Gambusia affinis (western mosquitofish): 122835359
Help
Entry
122835359 CDS
T07758
Name
(RefSeq) unconventional myosin-Va-like
KO
K10357
myosin V
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122835359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122835359
04131 Membrane trafficking [BR:
gaf04131
]
122835359
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122835359
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122835359
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122835359
mRNA cycle factors
P-body specific factors
122835359
Membrane trafficking [BR:
gaf04131
]
Others
Actin-binding proteins
Myosins
122835359
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122835359
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122835359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_22
AAA_16
Myosin_N
Mce4_CUP1
Motif
Other DBs
NCBI-GeneID:
122835359
NCBI-ProteinID:
XP_043980324
LinkDB
All DBs
Position
LG08:6591753..6615276
Genome browser
AA seq
1821 aa
AA seq
DB search
MAAFELYSKNAHVWLPDAAEVWKSAELLKDYTPGDLTLSLQLEDGTVVEHNVDPQTKNLP
PLRNPNILVGENDLTTLSYLHEPAVLHNLKVRFIDSKLIYTYCGIVLVAINPYESLPIYE
ADIINAYSGQNMGDMDPHIFAVAEEAYKQMARDQRNQSIIVSGESGAGKTVSAKYAMRYF
ATVSSSSEETDVEKRVLASNPIMEAFGNAKTTRNDNSSRFGKYIEIEFNKDLCIVGANMR
TYLLEKSRVVFQAHGERNYHIFYQLCASSHLSEFKAFKLGCADDFCCTNQGQSPVINGVD
DAKEMCNTRRAFSLLGIGESDQVKIYQILSAILHLSNVDVKDQSSDTCSILPDNAHLMVF
CELMGVPCEEMAHWLCHRKLQTITETFVKPVSKENAVHGRDALAKHIYARLFGWIVKSIN
NALASTVKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
EIPWTLIDFCDNKPCINLIEAKLGILDLLDEECRMPKGSDDTWAQKLYNTHLKQNAYFDK
PRLSNEAFIIHHFADKVEYQCVGFLEKNKDTVNEEQINVLKKSKFDLLPKLFEDEEKIKA
PTSKISSNTGRPGKSQKEHKKTIGLQFRQSLYLLMDTLNATSPHYVRCIKPNDSKAPFTL
DPMRAVQQLRACGVLETIRISAAGFPSRWTYQEFFSRYRVLMKQKDVLPDRKQTCRNLLE
KLIKDQQKYQFGKNKIFFRSGQVAYLEKLRSDRLRSACVAIQKTIRCWLARKQYLRMRES
AIVIQKHVRARQARSYVKFLRQTKAAIVIQRNVRMWSKKRHFLQQRSAAVTVQRVWRGCL
ARKHYFKLLYEQKVVVIQRMVRGWSARQRFRRAMEAVVLLQSCVRRMRAKKELKKLKAEA
RTVEHFKNLNIGMENKIMQLQHKINEQHKENRELSERLSVLEKTHTTEREKQCREIENLR
SSEQEARAKAETVPSLLEQLSFIQEELENTRREKEHQEVQTKIYKEQTHQRIHELNMKNS
LLSSNLEELNEEFSIQAQQLAEIKTNLENTKQLEKDLTEERSRYQSLLSEHLQLEERHKD
LKEEMNVTIISNQSSHQRTDSNYSSNSSEFSQILSSTEDEDSAIQAEDEVETKVDLPILL
KLQKRVKELEGENRSLWKKLDKKEEAQQEKAKEVEMQTTFGRTELDVEKLKRQELESENK
KLKQNLNELRKSLTSENSDLAPPAAGSLPYNILLEQLSSSNEELELRKEEVLLLRSHMVR
QEALKHRDSVLGESVKLDLGEIHSLQDSDRSTNIHTLNEDGELWLAYEGLKETNRLLETQ
MQEQDCLHNEKYRKLNEEMNKLRAEKEHQQKLLAMSLLLPEDARIDASLKHEITRLTTEN
LERMEQQQKQDKTIRKLKKQLKLYIKKVEDLEASAHQTVGSSGTSMPVRPVHIARKEKEF
QGMLEFKEDDTGHLLKNLVVDLKPRGVAVSFTPGLPAFIIFMCLRYADNVNDDRRLSSLL
NSTISSIKGVIKRKGNDFEVVSFWLANTCRLMHCLKQYSGDEVFMVHNTAKQNEQCLANF
ELTEYHQLFGDLAIQIYRQIIKSMENILLPLIIPCMLEHEAEQGVLGSKPTGLRKRSPSF
PDEALTVEVLLQRLSFFHTTMSQHGMDSDIIKQVVKQQFYIISAVTLNNLLLRKDMCSWG
KGLQIRYNVWQLDEWLGEKELSDCGAKETLEPLIQAAQLLQIKKNTEADAKAICSMCSSL
TTAQIVKILTLYTPVIEFEERVSNTFITTIKNLLKDRAESSNLMMDAKKIFSVTFPFTPS
