Gambusia affinis (western mosquitofish): 122835731
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Entry
122835731 CDS
T07758
Symbol
cd44b
Name
(RefSeq) versican core protein
KO
K06256
CD44 antigen
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
122835731 (cd44b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122835731 (cd44b)
04090 CD molecules [BR:
gaf04090
]
122835731 (cd44b)
00535 Proteoglycans [BR:
gaf00535
]
122835731 (cd44b)
00536 Glycosaminoglycan binding proteins [BR:
gaf00536
]
122835731 (cd44b)
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
122835731 (cd44b)
Exosomal proteins of other body fluids (saliva and urine)
122835731 (cd44b)
Exosomal proteins of colorectal cancer cells
122835731 (cd44b)
Exosomal proteins of bladder cancer cells
122835731 (cd44b)
CD molecules [BR:
gaf04090
]
Proteins
122835731 (cd44b)
Proteoglycans [BR:
gaf00535
]
Cell surface proteoglycans
Others
122835731 (cd44b)
Glycosaminoglycan binding proteins [BR:
gaf00536
]
Hyaluronan
Cell surface receptors
122835731 (cd44b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Phage_lipoprotein
DUF6480
Collectrin
DUF7871
Motif
Other DBs
NCBI-GeneID:
122835731
NCBI-ProteinID:
XP_043980948
LinkDB
All DBs
Position
LG08:14576611..14590855
Genome browser
AA seq
370 aa
AA seq
DB search
MWTFLVGVIFGILASGNSKQLQVNSRTCSYAGVFLVEGESRHSLSFEMASKVCEQLESTM
ASPAQVLEAYNNSMETCRYGWINNGSSVILRQTQHENCARNLTGFIVNSRTEDYFDAYCF
DENDSAEKNCSKAFHESRVLLSDTTALTSPQPLTDATIEPETIPPEDFRNAPTPASTPEG
LSKDDFTTVPEEGNPTGGSNVTSASTEMDLHDGSGMTSAQPEEEKITPVINPETTISSER
RPTEILEPTDAKPNSGGRKSLNSANDPKDSSSSDWLVVIGVIVAVGAILLVCAAVARRNG
WCGRKQTLNITTKDSSDGNGVAAAACSSRNPEREQEMVTLMNKETIQENGNTEEFTVITL
EQSPDKDQQA
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgtggacttttcttgtaggggtaatttttggaatactggcctctggcaattcaaagcaa
cttcaagtgaactctcgcacgtgcagttatgcaggtgtttttctggttgagggagagagt
cgtcactctctgtcttttgaaatggcctcaaaagtctgtgagcagctggagagcacaatg
gcaagtccagcacaagtcctggaggcctataacaacagcatggaaacttgcaggtacggt
tggatcaacaatgggagcagtgtcattctcaggcaaactcagcatgaaaactgtgcaagg
aacttgactgggtttattgttaactcacgtactgaagattactttgatgcctactgtttt
gacgaaaatgatagtgctgagaagaactgcagcaaagctttccatgaaagcagagtttta
ctctcagatacaacagctctgacatcaccacagccactgactgatgccacaatagagcca
gaaacaatcccaccggaggacttcagaaatgctccaacacctgcaagtacacccgaaggt
ctgagtaaagatgatttcactacggttcctgaggagggaaaccccactggaggaagcaat
gtcacttccgcttccactgaaatggacctgcatgatggatctgggatgacttcagctcaa
ccagaggaggaaaaaataactccagtgatcaaccctgaaacaacaatatcgagtgaaagg
agacctactgaaatattagagcccactgatgccaaaccgaatagcggaggaagaaaatca
ttgaattcggcaaatgatccaaaagacagcagctcatcagactggctggttgttattggt
gttattgtagcagttggtgcaattctccttgtatgtgcagctgtcgccaggagaaatggg
tggtgtggcagaaagcaaacgctgaatatcacaaccaaagacagcagcgacggcaatggg
gtcgcagctgcagcatgcagctcccgcaacccggagagagaacaggagatggtgaccctc
atgaacaaggagaccatccaggagaacggcaatacggaggagttcactgtcatcacgtta
gagcagtctccagataaagaccagcaggcctga
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integrated database retrieval system