Gambusia affinis (western mosquitofish): 122835465
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Entry
122835465 CDS
T07758
Symbol
cnot2
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122835465 (cnot2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122835465 (cnot2)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
122835465 (cnot2)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
122835465 (cnot2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
122835465
NCBI-ProteinID:
XP_043980477
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Position
LG08:16201146..16211484
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AA seq
518 aa
AA seq
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MFGSRKPFPDFGDGVDNDLADDMYYNQSMFHRSDKDMLSSPSPSSSNQLSQLGVSLYGPQ
SAIGFPVRNMGNSTPQLNRNLTQGTQLASHITPTTGVPSMSLHTPSSPSRGTISRNILNH
SQVGQGIGLTGRTSSMGSSGLGSPNRSSPSIICMPKQQPARQPCTINSMSGFGMNRNQAF
GMNNSLSSNIFNGTDGSDNIMGLDLSDFPALADRSRREGTGNPTPVLNPLAGRAPYEVGM
VTKPSTDQTQDFSIHNEDFPALPGPNYKDPTLNNDDSKTNLNSTSKSTSSTDGPKFPGDK
TTSSQNNNQKKGIQVLPDGRVTNIPSGMVTDQFGMVGLLTFIRAAETDPGMVHLALGSDL
TTLGLNLNSPENLYPKFASPWASAPCRPQDIDFHVPSEYLTNIHIRDKLAAIKLARYGED
LLFYLYYMNGGDLLQILAAVELFNRDWRYHKEERVWITRAPGMEPTLKTNTYERGTYYFF
DCLNWRKVAKEFHLEYDKLEERPHVPTTFNYNPAQQAF
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctagaaaaccctttccagatttcggcgacggagtcgacaacgacttggct
gatgacatgtactacaaccagtccatgttccacaggtcggacaaagatatgttgtcctcg
ccttcgccatcgtcgtccaatcagttgtcgcagctcggtgtgagtttgtacggcccacaa
agtgcaatcggcttcccagtaaggaacatgggaaacagtacgcctcagttaaaccgaaat
ctaacacaagggacgcagctagcaagtcacatcaccccaacaacgggtgtcccctccatg
tccctacacaccccttcctcgccaagcaggggaacaatatctagaaacatcctaaaccac
tctcaggttggtcagggcattgggttaaccggcaggaccagcagcatgggcagctcaggg
ctgggaagtccaaaccgcagctcacccagcatcatctgtatgcccaaacagcagccagcg
cgccagccctgcaccatcaacagcatgtcaggatttggtatgaaccgcaatcaagctttt
gggatgaacaattcattatcgagcaacatcttcaatggcacagatgggagtgacaatata
atgggcctggatctgtcagacttccccgcattagcagaccggagtcggagagaagggact
ggaaatccaacaccggtgctgaacccgctggctggacgcgctccttatgaagttggcatg
gtaacaaagccatcgactgatcagacacaagacttctccatacataacgaggacttcccc
gcactgcctgggccaaattacaaagaccccacactcaacaacgatgacagcaaaactaac
ttgaactccacaagcaagagcacatccagcacagatggtccgaagtttcctggagacaag
acgacctcgtcacagaacaacaaccagaagaaagggatccaggtgttgcccgatggtcgg
gtgacaaacattccctcaggaatggtaacggaccaattcggcatggtgggcctgctgacg
tttatccgggccgcagagaccgatccggggatggtgcatctggcgctgggaagtgacctc
acaacactgggactcaacttaaattcaccagaaaacttgtatccaaagttcgcctctccc
tgggcgtctgcaccatgtcgacctcaagacatcgatttccatgttccgtcggagtattta
accaacatccatataagggacaagttagccgctattaagttggctcgatacggtgaagac
ctgctgttctacctgtactacatgaacggaggggacctgcttcagatcctggcagctgtg
gagctcttcaaccgggattggagataccacaaagaggagcgggtttggataacaagagcg
cccggcatggagcccaccctcaagaccaacacctatgagagaggcacctactacttcttc
gactgtcttaactggaggaaagtagccaaggaatttcatctggaatatgacaagctggag
gagaggccccacgtgccgacaacgttcaactacaatccagcccagcaggccttctaa
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