Gambusia affinis (western mosquitofish): 122835360
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Entry
122835360 CDS
T07758
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc isoform X1
KO
K10357
myosin V
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
122835360 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122835360 (myo5c)
04131 Membrane trafficking [BR:
gaf04131
]
122835360 (myo5c)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122835360 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
gaf04812
]
122835360 (myo5c)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
122835360 (myo5c)
mRNA cycle factors
P-body specific factors
122835360 (myo5c)
Membrane trafficking [BR:
gaf04131
]
Others
Actin-binding proteins
Myosins
122835360 (myo5c)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
122835360 (myo5c)
Cytoskeleton proteins [BR:
gaf04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
122835360 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
AAA_16
AAA_22
Myosin_N
NPHP3_N
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
122835360
NCBI-ProteinID:
XP_043980325
LinkDB
All DBs
Position
LG08:6618849..6644410
Genome browser
AA seq
1741 aa
AA seq
DB search
MALSELYTKYNRVWIPDEGQVWKSAEITKDFHSGDNVLELLLEDGTVHLHPVDPSKPKLP
PLRNPDILVGENDLTALSYLHEPAVLHNLKVRFVESRIIYTYCGIILVAVNPYKQLPVYG
DAIIHAYSGQNMGDMDPHIFAVAEEAYKQMARNHKNQSIIVSGESGAGKTVSARYAMRYF
AVVSKSGSQTRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYRIIGANMR
TYLLEKSRVVFQAENERNYHIFYQMCSCADSAEFKHLRLLGADEFRYTGMGGDITIDGVN
DKKDFEETRQTFSLLGLKDDFQSDVFKVLAAVLHLGNVEIRSSGDDKSSAALSDPHLAAF
CDLLCVSAAELVRWLCNRRIVLVAETVVKPVPKERAAAGRDALAKQIYAHLFDCIITRIN
TALQVPGKQHAFIGVLDIYGFETFDINSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKE
DIPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDQSWLQKLFNYLEANPLFEKP
RLSNEAFVIQHFADKVEYQCRGFLEKNRDALYEELVDTMRASKFSFLAHFFQEEEQQSRA
ASKGVKVKSARPSVKPANKQLRTSVGDKFRSSLSLLMETLNATTPHYVRCIKPNDEKLPF
EYDSGRVVQQLRACGVLETIRISAQSYPSRWTYIEFYSRYSILMSHVEADFNDKKQTCKN
VLQRLIQDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRGACVTIQKHVRGWSCRRKYLRI
REAAIILQQYIRGKRTIRKTVTAETLKQGWAAVVIQRHWRGYCMRQIYHVVQMASITIQA
FTRGWMARKRYKKMMEEQKALILQKYAKAWLARRRFQTMRRLVLNVQLSYRVQQLRKKNE
EQNKENRGLMERLTSLASSHSQTMEKLHSQEAQLEKLTNLKASLEEREKKAREEASMTIN
QLQEQLEELNTEKQNLEKKLEVSIKETKESFDQVKRNLLEEKENEVRLRKIAENNTEIQR
HDHEKELEILKEEIKRLKEDRVSLQRKVEDGAQVNSDLQEQVIQLTKHVKVIPELRRDLN
NLQNQKDTLDRKMKDQSEQTRAKTKEIVRQLLGGFVEEEKLLGFVPEDSEKIYEQDDSQE
AFESLQKATRLLETHQKEQRETYESQLEGLTLRVDHLQNENSKLQNLFQEKSNINEDIRQ
EVSRLSSENSVIPELKLQVSELHRQKQELETVVKEQSSELAEKNMEISNILHKKITEESS
QRRHFEEKARELEEIREELQVKIEELEEENEHLKRQQLMEGEVKRKLREETSQLTAENMD
LEELLDQKERWIKKLHSQIKCLEMSQKAKQTPALPKEYLGMLEYKREDEARLIQNIITDL
KPKGVVVNVIPTLPAFILFMCVRHADYLNDDNKLKSLMNGIIQGVKKVVVAHHKDFESLS
FWLSNTYRLLNCLKQYSGEEQFLKQSTPRQKKNCLQNFDLSEHRQILSDLAIQIYHQLIS
