Gambusia affinis (western mosquitofish): 122835446
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Entry
122835446 CDS
T07758
Symbol
rag1
Name
(RefSeq) V(D)J recombination-activating protein 1
KO
K10628
V(D)J recombination-activating protein 1 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04068
FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04068 FoxO signaling pathway
122835446 (rag1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122835446 (rag1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122835446 (rag1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122835446 (rag1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAG1
RAG1_imp_bd
zf-C3HC4_2
zf-C3HC4
TRAF3_RING
zf-RING_10
U-box
zf-C3HC4_4
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
122835446
NCBI-ProteinID:
XP_043980455
LinkDB
All DBs
Position
LG08:14063317..14067424
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AA seq
1069 aa
AA seq
DB search
MAAENPETDGPRSFMPAELQHPHSKYSQWKFKLFRVKSMEKAPLPSETQTEIGASLGISP
PNAPNIEADHGGGLASVMKLCLGGKSKENVEGAGKRVDMKLQEMDTHMNHLRCLCRICGM
ILRKVKGPVHDVHGDLDDASKCVLRKMGCKFTSWPDILLKVFKVDVTEDAESIHPLSFCH
RCWLAAIRGGGVCSFTRTKVPEWKPHTSHCYLCSPKKSSFQRTGRKRRKVVPKVQSLAKR
ARWDHSDTIAVGEKRALRPFGDCHNPVLRAWKKNAIQREQWVKNITHCQNDHLNTKLIAE
KLPADFIISFTCLVCDHLLCDPVQSPCGHLFCRSCIIKFTHVLGPHCPSCNVSCAPDDLI
PPAKTFLSTLYSLPLLCPCEGCGEHVQLGLFKAHCLNHELEPGTSKHSSQFQSYLLTNKG
GRPRQHLLSLTRRAQKHRLKDLKSQVKVFADKEEGGDLKSVCLTLFLLALRSGNEHRQAD
ELEAMMQGRGFGLSPAVCLAIRVNTFLSCSQYHKMYRTVKATSGRQIFQPLHTLRAAEKE
LLPGFHQFEWQPALKNVSTSCNVGIINGLSGWTSSLDDSPADTITRRFRYDVALVGALKD
LEEDIMEGLRDTGMEDSACTLGFRVMIKECCDGMGDVSEKHGGGPAVPEKAVRFSFTVMS
VSIQAEDEQEEVTIFTEPKPNSELSCKPLCLMFVDESDHETLTAVLGPIVAERNAMKESR
LILSMGGMPRSFRFHFRGTGYDEKMVREMEGLEASGSTYICTLCDSSRAEAAQNMVLHSI
TRSHDENLERYEIWRTNPFSESVDELRDRVKGVSAKPFLETQPTLDALHCDIGNATEFYK
IFQDEIGEVFKNPNPSREQRRSWRAALDKQLRKKMKLKPVMRMNGNYARRLMTMEATEVV
CELVPSEERREVLRELMRLYLQMKPVWRATCPAKECPDQLCRYSFNSQRFADLLSATFKY
RYNGKITNYLHKTLAHVPEIIERDGSIGAWASEGNESANKLFRRFRKMNARQSKAFELED
VLKHHWLYTSKYLQKFMEAHKDSAKAFQATIDPEENQDDEELTPEITGF
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagagaacccagagacagatggtcccagatccttcatgcctgctgagctccag
catccccactctaagtattctcagtggaagtttaagctgtttagggtgaaatctatggag
aaggcacctctgccgagtgagacacagaccgagataggagcttcattagggatctcacct
cctaacgctccaaatatagaagcagatcatggagggggactagcgagtgttatgaaattg
tgccttggggggaaaagcaaagaaaatgtggaaggcgctggtaagagagttgatatgaaa
ctgcaggaaatggacacccacatgaaccatctcaggtgcttgtgccgcatctgtggaatg
atcctgaggaaggtcaaaggacctgtgcatgatgtccatggtgatctggatgacgcaagc
aagtgtgtgctccgcaaaatgggttgcaagtttacgagctggccagacatacttctgaaa
gtattcaaggtggatgtgacagaggacgcagaatccatccaccctctttccttctgccat
cgctgctggcttgccgccatacgaggaggaggggtctgcagcttcactagaacaaaagtc
