Gambusia affinis (western mosquitofish): 122835264
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Entry
122835264 CDS
T07758
Symbol
lamb4
Name
(RefSeq) laminin subunit beta-4 isoform X1
KO
K06245
laminin, beta 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04510
Focal adhesion
gaf04512
ECM-receptor interaction
gaf04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122835264 (lamb4)
04518 Integrin signaling
122835264 (lamb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
122835264 (lamb4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
EGF_LMN_ATRN
LAMB1
LAMB4
LAMININ_IV_B
DUF7630
F5_F8_type_C
Sft1-BET1
Motif
Other DBs
NCBI-GeneID:
122835264
NCBI-ProteinID:
XP_043980096
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All DBs
Position
LG08:complement(19163678..19184287)
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AA seq
1788 aa
AA seq
DB search
MILIFIFVCLPAVKPQDLQDQCPGGSCHPQLGDLMVGRGAQLSASSTCGEDGPQNYCIVG
YLEGEKKCFTCDSRLPFSPQGNPQSHRIENVITTFDSDRRLKWWQSENGLHQVSIQLDLE
TVFQFSHLVLTFKSFRPAAMLVERSKDFGRSWKVFRYFADDCSLHFPSVPAEPASFIDDV
VCDSRYSGPEPSTGGEVVLKALDPVFEIDDPYAPNIQELITLTNIRVNFTRLFTLGDTLL
ARRRRNPQEKYYYSLYSMVVQGSCFCNGHASRCVPVDGGRGDVFTQSGMVHGRCVCQHNT
AGENCERCQPFHNDSPWKPGGETTPNSCRRCNCHGHSDSCHFDAARYEETRGASGGVCDD
CRHDRTGPQCERCRPFLYQDPQRALEDPHACIPCDCDPAGSHSGGLCDASSGRCFCKENV
EGQRCDRCKHGFFDLRSDNPAGCDVCRCHGLGSVGPCDPLTGSCKCEPMATGPLCDHCVA
GFWGLGNSVFKCSPCDCDVGGASSNMCSPEDGQCSCLPNMVGRRCSDPAPGYFLPSLIYF
LYEAELAAQLTGGSSSPTPHAPLPAIPSSSPLVDPSLLPSCEQYFRSQGYDFQLSDGKVI
LIRRPRRLTRRRRRQNTSPLNRGPLQILPHQGSPEQSGTGLGLVRVTEGAGLRFTVDNLP
TSMEYQLVIRYESESVTDWVARVNIITLSPGDGGCRDDPPPGSLTLILPRSSRLGILDSR
VCLNARGRYFVEIFFDRQQRSDNAPLLVDSMGLVQSFYSVRDFCSQRDFDSFGHFRCVGL
DVYLGSQESLPKICEGLIKSLSARIHHGAVACRCDVIGSLGSGCSTLGGLCECKPSVIGR
CCDACAPLTFGFGPGGCKRCECDPQGSLSEACDPSGGQCACRPRVSGRRCDRCESGFWGF
PLCQPCDCNGLSETCDGRTGECVNCREHSSGPHCDRCVEGYYGNPVSRQPCQPCLCPDIL
SSGRFFASSCRYDPQSVSVSCSCREGHTGEQCDSCSPGFYGDLRLPGAICRACSCNNNID
PDDSEACDGTTGECLRCLHYTTGPQCQFCKPGYYGNALQHNCKECSCDRRGTKATLCPLE
SPCFCNRETGQCPCRTGVVGNLCDECEDGFWNLDGASGCKPCSCDPSNSISNICDKVSGK
CPCRPEFGGRQCDECGENYFGNPDLQCFSCGCNLAGTQYPSCDPETGECICRPGVTGVLC
DECAPGYSSAFPACEKCHECMVLWTENVTDVQRAAQRMRTFIPLHGNTEHPSHSQYWQRI
LEMHSRLDSVGNMTGFSLPKLEKVEKLYMKIRKLKEAVDTNIILIDPSVLLNNEINNINV
EFQKMLKNLKDKLIKDPNKKETQPVEVFHSVAEMLQEIQKLHKTFMSDEKRVRNSNKAVE
DSMDTRRETKRKLSMCSSRGDLATLEKKVKELNMRQLNQKVCGRPDPEDCSGCPEGQICD
GAAPDAQKASEMAEKVKEQLVKFPSSLDESKKKISDVQQVALDTKDQAQDLQHQISDTTE
SMEREKNKTRELLQRVKQYLMDEMVPPGDIEKMANAVLRIQLPRSPAEIQTMINEINNLL
NGATKFQEDLKKLQDEAKAAQELLQKATEVKEQTKNINFRDILSDIVAADTAQSKANDDL
EVANKDRDDAKDRLQEVKNKLNRIEDKRMNQTVGLLEEIEALKSKTEQNREMAKEARETA
ESALTNVSNDAELQDVQEQFELLKQKHLNKTLEDQATDRLQEILKEIEDMQRQMEDRLQQ
IEDVEQKIQLLIQRKEEKIVEVAEMLKTVESLQKEIASRAQYYATCSS
NT seq
5367 nt
NT seq
+upstream
nt +downstream
