KEGG   Gambusia affinis (western mosquitofish): 122835731
Entry
122835731         CDS       T07758                                 
Symbol
cd44b
Name
(RefSeq) versican core protein
  KO
K06256  CD44 antigen
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    122835731 (cd44b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:gaf04147]
    122835731 (cd44b)
   04090 CD molecules [BR:gaf04090]
    122835731 (cd44b)
   00535 Proteoglycans [BR:gaf00535]
    122835731 (cd44b)
   00536 Glycosaminoglycan binding proteins [BR:gaf00536]
    122835731 (cd44b)
Exosome [BR:gaf04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   122835731 (cd44b)
  Exosomal proteins of other body fluids (saliva and urine)
   122835731 (cd44b)
  Exosomal proteins of colorectal cancer cells
   122835731 (cd44b)
  Exosomal proteins of bladder cancer cells
   122835731 (cd44b)
CD molecules [BR:gaf04090]
 Proteins
  122835731 (cd44b)
Proteoglycans [BR:gaf00535]
 Cell surface proteoglycans
  Others
   122835731 (cd44b)
Glycosaminoglycan binding proteins [BR:gaf00536]
 Hyaluronan
  Cell surface receptors
   122835731 (cd44b)
SSDB
Motif
Pfam: Xlink Phage_lipoprotein DUF6480 Collectrin DUF7871
Other DBs
NCBI-GeneID: 122835731
NCBI-ProteinID: XP_043980948
LinkDB
Position
LG08:14576611..14590855
AA seq 370 aa
MWTFLVGVIFGILASGNSKQLQVNSRTCSYAGVFLVEGESRHSLSFEMASKVCEQLESTM
ASPAQVLEAYNNSMETCRYGWINNGSSVILRQTQHENCARNLTGFIVNSRTEDYFDAYCF
DENDSAEKNCSKAFHESRVLLSDTTALTSPQPLTDATIEPETIPPEDFRNAPTPASTPEG
LSKDDFTTVPEEGNPTGGSNVTSASTEMDLHDGSGMTSAQPEEEKITPVINPETTISSER
RPTEILEPTDAKPNSGGRKSLNSANDPKDSSSSDWLVVIGVIVAVGAILLVCAAVARRNG
WCGRKQTLNITTKDSSDGNGVAAAACSSRNPEREQEMVTLMNKETIQENGNTEEFTVITL
EQSPDKDQQA
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtggacttttcttgtaggggtaatttttggaatactggcctctggcaattcaaagcaa
cttcaagtgaactctcgcacgtgcagttatgcaggtgtttttctggttgagggagagagt
cgtcactctctgtcttttgaaatggcctcaaaagtctgtgagcagctggagagcacaatg
gcaagtccagcacaagtcctggaggcctataacaacagcatggaaacttgcaggtacggt
tggatcaacaatgggagcagtgtcattctcaggcaaactcagcatgaaaactgtgcaagg
aacttgactgggtttattgttaactcacgtactgaagattactttgatgcctactgtttt
gacgaaaatgatagtgctgagaagaactgcagcaaagctttccatgaaagcagagtttta
ctctcagatacaacagctctgacatcaccacagccactgactgatgccacaatagagcca
gaaacaatcccaccggaggacttcagaaatgctccaacacctgcaagtacacccgaaggt
ctgagtaaagatgatttcactacggttcctgaggagggaaaccccactggaggaagcaat
gtcacttccgcttccactgaaatggacctgcatgatggatctgggatgacttcagctcaa
ccagaggaggaaaaaataactccagtgatcaaccctgaaacaacaatatcgagtgaaagg
agacctactgaaatattagagcccactgatgccaaaccgaatagcggaggaagaaaatca
ttgaattcggcaaatgatccaaaagacagcagctcatcagactggctggttgttattggt
gttattgtagcagttggtgcaattctccttgtatgtgcagctgtcgccaggagaaatggg
tggtgtggcagaaagcaaacgctgaatatcacaaccaaagacagcagcgacggcaatggg
gtcgcagctgcagcatgcagctcccgcaacccggagagagaacaggagatggtgaccctc
atgaacaaggagaccatccaggagaacggcaatacggaggagttcactgtcatcacgtta
gagcagtctccagataaagaccagcaggcctga

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