IMQKMLTPAIVPGMLEHESLQGISSMKPTGFRKRSSSLYNDLETYTISSILQELSMFYSA
MSQHGMEQSLTKQAVKQLFFLIGATTFNQIMLRKDMCSCRKGMQIRCNISYLEEWLKENE
LQSCGAIDTLRPLAQAAWLLQVNKSTNEDAKEIAEKCTELNPVQIVKILNSYTPIDDFEK
RVTSSFVRQVQSFLQEYEGATQLMLDTDYRFQVTFPFCPSSTALESLQVPSSLHLEFLTR
I
NT seq
5226 nt
NT seq
+upstream
nt +downstream
nt
atggctttatctgagctgtacacaaagtataacagagtgtggataccagatgaaggacaa
gtgtggaaatcggctgaaatcactaaagacttccactcaggcgataatgttcttgaatta
ctcctcgaagacggaactgttcacctccacccggttgacccctccaaacccaaactgccc
cctctcagaaacccagacatcttggtaggggagaacgacctcacggctctcagctacctg
cacgaacctgcggtcctgcacaacctcaaagtccgatttgtcgagtccagaatcatctat
acctactgtggtatcattctggtcgctgtaaatccatacaaacagcttcctgtctatgga
gacgcaatcattcatgcttattcaggccagaacatgggagacatggatcctcatatattt
gctgtggcggaggaagcgtacaaacagatggccaggaatcataaaaaccagtccatcatt
gtgagcggggaatccggagctggcaaaaccgtatcggcgcgttacgctatgaggtacttt
gctgttgtgagcaaatctggaagtcagactcgggttgaagacaaagtgttggcttccaat
ccgatcacagaggcaattggaaatgcaaaaaccacccgaaacgacaacagcagcaggttt
ggaaaatacacagagatcagctttgacaggaggtatcgcatcatcggagcgaacatgaga
acttacctcttagagaagtccagggtggtttttcaggcagaaaatgagcgtaattaccac
atattctaccagatgtgttcgtgtgcagactctgccgagttcaagcacctgcgactgttg
ggtgcagatgagttcaggtacaccggcatgggtggcgacataactatagatggtgtgaat
gacaaaaaggactttgaagaaactcgacagaccttctcccttctgggtttgaaagacgac
ttccagtcagacgtttttaaagttttagctgcagttttgcatttgggaaatgtggagatt
agaagctctggggacgacaagtcatcagctgctctgagcgatccacacctggcggcgttt
tgtgacttgctgtgtgtgagcgctgctgagctggtgcgatggctgtgtaatcgccggatc
gttctggtggctgaaacggtcgtgaagccggttcctaaagagcgagcggcggccggcaga
gacgctctggctaagcagatctacgcacatctgtttgactgcatcatcaccaggatcaac
acggcgctgcaggttcctggaaaacaacacgctttcatcggcgttctggacatctacgga
tttgaaacatttgacatcaacagctttgagcagttttgtatcaactatgcaaatgaaaag
ctccagcagcagtttaacttgcatgtgttcaaactggagcaggaggagtacatgaaggag
gacatcccttggactctgatagacttttatgataatcagcctgttattgacctgatcgaa
gcaaagatggggatcctcgacttgctcgatgaagaatgcttatttcctcaaggaacagac
cagagctggctgcagaagctgttcaactaccttgaagccaatcctttgtttgagaagccc
aggttatcaaatgaggcatttgtgattcaacactttgcagacaaggtggaatatcagtgt
cgaggttttcttgagaagaatcgagatgctctttatgaagagctggtggacacgatgaga
gccagtaagttttcctttctggcacatttcttccaagaggaggagcagcagagcagagcg
gccagtaaaggggttaaagttaaatccgccaggccttctgtgaaaccagccaataagcag
ctgaggacttcagtgggagataagtttcgcagctccttgtctttactgatggaaacgctg
aacgccaccacccctcactatgtgcgctgcataaagccgaacgatgaaaaactcccattt
gaatatgactcggggcgagtggtgcagcagctgcgggcctgcggagtgcttgaaactatt
cggatcagtgcgcagagctacccgtccaggtggacatacattgagttttacagccgatac
agcatcctgatgtcacacgtggaggcagatttcaacgacaagaaacaaacctgcaaaaat
gtcctgcagagattgattcaggactccaaccagtacaagtttggccgtacaaagatcttc
tttcgcgctggacaagtagcttatctggagaagcttcgtctggatcgactgagaggagcc
tgcgtgacgattcagaaacacgtccgtggatggagctgcaggaggaaatacctgaggata
cgagaggcggccatcatcctccagcagtacatccgagggaagaggacgatccgtaaaacg
gtgaccgctgagacactgaagcagggctgggctgctgtggtgatccagagacactggaga
ggttactgcatgagacagatctaccacgtcgtccaaatggcctccatcaccatccaagcc