nt
atgatcctcatctttatttttgtttgtctgccggcggtaaaaccccaggacctccaggac
cagtgccctggcggctcctgtcacccccagcttggtgacctgatggtgggacggggagcg
cagctctcagcctcgtccacctgcggagaggacggaccccagaactactgcatcgttgga
tacctggagggggagaaaaaatgtttcacatgtgactcccgactgccgtttagtccccaa
ggcaacccacagagccatcgtatcgagaacgtcatcacaacgttcgactccgacagacgg
ctgaagtggtggcagtctgagaacggacttcatcaagtcagcatccagttggacctggag
actgtcttccagttcagccacctggtcctcacctttaagagcttcaggcctgcagccatg
ctggtggagcgttcgaaggattttggacgaagctggaaagtttttcgctactttgcagac
gattgttcccttcattttccttcagttcctgcagaacctgccagcttcattgacgatgtt
gtctgtgacagcagatactctggaccagaaccatccacaggtggagaggtggtgctaaaa
gctctggatcctgtctttgaaatagatgacccatatgctccaaacattcaagagctgatc
accttgacgaacatccgtgtgaacttcactcgtctcttcacgcttggtgacacgctgctg
gctcgcagacgcagaaatcctcaggagaaatattactactcgctttacagcatggtggtt
cagggaagctgcttctgtaacggacacgccagccgctgcgtccctgtggacggaggacgt
ggggacgtcttcactcagtctggcatggttcacggtcgctgtgtctgtcagcacaataca
gctggggagaactgtgagagatgtcagccgtttcacaatgactccccctggaagcctgga
ggagaaactacacccaacagctgcaggaggtgtaactgtcacggtcactcagactcttgt
cattttgatgctgctcgctacgaagagaccagaggtgcaagtggcggcgtgtgtgacgac
tgccgccatgacaggacggggcctcagtgcgagcgctgtagacctttcctgtatcaggac
ccgcagagggcgctagaggacccccatgcctgcataccgtgtgactgcgatcccgccggc
tcacacagcggcggtttgtgtgatgcgtcaagcggtcggtgtttctgtaaggaaaacgta
gagggtcaacgctgtgatcgctgcaaacatggtttcttcgatttgagatcggacaacccg
gctgggtgtgacgtctgcaggtgccacggtttgggaagtgttgggccatgcgatccgctt
acagggagttgtaaatgtgagccaatggccaccgggccgctgtgtgatcattgtgtggca
ggtttctggggtttgggaaactccgtgttcaaatgttcaccctgtgactgtgatgttggc
ggagctagcagtaacatgtgttctccagaggatggacagtgttcctgtttacccaacatg
gtgggccggcgctgctctgaccctgcacctggttacttcctgccttcgctcatctacttc
ctgtatgaggcggaactcgctgcacagctgacaggagggagttcctcccctactcctcat
gctcctcttcctgctattccctcttcctctccactggtggatcccagccttttgccttca
tgtgagcagtatttcagaagtcagggctatgacttccagctctccgatggaaaagtgatt
ttgatacggaggcctcgtcgcctcacccgtcggaggagacggcagaataccagccctttg
aaccggggacccctgcagatccttccccaccagggctcacctgagcagtcaggaactggt
ctgggattggtcagagtgacagagggggcggggcttagattcactgtggacaacctgcca
acatcgatggagtaccagctggtgatccgctatgaatccgagtctgtcaccgattgggtg
gcgagagtgaacatcatcacgctgtcaccaggcgacggaggctgcagggacgaccctcca
ccaggaagtctgacactgatcctccccagaagctccagattaggtattctggattcccgg
gtgtgtctgaacgccagaggtcgatactttgtggagattttctttgacaggcagcaaaga
tcagacaacgctcctctgctggtcgactcgatgggactggttcagagtttctattcagtc
cgagacttttgctcccagagggactttgactctttcggtcactttcgctgcgtcggattg
gacgtgtacctcggttctcaagagtcacttccaaaaatctgcgaagggctgatcaagagt
ctgtcggcgcgcatccaccacggagctgtggcctgcaggtgtgacgtcattggttctctt
ggatcgggatgcagtacgctgggcgggttatgtgaatgtaagcccagcgtgatcggacgt
tgctgtgacgcttgtgcacctctgacctttgggtttggacctggaggctgtaaacgatgc
gagtgtgaccctcaaggctctctgtcggaggcgtgtgatccgagcggaggtcagtgtgcg
tgtcgcccccgggtatcgggtcgacgctgcgatcgatgcgagtctggattctggggattc
