKT
QREKFAWAIDMTEADFEF
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagaaagcgacgctaaaggagatgcaaagttgaagcagaaagggacgaagctg
aaacggttgagtgaccgtgagaatgccggttccggtggagatctgacaaagaaaaggtca
acaaagtccaaagagaagaagaacaatgacgggtctcctaagaaggtcatggaaatcctg
gagccggtcagcagctccagtgatttggtgaaactcgagctgcaggacgacttgactgag
aagaagaagaagaaaggattgaaaaggaaacgtgtgaaagacgagccgatagaggaagca
gctgcatccatcccagagagaggaatcaaacccctcagtgatgaagaagcaagtgaagaa
gaaactcagaaaaatgaatccaagaagaaacccagaaagacggtcaagaaagaggaagga
gatcagccagccaccaaaaaacccaggaagtcaaaggaggagatcgaagaagccaaaatg
ctgaagatgaagcagaaggaagaggaggagcagagccgctggagatggtgggaggaagag
cggtacaaagacggagtgaaatggaagtccttggagcacaacggaccttacttccctccg
gagtacgagcctcttcccgacaacgttaacttcttctacaacggtcagaagatgaagctg
agcctggcagcagaggaggtggcgcttttctttgcccagatgttggaccacgaatacacg
accaagaaggtgtttcgtgagaacttcttcagagactggaggaaggagatgacccatcag
gagcggttagtgatcacagatctggagaagtgtgacttcaaagaactccacgccttgcat
aaagacaaggtggaagccaggaaggctctgagcaaagaggagaagcaggctcagaaagat
gccaatcagaagatcgtggataaatatggctactgcctgctggatagccacagagaacgc
atcgggaattttaagttggagcctccgggtctgttccgagggagaggagagcatcccaag
cagggaatgctgaagaaacggatccaaccggaagatgtcatcatcaactgcagcaaagac
accgagccacctgcgccccctgctggtcaccgctggaaggaagtacggcacgacaacacc
gtgacgtggctggccagctggaccgagaacgtccagggatccattaaatacattatgctc
aacgccaactccaaactgaagggagagaaggactgggagaaatacgaggttgctcggaag
ctcaggtcattcgtggacagcatccgggacggttacctccacgacctcaagtccaagcag
atggtggcgcggcagagagccgtggccctgtacttcatagacaagctcgccctgagagcg
ggaaacgagaaggaggagggcgagacggcggacacggtcggctgctgctcgctgcgcgtc
gagcacatcacgctccacgacgagctggacggcaacgagtgcgtggtggagttcgacttc
ctggggaaagactccatccgctactacaacaaggtgccggtcatcaagaaggttttcaag
aatattaagcttttcatggagaacaaggatcctgaagacgatctcttcgaccgtctaaat
acggccctcctgaacaaacacctgagctctctgatgccaggcctgactgccaaggtgttc
aggacgtacaacgcctccatcaccctgcagcagcagctgcagcagctcaccaacaagtct
gacaacgtggcggagaagctgctgtcctacaacagagccaacagagccgtcgctattctc
tgcaaccaccagcggtcgccgccaaaaaccttcgaacagtcgatggccaacctgcactcc
aagattgttgctagaaaggagcagctggctctagccaagacggagctgaaactggccaag
aaggaaatgaaaaccaaaggcagcgcggacagcaagctgcagagcatggtggacaggaag
gcggcggcggtgaagcgctgtgaggaccagctgctgaagatggagctccaggcgacggac
agagaggagaacaagcagatcgccctcggtacctccaagctcaactacctggacccgcgg
atcagcgtggcctggtgtaagaacatggacgtacccatagaaaagatctacaataaaacc
cagagggagaagttcgcctgggccatcgacatgacggaggccgacttcgagttctga
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