Gambusia affinis (western mosquitofish): 122835672
Help
Entry
122835672 CDS
T07758
Name
(RefSeq) transcriptional repressor CTCF-like isoform X1
KO
K23195
transcriptional repressor CTCF
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122835672
03036 Chromosome and associated proteins [BR:
gaf03036
]
122835672
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
122835672
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
122835672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_16
zf-H2C2_5
zf-C2H2_jaz
zf-C2H2_7th_ZNF462
zf-C2H2_REST
Zf-C2H2_ZNF451_C
zf-met
Zf-C2H2_ZNF451
zf-C2HE
zf-C2H2_6
zf-C2H2_15
zf-C2H2_ZN142
zf-WIZ
Motif
Other DBs
NCBI-GeneID:
122835672
NCBI-ProteinID:
XP_043980838
LinkDB
All DBs
Position
LG08:complement(28303408..28315257)
Genome browser
AA seq
916 aa
AA seq
DB search
MRFNVAPLLANQGAASVPTPPPSGRTGALSAQLPFCGRSYSAKAGEELKLTAKKRVVYSE
LVKLFSTASLLPGGTTGRRNTQKQLLLDMDGSSAEAVDAPPKDFPSIQAVHSQEALVVDL
LQQAAEAGGVVQGPAAVILEQGHVEGMVAAAQSQQALLEAGVGVSVQRGEVEMMVMDSLD
PTLMQMKTEVIDAAVGGSSATVGVVAGATHQAAVATVDQTQIITLQVVNMEEQAALGLGE
LQLVQVPVSAAAVDALQQGTFVDTTAMPKTGDPVICHTLPLPEGFQVVKVGANGEVETVE
QEEGVEAHSEEDEDDAEVGQQLLEEGEEAAQPANHHQNWAKDPDYQPPSGGIKKAKKGKK
SRLRYAEGDKDMDVSVYDFEEEQQEGLLSEVNAEKVVGNMKPPKPTKIKKKGVKKTFQCE
LCSYTCPRRSNLDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDM
AFVTSGELVRHRRYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCSYASR
DTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK
SDLGVHLRKQHSFIETGKKCRYCDAVFHERYALIQHQKSHKNEKRFKCDLCDYCCRQERH
MVMHRRTHTGEKPFACSQCEKTFRQKQLLDMHFKRYHDPNFVPTAFVCPKCSKTFTRRNT
MARHSENCNGEVEEFENGAATPKKGRRGRKRKMRTRRDEDDSEDDIPEQDEGEEEGEEEA
ALLQEEEDLEGMELDQAPAVIPVVAPDEPPVKRKRGRPPKNPKPQTPSRAGTASSVAATI
QVEDELTGAVENIIVKKEGGDAATSVKQGADLAVEGGVGGGEGVEEVELTVNQETTAATA
ANGDLTPEMILSMMDR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttaacgttgcgcccctcctggccaatcagggtgctgcatcagttccgacacca
ccccccagcggccgcacaggcgcactgagcgctcaactgccattttgtggcagaagctac
tctgccaaagcgggtgaggaattaaaactaactgcgaagaagcgtgtagtttattccgag
ctggttaaactttttagcactgcctctctgcttccaggcgggaccacagggaggagaaac
actcagaaacagttgttgctagacatggatggcagctcagcagaagctgtggacgctccc
cctaaagacttcccatccatccaggccgtccacagccaggaggccctggtggtggatctc
ctccagcaggcggcggaggccgggggcgtggtgcagggaccggcggctgtcatactggag
caaggtcatgtggaaggaatggtagctgctgcccaatcccagcaggcgctgctggaagct
ggggtcggggtgagcgtgcaacgtggagaagtagaaatgatggtcatggattccctggat
cccaccctgatgcagatgaagactgaggtgatcgatgctgcagtcgggggatcatcagcc
acagttggcgtggttgcaggagcaactcatcaggctgccgtggcaacagtggaccagact
cagatcatcaccctgcaggtggtcaacatggaggagcaggcagctctgggtctgggggag
ctgcagttggttcaggtgccggtttctgccgctgccgtggacgctctgcagcaaggcaca
tttgtggacaccacagcaatgccgaagaccggagaccccgtcatctgtcacacacttcct
ctgcctgagggctttcaggtggtcaaagttggtgctaatggggaggtggagactgtggag
caagaagagggagtagaggcacactctgaagaggatgaggacgatgcagaggtgggacag
cagctgctggaggaaggagaggaggctgcccagcctgcaaaccatcaccaaaactgggct
aaagacccagactatcagcctccatctggggggatcaaaaaggccaagaaggggaagaag
agccgcctgcgctacgctgaaggagacaaggacatggatgtcagcgtgtacgactttgaa
gaggagcaacaggagggccttctgtctgaggtcaatgcagagaaagtagtcggcaacatg
aagcctccaaagcccacaaagatcaagaagaaaggggtgaagaagactttccagtgcgag
ctgtgcagctacacatgtcctcgtcgctccaatcttgaccggcacatgaagagccacact
gatgagagaccccacaaatgtcacctctgtggaagagccttcaggacggtgacgctgctg
agaaaccatctcaacacacatacagggactcgaccacacaagtgcacagactgcgacatg
gccttcgtgaccagtggagaactggtgcgtcatcgtcgctacaaacacacacacgagaag
ccgttcaagtgctccatgtgtgactacgccagtgtggaggtgagcaaactgaagcggcac
attcgctcccatactggggaacgtcccttccagtgcagtctgtgcagctacgccagcaga
gacacatacaagctgaagagacacatgaggacacactcaggagaaaaaccttatgagtgc
tacatctgccacgcccgattcacccagagcggaaccatgaagatgcacatcctgcagaaa
cacacagagaatgtggccaagttccactgtccacactgtgacactgtcatcgcacgcaag
agtgacctgggggttcatctgcggaagcagcactcgtttattgagaccgggaagaagtgt
cgctattgtgatgctgttttccatgagcgctacgctctaatccagcatcagaagtcccac
aagaatgagaagaggttcaagtgtgacctgtgtgattactgctgccgtcaggagcgccat
atggttatgcaccggcggacccacacaggagagaagccgtttgcgtgcagccagtgtgaa
aagaccttcagacagaagcagctgctggacatgcacttcaaacgctaccacgaccccaac
tttgttcccacagcttttgtctgccccaagtgtagcaagacgttcacccgcaggaacacc
atggctcgtcattccgagaactgtaacggggaggtggaggagtttgagaacggagctgcc
actcccaagaaaggcaggagaggaaggaagaggaagatgaggaccaggagggatgaggat
gatagcgaagacgacatccccgaacaggacgagggtgaagaggagggtgaggaagaagca
gcactgctgcaggaggaggaggacctggagggcatggagctggatcaggctcctgctgtt
atcccagttgtggccccagatgagcctccagtgaagaggaaacgaggtcgaccccccaag
aaccccaaaccccaaacccccagcagagctgggactgcttcttctgtggctgccacgatt
caggtggaggatgagctgacaggtgcagtagagaacatcatagtgaagaaggaggggggc
gacgcagcgacttctgtgaagcagggagcggacctggcagtggaaggaggggtgggtggt
ggtgagggggtggaggaggtggagctgactgtgaaccaggaaacaacagcagctactgct
gctaatggagatctcacgccagagatgatcctcagcatgatggaccgctga
DBGET
integrated database retrieval system
