Gambusia affinis (western mosquitofish): 122835475
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Entry
122835475 CDS
T07758
Symbol
polr3b
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03020
RNA polymerase
gaf04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122835475 (polr3b)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
122835475 (polr3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122835475 (polr3b)
Enzymes [BR:
gaf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
122835475 (polr3b)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
122835475 (polr3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_2
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
122835475
NCBI-ProteinID:
XP_043980498
LinkDB
All DBs
Position
LG08:complement(13121137..13144358)
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AA seq
1132 aa
AA seq
DB search
MELLGGEFGDMTPQELAAPVNTVAEKWKLLPAFLKVKGLVKQHIDSFNYFINVEIKKIMK
ANEKITSDADPMWYLKYLNIYVGMPDVEESFNVTRPVSPHECRLRDMTYSAPITVDIEYT
RGSQRIIRNALPIGRMPIMLRSSNCVLTGKTPMEFSKLNECPLDPGGYFIVKGQEKVILI
QEQLSKNRIIVEQDRKGAVGASVTSSTHEKKSRTNMIVKQGRFYLRHNTLSEDAPIAIIF
KGMGVESDQEIVQMIGTEEHVMASFAPSLEECQKAQIFTQTQALRFLGNKVRRQRMWGGP
KKTKMEEARELLASLILTHVPVKEFNFRAKCIYLAVMVRRVILAQGDNKVDDRDYYGNKR
LELAGQLLSLLFEDLFKKFNAELKKIADQIIPKQRAAQFDVVKHMRQDQITNGMVNAIST
GNWSLKRFKMDRQGVTQVLSRLSYISALGMMTRISSQFEKTRKVSGPRSLQPSQWGMLCP
SDTPEGEACGLVKNLALMTHITTDMEDGPIIKLAFNLGVEDVNLLCGEELSYPSVFLVFL
NGNILGVIRDHRKLVNTFRLMRRAGFINEFVSISTNMTDRCVYISSDGGRLCRPYIIVKK
GQPMVNNKHIEDLSQGYRTFEDFLHEGLVEYLDVNEENDCQISLYEHMISKETTHLEIEP
FTLLGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLAYPQRPMVK
TKTIELIDFEKLPAGQNATVAVMSYSGYDIEDALVLNKASLDRGFGRCLVYKNTKCILRR
YTNQTFDKVMGPMLDAATRKPIWRHNILDADGICSPGERVENKQVLVNKSMPTVTQTPLE
GSAQPGQPQYRDVPISYKGSTDSYIEKVMISSNAEDAFLIKILLRQTRRPEIGDKFSSRH
GQKGVCGLIVPQEDMPFCDTGICPDIIMNPHGYPSRMTVGKLIELLAGKAGVLDGRFHYG
TAFGGSKVKDVCEDLIRYGYNYQGKDYVTSGITGEPLEAYIYFGPVYYQKLKHMVLDKMH
ARARGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCG
QCGLLGYSGWCHYCKSSCHVSSLRIPYACKLLFQELQSMNIIPRLKLSRYNE
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgggaggagagtttggagacatgactcctcaggagctggcggctcctgtc
aacaccgtggcggaaaagtggaaattgctaccagccttcctgaaggtgaaaggtttggtg
aagcaacacatcgactcgttcaactacttcatcaatgttgagattaagaaaatcatgaaa
gcgaatgagaaaataaccagcgatgctgatccaatgtggtacctgaagtacctgaacatc
tacgttgggatgcctgacgtcgaggagagcttcaacgtaaccagaccggtttctcctcat
gagtgtcgcctcagagacatgacctactcggcaccgatcacggtggacatcgagtacacc
cgtggcagccagaggatcatccgaaacgctctgccgattggaaggatgccaatcatgctg
cgaagctccaactgcgttctcacgggaaagacgcctatggagttctccaagctcaacgag
tgtcctttggatccaggaggttatttcatcgtaaaaggccaggagaaagtcatcttgatc
caggagcagctgtccaagaatcggatcattgtggagcaggacaggaagggagcagttgga
gcctcagtcaccagctccactcatgagaaaaaaagcagaaccaacatgattgtgaagcaa
ggccgcttctacctgagacacaacacgctgtctgaagacgctcctatcgccataatattc