ccagagtggaagccccacacctcccactgctacctgtgctcccccaaaaagtcatcattt
caaaggactggaagaaagaggaggaaggttgttcctaaagtccagagtttggccaaaagg
gccaggtgggaccacagtgacaccattgctgttggtgagaagagagcccttagacccttt
ggagactgccacaatcctgtgctgagggcctggaaaaaaaatgctatccagagagaacag
tgggtaaagaatatcacgcactgccaaaatgatcaccttaacaccaaactgattgcagaa
aagctacctgcggattttatcatttctttcacctgcctggtgtgtgaccacctgctctgt
gatccagttcagtccccctgtgggcatctcttctgccgcagctgcattataaaatttacc
cacgttctgggaccccactgcccttcatgcaacgtttcttgtgctcctgatgatctcatc
cctcctgccaaaaccttcttatcaactctctactctctgcctctgctgtgtccctgtgaa
ggttgtggtgagcacgtgcagttaggcttgttcaaggcccactgtctaaaccatgagttg
gagccgggtacaagcaaacactcatctcagtttcaaagctacctgctaaccaataaggga
gggagaccccgccagcacttgctctccttaacccgtcgtgcccagaagcaccgactgaag
gatctgaagagccaggtgaaggtgtttgcagacaaagaagaaggcggtgatctgaagtct
gtgtgcttgacactgtttctgctcgctctgagatctggaaatgaacaccggcaggcagac
gagctggaggccatgatgcaaggcagaggctttggattgagtcctgctgtgtgcctggcc
attcgtgtcaacacattcctgagctgcagccagtatcataagatgtatcgaacagtcaaa
gctacaagtggccgccaaatctttcagcccttgcacaccctcagagctgcagaaaaggaa
cttcttcctggctttcaccagtttgaatggcagccagctctcaaaaacgtgtccacatct
tgtaacgttggcatcataaatgggctgtcaggatggacatcttcgttagatgactcccca
gctgacaccatcacccggcgctttcgctatgatgtggcgcttgttggagcactgaaggac
cttgaggaggacatcatggaaggtctgagagacactgggatggaagatagcgcttgcacc
ttgggctttagagtcatgatcaaggagtgctgtgatggcatgggtgatgttagcgaaaag
catggtggaggaccagctgttcctgagaaggctgttcgcttctctttcactgttatgtct
gtctctatccaggctgaagatgaacaggaggaggtcacaattttcacagagccaaagccc
aactctgaactatcctgtaagcccctttgccttatgtttgtggatgagtctgaccacgag
actctcactgctgttttggggcctatagttgcagagcgaaatgcgatgaaagagagcagg
ctcattctatctatgggcggcatgccacgctcctttcgcttccacttcaggggcacaggg
tatgatgaaaagatggtgcgtgaaatggagggcctggaagcttcgggatctacatatatc
tgtactttgtgtgactccagtcgagcagaggctgctcaaaacatggtgttacactccatc
acccgcagccatgatgagaatctggaacgttatgaaatatggagaaccaaccccttttct
gagtctgtagatgagctacgagacagagtcaaaggagtctcagccaagccctttctggag
acccagcccacgctagatgcattgcactgcgacataggcaatgccactgaattctacaaa
atcttccaggatgaaattggagaagtgtttaagaaccccaaccccagcagagagcaacgg
cgcagctggagggcagccttggataaacagctgaggaagaagatgaagcttaaaccagtg
atgaggatgaatgggaactatgcccgaaggttaatgaccatggaggctaccgaggtggtt
tgtgaactggtgccctcagaggagaggagagaggtcctgagggaactcatgaggctctac
ctccaaatgaaacctgtgtggcgtgccacctgtccagccaaggagtgccctgaccagctg
tgccgctacagttttaactcccagcgctttgccgacctgctctccgctaccttcaagtac
aggtataacggaaaaataaccaattacctgcacaagaccctggcccatgtgcctgaaatt
atagagagagatggatctattggagcctgggccagcgaggggaacgagtcggcaaacaaa
ctgttcaggcgtttcaggaagatgaatgcacgtcagtccaaggcctttgaactggaagac
gtgctaaaacaccactggctctacacttctaagtacttgcagaagtttatggaggctcac
aaagactctgctaaagctttccaggcaacaatagatccagaagagaaccaggatgatgaa
gagttgactccagaaataactgggttttga
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