ccgctgtgtcagccctgtgactgcaacggcctgtcggaaacctgcgatggacggactgga
gagtgtgtgaactgcagggagcacagcagcgggccgcactgtgacaggtgtgtggagggt
tactatggtaaccctgtctccaggcaaccctgtcagccctgcctgtgccctgatatcctg
agcagcggacggttctttgcctcctcctgccgatacgacccgcagtccgtcagtgtgagc
tgctcctgcagggagggacacacaggtgaacaatgtgacagttgcagtccgggtttctac
ggcgacctgaggttgccgggtgccatttgcagggcgtgctcctgcaacaacaacatcgac
ccggacgacagcgaagcctgcgacggcacaacaggagaatgtctccgctgccttcactac
acaacgggtccacagtgccagttctgcaagcctggttactatggcaacgccctgcaacac
aactgtaaagaatgctcctgtgaccgccgggggaccaaggcgactctatgtcccctggag
agcccctgcttctgcaacagggagacgggacagtgtccctgcaggacgggtgtggtggga
aatctctgtgatgaatgtgaggacgggttctggaacctggacggagcgtcgggatgcaag
ccctgcagctgcgacccgtctaactccatctctaacatctgcgataaggtgtcgggaaag
tgtccctgtcgtcctgagtttggaggaagacagtgtgatgaatgtggagaaaactatttt
gggaatccagacctgcagtgcttttcttgtggctgtaaccttgcgggaacgcagtacccg
tcgtgtgaccctgaaactggtgagtgcatctgtcggcctggcgtcaccggtgtcctctgt
gacgagtgcgctccaggctacagttcagcgtttcctgcctgtgagaaatgccatgaatgc
atggttctgtggaccgaaaacgtcactgacgtccagcgagccgcccaaaggatgaggacg
ttcatccctctccatggcaacaccgagcatccctctcacagtcagtactggcaacggata
ctggagatgcactccagactggacagcgttggtaacatgactggtttctctctgccaaag
ctggagaaagtagagaaactctacatgaagattaggaagctgaaagaggctgtcgacacc
aacataattctgatcgacccgtctgtcctccttaacaatgaaatcaacaacattaatgta
gagtttcagaagatgctaaaaaacctgaaggataaactcatcaaggatccaaacaagaaa
gaaactcagccagtggaagtgttccactctgttgcagagatgctgcaggagatccagaag
cttcataaaaccttcatgtcagacgaaaagcgggtgagaaactccaataaagccgtggag
gactccatggacaccagacgggagactaagcgcaaactgagcatgtgcagcagcagagga
gacctggcaactctggagaagaaggtcaaggagctcaacatgcgccaactcaaccaaaag
gtctgcgggcggccggatccggaggactgctccggatgtcctgaaggtcagatctgtgat
ggagctgctcccgatgcccagaaagcttctgagatggcagagaaagtaaaagagcaactc
gtcaaattcccatccagcctggacgagtcgaagaaaaagatcagtgacgtccagcaagtg
gctctggacaccaaagaccaagcccaagacctgcagcaccagatcagcgacaccaccgaa
tcaatggagagagagaaaaacaaaaccagagagctcctccagagagtcaaacaatatctg
atggatgaaatggttcctccaggtgacattgagaaaatggccaacgctgtcctgaggatc
cagctaccgcgatcacctgctgagatccaaacgatgatcaatgagatcaataatcttttg
aacggtgccaccaaattccaggaggacctgaagaagctgcaggatgaagccaaagcagct
caggagcttctgcagaaagcgacagaagtcaaggagcaaactaaaaacatcaactttaga
gacatcctcagtgacattgttgctgcagacacagctcagagcaaagccaacgatgacctg
gaggttgcaaataaggacagagacgacgccaaagaccgactccaagaggtgaaaaacaaa
ctgaaccgcattgaggataagcggatgaaccagactgtaggtctgctggaggagattgaa
gctctgaaaagtaaaacggagcagaacagagagatggcaaaagaggccagagaaactgct
gagtcagcgttgaccaacgtttctaatgacgcggagctgcaagacgttcaggagcagttt
gagcttttaaagcagaagcacttgaataaaacacttgaagaccaagccacagatcgactg
caggaaatcctgaaggagatcgaagatatgcagagacaaatggaggacagactccaacag
atagaagacgtggagcagaagatccagctgctgatccagaggaaggaggagaaaatagtc
gaggtggccgagatgctgaagacggtggagtcacttcaaaaggaaatcgcctctagagcg
caatattacgccacatgttcctcataa
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