Gambusia affinis (western mosquitofish): 122835728
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Entry
122835728 CDS
T07758
Symbol
smc1b
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04110
Cell cycle
gaf04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
122835728 (smc1b)
04114 Oocyte meiosis
122835728 (smc1b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
gaf03036
]
122835728 (smc1b)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
122835728 (smc1b)
Meiosis-specific proteins
Cohesin complex and associated proteins
122835728 (smc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_23
AAA_29
Motif
Other DBs
NCBI-GeneID:
122835728
NCBI-ProteinID:
XP_043980946
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Position
LG08:complement(26252415..26268816)
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AA seq
1250 aa
AA seq
DB search
MGYLKQIDIENFKSWRGKQVIGPFMRFNCIIGTNGSGKSNVMDALSFAIGERVASLRVKH
LRDLVHGAHIGKPVSDTARVALRFLNDDDKETVFSRTITGDSSAYHINGSHVSHAKYIEE
LEKIGIVTKAQNCVVFQGAVEAIALKDPKERTKMLECICQSKQYAAEYKTKKEALMKAKE
DTQFHFNKKKSATVERKQVSLEKVEAQKYQDLVDDLNQKRLQLSLFELYHNEKGIDAISD
TLRGRKEVAAEMNRELGAAEQSVKAHKKEHGRLTREVQHMEKEIRGQEQVLTQSRSQYIK
AKVNSSHHVKKADEISEAVKKKRRALAAKEQQLEEGRQEVAELQRAWRMYEKQTQEGVAR
GRDISLDEDQLRQYKALKELAQMQGAVLCQQADKMHWEVRADSEKVLFDQRRKKEIEVAI
RNNQTHLEEFMSRAEKLEEYTQKCKKSLEDLDERQQSLTAELQHVTQRGEEVKQELDQVM
EELRSARLDSHESKRQQQRRELLEKLRRLYPQTVFGRLSDLCSPVHKKYQLAVTKVFGRY
MNAIVVSSEKVARDCISFLKEQRAEPETFLPVDYLLVNPLNERLREIPGVKMVVDVVQVN
AGSAQLGKVVQYVCGNALVCETMREARSVAFDRPDRVRTVTLDGTLFKTSGVISGGSSDL
RTKARCWEEKDMRRLKEHRDRLMNEMRDLSRLKRKEANLNQMFAESQGAQTRLKYTRTDL
EILRSKTIPKCQAEISRLESELSNLECQLEMQQEDLEAKDAEMKRIREQIDQIDDMVFAD
FCTKIGVETIREFEQEHLKQKAELDKKRLEFEGQQARLNAQLEYEAKQLAQERKKLGKME
DTIRQEEQATVESREVENNLLETVEEYQNKLLEMKNELLLKKNQVASVKAELNQKTQKLQ
EKNKELTKLQREVMSAETALEQKRMARHNMLLACKIQDLRITMLSGSLDEISEVQLMTDS
ESTTATMDIYEREAQFVIDYSELEEELTHLLDKEQLEAHMEKLKESVSSLEEVLHRTTPP
NLKALEKMREVKDKLQGVTEAFDASTRAARRCNQEFEQVKAQRFHLFSQCFEHVLLVIDQ
IYKRICRNRSAQAILSAENPEEPYLGGINYNCVAPGKRFMSMDNLSGGEKAIAALALLFA
IHSFRPAPFFILDEVDAALDNTNIGKVTSFIREESRENMQIIVISLKEEFFSKADALLGV
YSELDGCMFSRVLTLDLRPYPLAEEESDGETDKETRADRGSESCSPEVPS
NT seq
3753 nt
NT seq
+upstream
nt +downstream
nt
atgggttatctcaaacaaattgatatcgaaaactttaagtcgtggcgtgggaagcaagtc
attggaccttttatgcgatttaattgtattataggcacaaatggctccggtaagtccaat
gtgatggacgccctgagcttcgccataggcgagagggtcgcctctctccgggtgaagcat
ctgcgggacctggtccacggagcccacatcggtaaacctgtgtccgataccgcgcgtgtg
gcgctacgcttcttgaatgacgacgacaaagagacggtcttctctcgtacaataacaggg
gactcttctgcatatcatattaatggatctcatgtttcgcatgctaaatacatcgaggag
cttgaaaagattggcattgtgaccaaagctcagaactgtgtggtgttccagggggcggtg
gaggccatagcgttgaaggatccaaaggagaggactaagatgttggagtgcatctgtcag
tccaagcagtatgctgcagaatacaagacgaagaaagaagctctgatgaaggccaaggag
gacacacagtttcacttcaacaagaaaaaatcggccactgtggaacggaaacaggtgtcc
ctggaaaaagtcgaggctcagaaataccaggacttggtggatgacctgaaccaaaaacgt
ctgcagctgagtctttttgagctttatcacaacgagaagggcatcgatgccatcagcgac
accctgagggggaggaaggaggtcgcagcggaaatgaaccgggagttaggtgctgcggag
cagagcgtcaaagcccacaagaaagaacatggacgcctcactagagaggtgcagcacatg