SVALETIQIPASLNLGFLTRV
NT seq
5466 nt
NT seq
+upstream
nt +downstream
nt
atggcagcttttgaactttactccaagaatgcccacgtttggctcccagatgcagcagaa
gtgtggaagtctgctgaacttctcaaagactacactcctggtgacctgactctgtctcta
caactggaggatggcacggttgtggagcacaatgttgacccccaaaccaaaaacctgcct
cctctcagaaaccccaacatcctggtgggagaaaatgacctcacaactctcagttacctc
catgagccagcagtgctacacaaccttaaagtgcgctttatcgactccaaactgatttac
acctactgtggaatcgtcctggttgccatcaatccctatgagagtctgcccatctatgaa
gctgatatcatcaacgcctacagtgggcaaaacatgggagacatggacccacatatcttt
gcagtagctgaggaagcatacaaacaaatggccagagatcaaagaaatcagtccataata
gtcagcggggagtctggtgcaggcaaaacagtttctgctaaatacgccatgcgttacttc
gccacagtcagcagctcatcggaggagaccgacgttgagaagagagttcttgcttctaat
ccaatcatggaggcctttgggaatgccaagacaacaagaaatgacaacagtagccggttt
gggaagtacattgagattgagtttaacaaggatctctgcatagttggggctaacatgagg
acctacttactggaaaagtctagagtagtgtttcaggctcacggagaaagaaactaccat
attttttaccagctatgtgcctcttcacatttgtctgagtttaaggccttcaaattaggc
tgtgcagatgacttctgctgcactaaccagggtcagagtccagtcatcaatggagtcgat
gatgcaaaagagatgtgcaacaccaggagggcgttttcactattaggaattggtgaaagt
gatcaagtgaaaatttaccagattctttcagctattctccatcttagcaacgtggatgta
aaagatcagtcatctgacacatgcagcatcctgccagataatgcccacctgatggtcttc
tgtgagctcatgggagttccttgtgaagaaatggcccactggttatgccataggaaactc
cagacgatcacggaaacctttgtgaagcctgtttccaaagaaaatgcggtccatggaagg
gatgcactggccaaacatatttatgccagactcttcggctggatcgtgaaaagtattaac
aatgcgctggcgtctactgtgaaacaacactcatttatcggtgtgctcgacatttatggg
tttgagacatttgatgtcaacagctttgagcagttttgcatcaactatgccaatgaaaag
cttcaacagcagttcaacctgcatgtcttcaagttggagcaagaggagtacatgaaggag
gagattccctggacgctgatcgacttctgtgacaacaagccgtgcattaatctcatcgag
gccaagctcggcatcctggaccttctggacgaagagtgcagaatgcccaaaggttctgac
gacacatgggctcagaaactgtacaacacccacctgaagcagaatgcttattttgataaa
cccaggttatcaaacgaagctttcatcattcaccactttgctgacaaggtggagtaccaa
tgtgtgggattcctggagaaaaataaggacactgtcaacgaggaacagattaatgtgctt
aaaaagagcaagtttgatttgctgccgaaactgtttgaggatgaagaaaaaataaaagcg
ccaactagcaagatttctagcaacactggaagacctgggaagtctcaaaaggaacataag
aaaactatcggactgcagtttcgacagtctctatacttgcttatggacactctaaatgca
acatcgcctcattatgtgcgctgcatcaaaccaaatgacagtaaagctccattcactctg
gacccaatgagagccgtgcagcagcttcgagcgtgtggcgtcctggaaacgatccgtatc
tctgcagcaggattcccatctagatggacctaccaggaatttttcagtcgttatcgggtc
ctgatgaagcaaaaggatgttctgcctgatagaaaacaaacctgcagaaacctcctggaa
aaacttatcaaggaccaacagaaataccagtttggcaaaaataagatcttcttcaggtct
ggccaggtggcttacctggagaagctgcgttcagacagactgcgttcagcttgtgtcgcc
atccagaagacgatccgctgctggctcgcccgcaaacagtatctgaggatgagagagtcc
gccatcgtgattcagaagcatgtacgggctcggcaagcacgcagttatgtcaagtttctg
cggcagaccaaagcagctattgttattcagcgcaatgtgcgaatgtggtctaaaaagaga
catttcctgcagcagcgctctgcagctgtcaccgttcagcgtgtttggaggggctgtttg
gctaggaagcattacttcaagttgctgtatgagcagaaggttgtggtgattcagaggatg
gtgagaggctggtcggccaggcagcgtttccgacgcgccatggaggccgtcgtcctgctg
cagagctgcgtgcgccgcatgagagccaagaaagaactgaagaagctgaaagcggaggcg
