Gambusia affinis (western mosquitofish): 122835292
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Entry
122835292 CDS
T07758
Symbol
tpm1
Name
(RefSeq) tropomyosin alpha-1 chain isoform X1
KO
K10373
tropomyosin 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04260
Cardiac muscle contraction
gaf04261
Adrenergic signaling in cardiomyocytes
gaf04814
Motor proteins
gaf04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122835292 (tpm1)
04820 Cytoskeleton in muscle cells
122835292 (tpm1)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122835292 (tpm1)
04261 Adrenergic signaling in cardiomyocytes
122835292 (tpm1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122835292 (tpm1)
04147 Exosome [BR:
gaf04147
]
122835292 (tpm1)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
122835292 (tpm1)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of microglial cells
122835292 (tpm1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
CCDC39
Rod_CreS
TMF_DNA_bd
DUF745
Sec2p
ATG16
DUF3450
ERM_helical
CENP-F_leu_zip
FKBP15
Lebercilin
PUMA_CC
CC_Bre1
HAUS1
Laminin_I
SlyX
DUF16
DUF1664
TMP_N
FPP
Motif
Other DBs
NCBI-GeneID:
122835292
NCBI-ProteinID:
XP_043980154
LinkDB
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Position
LG08:9132069..9144584
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AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEQAESDKKAAEDRSKQLEDDLVALQKKLKGTEDELDKY
SEALKDAQEKLELAEKKATDAEADVASLNRRIQLVEEELDRAQERLATALQKLEEAEKAA
DESERGMKVIENRAMKDEEKMEIQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSESKCSELEEELKTVTNNLKSLEAQAEKYSQKEDKYEEEIKVLTDKLKEAETRAE
FAERSVAKLEKTIDDLEDELYSQKLKYKAISEELDHALNDMTSI
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgctcaagctcgacaaggagaatgccttggac
agagctgagcaggccgagtcagacaagaaagcagcggaggacagaagcaaacagcttgag
gacgacttggtggctctgcagaagaagttgaagggaactgaggatgagctggacaagtac
tctgaggctcttaaagatgcccaggagaagcttgagctggctgagaagaaagccaccgat
gctgaggcagatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgggctcaggagcgtctggccacagccctgcagaagctggaggaggctgagaaggctgca
gatgagagcgagagaggcatgaaggtcattgagaacagggccatgaaggatgaggagaag
atggagatccaggagatccagctgaaagaggccaaacacattgctgaggaggcagatcgc
aaatatgaggaggttgcacgtaaactggtcatcattgagagtgacctggaacgtacagag
gagcgcgctgagctctcagaaagcaaatgctctgaacttgaggaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccaggcagagaagtactcacagaaggaagacaag
tatgaggaggagatcaaggttctcaccgacaagctgaaggaggctgaaactcgtgctgag
ttcgctgagagatcagtagccaagcttgagaagaccattgatgacttggaagatgagttg
tactcccagaaactgaagtacaaagccatcagcgaggagctggaccatgccctcaacgac
atgacttccatataa
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