gagaaggagatccgtggtcaggagcaagtcctgactcagtccaggtcgcagtacatcaaa
gccaaggtgaactcgtcccatcacgtgaagaaggccgacgagatctccgaagccgtgaag
aagaagaggcgggcgctggctgccaaggagcagcagctggaggagggtcggcaggaagtg
gccgagctccagagggcctggaggatgtacgagaagcagacccaggaaggagtggcgagg
gggagagacatcagtctggatgaggatcagctgcgtcagtacaaagcactgaaggagctg
gcccaaatgcagggcgctgtcctctgccagcaggccgacaagatgcactgggaagtcaga
gcagacagtgaaaaggtgctttttgaccagcgcagaaagaaggagatagaggtcgccatc
agaaacaaccaaactcacctggaagaattcatgagtagagcagagaaactagaggagtac
acccagaaatgcaagaagtcgcttgaagatcttgatgagcggcagcagagcctgactgca
gagcttcagcatgtgacccagcgtggagaggaggtgaagcaggagttggaccaggtgatg
gaggagctgaggagcgctcggctggacagccacgagagcaagaggcagcagcagcgccgg
gagctgctggagaaactccgcagactctaccctcagacggtctttgggcgcctgtccgac
ctttgcagcccggtccacaagaagtaccagctggccgtgaccaaagtgtttggcagatac
atgaacgctatcgtagtgtcgtctgagaaggtcgcccgcgactgcatctctttcctaaag
gagcagcgggccgagcccgagaccttcctgcccgttgactacctgcttgtgaatcccctg
aacgagcgcctgagggagattccaggagtcaagatggtggtggatgtggtgcaggtgaac
gccggcagcgctcagctggggaaagtggtgcagtacgtctgcggcaacgccttggtgtgc
gagaccatgagagaggcccgcagcgtggccttcgacagacccgaccgagtcagaacggtc
accctggatgggacgctgttcaaaacatccggcgttatctccggaggctccagcgacctg
cgcaccaaagctcgctgctgggaggagaaggacatgcgccgtctgaaggaacacagggac
cggctgatgaacgagatgcgcgacttgtcgagactgaaaaggaaggaggctaatttaaat
cagatgtttgctgagtctcagggagcccagacccgtctgaaatacacccggacggatctg
gaaatcctccggagtaaaaccatccccaaatgccaagcggagatctcccgtctggagagc
gaactatcaaaccttgagtgtcagctcgagatgcagcaggaggatctcgaagcgaaagat
gcggagatgaagagaattagagaacagatcgatcagattgatgacatggtgtttgcggac
ttctgcactaagatcggcgtggaaaccattagagagtttgagcaggaacacttgaaacaa
aaggcggagctcgacaagaaacggctggagttcgaaggtcagcaggcccgcttgaacgct
cagctggaatatgaagcaaagcagctggctcaggagaggaagaaactcggcaaaatggaa
gacaccatcaggcaggaggagcaagccacggtggaaagcagagaggttgagaacaatctc
ctggagaccgtagaggagtatcagaataagcttctggagatgaagaacgagcttctcctt
aaaaaaaaccaggtggcctcagtcaaagctgagctcaaccagaaaactcaaaagctgcag
gagaaaaacaaagagctgacgaagcttcagcgcgaggtcatgtccgcggagacggccttg
gagcagaagcgcatggctcgacacaacatgctgctcgcctgcaaaatccaggacctgcgg
atcaccatgctgtcaggcagcctggacgagatcagcgaggtgcagctcatgacggattcc
gaaagtacgacagccacgatggacatttatgaacgagaagctcagttcgttattgattat
tccgagctggaagaggagctcacgcacctgcttgacaaggagcagctggaggcgcatatg
gagaagctgaaggagtcggtctcctctctggaggaagtgctgcatcgcaccactccgcct
aacctgaaggctctggagaaaatgagggaggtgaaggacaagctgcagggagtgactgaa
gcctttgacgccagcaccagggcagccaggaggtgcaaccaggagtttgagcaggtcaaa
gctcagcggttccacctcttcagtcagtgctttgagcatgtgctgctcgtcatcgatcag
atctacaaacggatatgcagaaacaggagtgcccaggccattctgagtgccgaaaaccca
gaggagccatatttaggtggcatcaactacaactgtgtggctccagggaagcgcttcatg
tccatggacaatctgtctggtggagaaaaggccatcgctgctctcgctctgctgtttgca
atacacagcttccgtccagctcctttcttcatcttggatgaggtggacgcagctctggac
aacaccaacatcggcaaggtgacgagcttcatcagagaggagtccagagagaacatgcag
atcatcgtcatctccctgaaggaggagttcttctccaaagctgacgccctcttgggagtc
tactctgagttggatggttgcatgttcagccgcgttctgaccctggacctgcgtccttac
cctctggctgaagaggagagcgacggcgaaacggacaaggagacccgagcagacagagga
tcggagtcctgtagcccggaagttccttcatga
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