cgcacagtggagcacttcaagaacctcaacattgggatggagaacaagatcatgcagttg
cagcacaagataaacgagcaacacaaagaaaacagagagctctcagagaggctcagtgtt
ctggagaagacccacacgactgagagggagaaacagtgcagagagatagaaaacctgcgc
tcctcagagcaggaggccagagccaaagcagagacggttccctcgctgctggagcagttg
tccttcattcaggaggagctggaaaacacccgcagagagaaggagcaccaggaggtgcag
acaaagatctacaaagagcaaacgcatcagagaatccatgaactgaatatgaagaacagc
ttgttaagtagcaacttagaagagctaaacgaggaattctccatacaagctcagcagttg
gcagaaattaaaaccaacttggagaacaccaaacagctggagaaggatttgacagaagag
cgctctcgctaccaaagtctcctcagcgagcatctgcagctggaggaacggcacaaggac
ctcaaggaggagatgaacgtcaccataatttcaaaccagtctagtcaccagaggacagac
tccaactacagcagtaactcatctgagttttctcaaatcctgagctccactgaagatgaa
gacagcgccattcaagcagaggatgaggttgagactaaagtggacctgcccattcttcta
aagcttcagaaaagggtgaaggagctggagggagaaaatcgatctttatggaaaaagctg
gataaaaaagaggaggcccaacaagaaaaggcaaaagaagtggagatgcagacaactttt
ggcaggacagaactggacgtagaaaaattgaagcggcaagagctggagtcagagaacaag
aaactgaagcagaatctgaatgagctgcggaagtctctgaccagcgagaatagcgatttg
gcgccccctgctgctggttctttgccttacaacattctgctggaacaactcagttcttcc
aatgaggagctggaactgcgtaaagaggaggtgttgctccttcgttcacatatggttcgc
caagaagctcttaaacacagggattctgtacttggagaaagtgtgaaactggatcttggt
gaaatccactcattacaagattctgacaggtccactaatattcataccctgaatgaagat
ggagagctgtggcttgcttatgaaggcttgaaagagacaaataggcttctggagacccag
atgcaggagcaggactgtcttcacaatgagaagtacaggaagctgaatgaggagatgaac
aaactgagggctgaaaaggagcatcaacaaaagctgctggctatgagcctgcttttaccc
gaagatgcccgaatagacgcaagcctgaagcacgagataacacgactcaccactgagaat
ctggaacgaatggagcagcaacagaaacaagataaaacaatacgcaaattgaaaaaacaa
cttaagctatatataaaaaaagtggaagatttagaagcgagcgctcaccagacagttggc
tcttctgggacgagcatgccggtccgaccggtgcacatcgcacgcaaggagaaggagttc
cagggcatgttggagttcaaggaggacgacacgggtcatttgcttaagaacctggtcgta
gatctgaagcctcgtggcgtcgcagtcagcttcactccagggcttcctgccttcatcatc
ttcatgtgccttcgatatgcagacaatgtgaatgacgaccggagactcagctctctcctc
aattctacaatcagcagcatcaaaggcgtcatcaagagaaaaggaaatgattttgaagtg
gtgtcgttctggctggccaacacgtgccggttaatgcactgtctgaagcagtacagtgga
gatgaggtgtttatggtgcacaacactgctaagcagaatgagcaatgtctggctaatttt
gagctgacagagtaccatcagctttttggtgacctggccattcaaatctaccgtcagatc
atcaaaagcatggagaacatcctgctgcccctgataataccatgcatgctggagcatgag
gcagagcagggagttttaggctccaaaccaacaggcctgaggaagaggagccccagcttc
cccgatgaagctttgacagttgaagttctcctgcaacgcctcagcttcttccacaccacc
atgagtcaacacgggatggactctgacatcatcaaacaggtggtcaaacagcagttttac
atcatcagcgccgttactcttaacaatctgctgctgaggaaagacatgtgctcgtggggt
aaaggcctgcagatcaggtacaacgtttggcagctggatgagtggctgggagagaaggag
ctgagcgactgtggagcaaaggaaactctggagcctctcattcaggctgcacagctttta
caaatcaagaaaaacactgaagctgatgccaaagcaatctgtagcatgtgctcctccctc
accacagcacagattgttaaaatcctgacgttgtacactccagtgattgagtttgaagaa
agagtatcaaacacattcatcaccaccattaaaaaccttttgaaagacagagctgagtcg
tccaacttgatgatggacgccaagaaaatattctccgtcacattcccgttcacgccttct
tctgtggctctggagaccatccagatccccgcaagcctcaacctgggcttccttacacgt
gtctag
DBGET
integrated database retrieval system
