Gambusia affinis (western mosquitofish): 122835259
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Entry
122835259 CDS
T07758
Name
(RefSeq) PDZ domain-containing RING finger protein 4-like isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122835259
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122835259
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
122835259
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
PDZ_Tricorn
Siah-Interact_N
Motif
Other DBs
NCBI-GeneID:
122835259
NCBI-ProteinID:
XP_043980083
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Position
LG08:complement(21129245..21262286)
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AA seq
855 aa
AA seq
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MNSTEEERSCVESLRSVKRALEERGAGLERASRMARLRWNRREQLLVAQVATLQNEAQLA
AFTYQQRLKRYLLHISSIAEQIAGYCKSDSSTAADMQTHTSDHSTTGKLQKTVEERQVNG
KELSKSSHDETVEAFRAARDPVVVQVIRRTPSGRPHGPPQEIHVVDVCTQTDITFEHIMA
LAKLRPSTPPVPDVCPFLLSDSCHSLHTMDQDYYEGTDYLSPVPADGDRTEEFEYEEVEL
CRLSCHEKLGLTLCYRTDEEEDVAIYVSEVSPNGIAARDGRIREGDRILQINGNDVQDRE
EAMAALSSDDFKNIILLVARPEMQLEEAWLDDEHSEFLEQLKMEMLEEQQREEMELAALQ
EEQEKQQRSEDDKPSCSTFSYSRDSLQSLKEKKENSDHNVLAQIQRRLSRCLRDSQDSHC
TNGSKRLEDKDDEDNDESEGDRFQQLLELKCQIRNSGEYDLFYSRRSTIECSMAEQSDVQ
HELRMLNEELRSIELECQNIMQAHKLRKSQQSPLMGHSAPSIKSQSPKHGESVKGKLGDI
NERMEKSDKDSSSAYNTAESSRSTPLAMDRSPEHSLQRMVSLTNQRNLYGGFATGHSPSP
LPTCRTPVLGKSSSPDHSNPSESDQTPQAEEEGKKKLKQCTSQIPYFSPSHSSQQRQANI
PAHARHYQSYMQLIQQRSAVEYAQSQLSLLSVCKEPQRPINEPKMEWKVKIRSDGTRYIT
KRPVRDKILRERALKIKEERSGGMTTDDDAMSEMKMGRYWSKEERKQHLVRAKEQRRRRE
FMQRSRLESLKENPQSSSEGRKEVSIIELSHKKMLKKRNKKILDNWMTIQELMTHGTKAP
EGAKVHNAFLSVTTV
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcacggaggaggagcgctcctgcgtggagtcgctccggtcagtgaaacgcgcg
ttggaggagaggggcgcaggtttggagcgggcatcccggatggcgcggctcaggtggaac
aggagagagcagctcctggtggctcaggtggcgacgctgcagaacgaagctcagctcgct
gcctttacgtatcagcagcgattgaagcggtacttgctgcacatcagcagcatcgcagaa
cagatcgctggatactgtaagagtgattccagtacagccgctgacatgcagacacacaca
tcagaccactcaactacaggaaagctgcagaaaactgttgaggaacgtcaggtaaatggg
aaggagttgtccaaatccagccacgatgaaactgtggaggccttccgagctgccagggac
cccgtcgtggtgcaggtcatcaggcgtaccccgagcggccgtccccacggcccccctcag
gaaatccatgtggtggatgtgtgcactcagaccgacatcacctttgaacacatcatggcg
ctggcaaagctccggccttcaacccctcctgtgcctgacgtctgtcccttcctgctctct
gacagctgtcattcccttcatacaatggaccaagattactatgaaggtaccgactacctc
tcccccgtcccagctgacggagacagaacggaggagtttgagtacgaggaagtcgaactt
tgtcgtctcagctgtcatgaaaaactaggcctcactctgtgctatcgaacggatgaagaa
gaggatgtggccatctatgtcagtgaggtgagtccgaacggcattgccgccagagacggg
cggatccgagaaggggatcgaatcttacagataaatggcaatgatgtgcaagacagagaa
gaagcgatggctgctctctccagtgatgacttcaagaacatcatactactggtcgcccga
cctgagatgcagctggaagaggcttggctggatgatgagcatagtgagttcctggagcag
ctgaagatggaaatgttggaggagcagcagagagaggagatggaattagctgccttacaa
gaagaacaggaaaagcagcagagatccgaagatgacaagccttcctgttcaacattttct
tactcaagagacagcctgcaaagtctgaaagagaaaaaggaaaactcagaccacaacgtc
ttagcccaaatccagagacgcctgtcccggtgcctacgggacagtcaggactcccattgt
accaatggtagcaagcgactggaggacaaagacgacgaggacaacgatgagtcagaggga
gatcgtttccagcaacttttggagctaaaatgtcagatacgcaacagcggcgagtacgac
cttttctacagccgccgcagtactattgagtgcagcatggcggaacagagcgatgtgcaa
catgagctgcgtatgctaaatgaggagctacgcagtattgaacttgagtgtcagaacatt
atgcaggcccataagctgcgcaagagtcagcaatctcccttaatgggacattctgcgccc
tccatcaaaagtcaaagccccaaacatggagagtctgttaagggtaagctgggggacatt
aatgagaggatggaaaagtctgacaaggacagctccagtgcctacaacactgccgagagt
tctcggagcacgcccttggcgatggaccgctccccagagcactctctccagagaatggtc
agtctcaccaaccagaggaacctctatggcggctttgctaccggtcactcaccaagcccc
ttaccgacctgcagaacccctgttctgggcaaaagcagcagccccgaccacagtaaccct
tcagagtcagatcagacacctcaggctgaggaggagggtaaaaaaaagttaaaacaatgc
acttcccagattccttacttctctccttcccacagttcccagcagaggcaggccaacatt
ccagcccatgcccgccactaccagagctacatgcagctgatccagcagcgttcagctgtt
gagtatgctcagagccagctcagcctgcttagtgtctgcaaagagcctcagagacccatt
aatgaacccaagatggagtggaaagtcaagatccgcagcgatggcacccgctacatcacc
aagaggcctgtgagagacaagatcctgagagagcgggccttgaagattaaagaggagcgc
agtggggggatgacgacggatgacgatgcaatgagtgagatgaagatggggaggtactgg
agtaaagaggaaaggaaacagcacctggtcagggcgaaagaacagaggagaagacgagaa
ttcatgcagcgtagtcggctggaaagcttgaaggagaaccctcagagcagcagcgaaggt
cgaaaggaagtcagcattatagagctcagccacaagaagatgctgaagaaacgcaataag
aagattttggacaattggatgaccatccaggagctgatgacacacggcactaaggccccc
gagggagcaaaggtgcataatgccttcctctcagtcactactgtatag
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