ttcaccagaggatggatggccagaaaacgctacaagaagatgatggaggagcaaaaagct
ctgattctgcagaaatatgccaaagcatggctggccaggcggcgttttcaaaccatgcgc
cgccttgtgcttaatgtgcagctctcctaccgggtgcagcagctcaggaagaagaatgaa
gagcagaacaaagagaatcgaggattaatggagagactgacgagtctggccagcagtcat
tcccaaacgatggaaaaactccacagtcaggaggcgcaactggaaaaactaacaaacctg
aaggcatctctggaggaaagagaaaagaaagcaagagaagaggctagcatgacaattaat
cagcttcaagaacaattagaagaactaaacactgaaaagcagaacttggagaaaaagctt
gaagtttccatcaaagagaccaaagaaagttttgatcaagtaaaaagaaacctcctggaa
gagaaagagaatgaagtccggcttagaaaaattgcagaaaacaacactgagatccagaga
catgaccacgagaaagagctggaaatcctgaaggaggagataaagagactgaaagaggac
agagtgagtctgcagaggaaggttgaggatggggcgcaggtgaactctgacctgcaggaa
caggtcattcagctcaccaagcatgtgaaggtcatcccggagctgcgcagagatctgaac
aacctgcagaatcagaaggacaccctggaccgtaagatgaaggatcagtcggagcaaaca
agagctaaaacaaaggaaattgtaagacagctgcttggcggttttgttgaagaggaaaag
cttttggggtttgttccagaagactctgagaagatttatgaacaggatgattcgcaggaa
gcctttgagagtctgcaaaaagccaccaggttgctggaaacccaccagaaggagcagagg
gagacgtacgagtctcagctggagggcctgactctgagagtggaccaccttcagaacgag
aacagcaaactgcaaaatcttttccaggaaaaaagcaacatcaacgaggatatccgccag
gaagtatcgaggctgagcagtgagaactcggtcataccggagctgaagctgcaggtttca
gagctgcacagacagaaacaggagcttgagacggttgttaaagagcagagcagcgagtta
gcagaaaaaaatatggagatcagcaacattctccataagaagatcacagaagaaagctcc
cagcgcagacattttgaggagaaagccagagagctggaggagatcagagaggagctccaa
gtaaagatagaggagttggaggaggagaatgaacatttgaagagacagcagctgatggag
ggcgaagtgaagagaaaactgagagaggagacgtcgcagttaacagctgagaacatggac
ttagaggagctgcttgaccagaaagaacgctggattaagaagctccatagtcaaataaaa
tgccttgaaatgtcacagaaagcaaaacaaactcccgctcttcctaaagaatatcttggc
atgttggagtataagagggaggatgaagcaagactcattcaaaacatcataactgacctg
aagcccaaaggtgtggtggtcaatgtgattcctactctcccagccttcatcctcttcatg
tgcgtccgccatgccgactacctgaacgacgacaacaaactgaagtctctgatgaacggg
atcatccaaggggtcaaaaaggtcgtcgtggctcaccacaaagactttgagtcattgtcc
ttctggctctccaacacataccggctgctcaactgtctgaaacaatacagcggggaggaa
cagttcctgaagcagagtacgccgcgccagaagaagaactgcctgcagaacttcgatctg
tccgaacacagacagatcctcagcgacctggccatacaaatctaccatcagctcatctcc
atcatgcagaagatgctcacgcccgctattgttcctggtatgctggagcacgagagcttg
caggggatttctagcatgaaaccgactggcttcaggaagcgatccagcagcttgtataac
gacttggagacgtacaccatctcctccatcctgcaggaactctccatgttttattctgcc
atgagccaacacggcatggagcagagcctgaccaagcaggccgtcaaacagctcttcttt
ctgatcggagccaccaccttcaaccaaatcatgctccgcaaagacatgtgctcctgcagg
aaagggatgcagatcaggtgtaacatcagctacctggaggagtggctgaaggagaacgag
ctgcagagctgcggcgccatcgatacgttgaggcctctggctcaggccgcctggctgctg
caggtcaacaaatccaccaacgaagacgctaaagagatcgcagaaaagtgcaccgaactc
aaccctgttcagattgtcaagattttgaactcctacacacccatcgatgattttgagaaa
cgagtgacatcatcgtttgttcgccaagttcagtccttccttcaggaatacgagggcgcc
acgcagctgatgctggacacagattatcgcttccaggtgacgtttcctttctgtccgtct
tcgacagcgttggagtctctgcaggttcccagcagccttcatctggagttcctaaccagg
atctga
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integrated database retrieval system