aagggcatgggtgtagagagtgaccaggagatcgtccagatgatcggcacggaggagcac
gtcatggccagcttcgctccgagcctggaggagtgtcagaaagctcagatcttcacacag
actcaggctctgaggtttcttgggaataaagtccggcggcagcggatgtggggaggcccc
aagaagaccaagatggaggaggccagagagctgctcgcctctctcatcctcactcatgtt
cctgtgaaagagtttaactttcgggctaaatgcatctacctggctgtgatggtccggagg
gtgatcctggctcaaggtgacaacaaagtggacgacagagattattatgggaacaagcgt
ctggagttggctggacagctgctgtctcttctgtttgaggatctgtttaaaaagtttaat
gccgaactgaagaagatcgccgaccagatcatccccaagcagcgagccgctcagtttgac
gtggtcaaacacatgaggcaggatcagatcaccaacggcatggtcaacgccatctccaca
gggaactggtctctgaagagattcaagatggaccgtcagggtgtcacccaggttctgtcc
cgtctctcctacatttcggctctggggatgatgaccaggatctcctcccagttcgagaag
accaggaaggtcagcgggcctcgttccctgcagccgtcccagtggggaatgctgtgtccg
tccgacactcctgagggagaggcctgcggtctggtcaagaacctggctctgatgacacac
atcaccacagacatggaggacgggcccatcatcaaactggccttcaacctcggcgtggag
gacgtcaacctgctgtgcggagaggagctctcctacccgagcgtcttcctcgttttcctc
aacggtaacattctgggcgtcatcagagaccaccggaaactggtcaacaccttcagactg
atgcggagggcgggtttcatcaatgaattcgtgtccatctccaccaacatgaccgaccgc
tgcgtctacatctcgtctgacggaggacgactctgcaggccgtacatcattgtgaagaag
ggacagccaatggtaaataacaaacacattgaggatctgtctcagggctacagaacgttt
gaggactttctgcacgaaggccttgtggagtacctggatgtgaacgaggagaacgactgt
cagatctctctttatgagcacatgatcagcaaagagacgacacacttggagatcgagccc
ttcacgttgctgggagtgtgtgcgggcctcattccctacccccaccacaaccagtcgccc
aggaacacgtaccagtgcgctatgggcaagcaggccatgggaactattggctacaaccag
aggaaccgcatcgatactctgatgtacctgctggcctatcctcagaggccaatggtcaaa
accaaaaccattgagctgattgactttgagaagctgccggcgggtcagaacgccaccgtg
gcggtgatgagttacagcggctacgatatcgaggacgctctggtcctcaacaaagcctca
ctggacagaggattcggtcgctgccttgtctacaaaaacacaaagtgcattctgaggcgt
tacaccaaccagaccttcgacaaggtgatggggcccatgctggacgctgctacccgtaaa
ccaatatggcggcacaacatcctggacgctgacggcatctgttcccccggtgagagggtg
gagaacaagcaggtgctggtgaacaaatcaatgccaaccgtcactcagacgccactggag
ggcagcgcccagccaggtcagccacagtaccgggacgttcccatcagctataagggctca
acagactcgtacatcgagaaggtcatgatctcgtccaacgctgaagacgccttcctcatc
aagatcctcctgaggcagacgaggagaccagagataggagataaattcagcagtcgacac
gggcagaaaggtgtgtgtggcctcatcgtccctcaggaggacatgccgttctgtgacact
gggatctgtccagatatcatcatgaatccccacggatatccgtccagaatgacggttgga
aagttgatagagctgcttgctgggaaggcgggggtcctggacggacggtttcactacggg
acggcctttggaggcagcaaagtgaaggatgtgtgcgaggatctgatccgatacggatac
aactaccagggcaaggactacgtcacctcaggaatcaccggagaacctctggaggcgtac
atctacttcggaccggtctactaccagaagctgaaacacatggttctggacaagatgcat
gccagagcccgagggcccagagcggttctcaccaggcagccaaccgagggtcgctccagg
gacggaggtctgcgattgggagagatggagcgtgattgcttgattggctacggagcgagc
atgttgctgctggagcgtctgatgatctccagcgacgccttcgaggtggacgtgtgcgga
cagtgtggcctgctgggatactcaggctggtgtcactactgtaagtcttcctgccacgtt
tcgtcgctgaggatcccgtacgcctgcaagctgctgttccaggagctgcagtccatgaac
atcatccctcgcctcaagctgtcgcgctacaacgagtga
DBGET
integrated database retrieval system
