Gambusia affinis (western mosquitofish): 122835641
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Entry
122835641 CDS
T07758
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3 isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03020
RNA polymerase
gaf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
122835641 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
122835641 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122835641 (polr2c)
03400 DNA repair and recombination proteins [BR:
gaf03400
]
122835641 (polr2c)
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
122835641 (polr2c)
DNA repair and recombination proteins [BR:
gaf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
122835641 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
122835641
NCBI-ProteinID:
XP_043980795
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All DBs
Position
LG08:18913357..18917720
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AA seq
275 aa
AA seq
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MPYANQPTVKITELTDENVKFVIENTDLAVANSLRRVFMSEVPTIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVYPRPEEWPKSEYSEIEEDEVQAPYDPNGKPERFYFNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgctaaccagccgactgttaaaataacagaattgacagacgaaaatgtcaaa
tttgtcatcgaaaacacggatttggcggttgcaaactctctccgtcgtgtcttcatgtca
gaagttcccacaatagccatcgactggatccaaatcgatgctaattcatcagtgctgcac
gatgagttcatcgcgcacagagtcggtctcattcccctcaccagcgacgacatagtggat
aaaatgcagtattcaagggactgcacttgtgatgacttctgtcccgaatgctccgtggaa
ctgaccttggacgtccgctgcaccgaggaccaaacgcgtcacgtcacctctcgcgatctg
ctctccaacaaccccagagtgatccctgtcacttccagaagtagagacaatgacccgaac
gactacgtcgagcaggatgacatcttgctggtgaagctccgtaaaggtcaggagcttcgg
ctgagagcgtacgccaagaagggcttcggtaaagagcacgccaagtggaacccgacggcg
ggggtttcattcgagtatgacccggacaacgccctgaggcacacagtctatccacgaccc
gaggaatggccaaagagtgaatactcagagattgaggaagatgaagttcaggcgccctat
gaccccaatggaaagccggaaagattttatttcaacgtggagtcctgcggttcgctccgg
ccggagaccatcgtcatgtcggcgttggcggttctgaagaagaaactcagcgacctgcag
acccagctgagccatgagatccagagtgacgtcctcaccattaactga
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