Gambusia affinis (western mosquitofish): 122835917
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Entry
122835917 CDS
T07758
Symbol
cspg4
Name
(RefSeq) chondroitin sulfate proteoglycan 4
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
gaf00535
]
122835917 (cspg4)
04091 Lectins [BR:
gaf04091
]
122835917 (cspg4)
Proteoglycans [BR:
gaf00535
]
Cell surface proteoglycans
Others
122835917 (cspg4)
Lectins [BR:
gaf04091
]
C-Type lectins
Others
122835917 (cspg4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_2
Laminin_G_1
Cadherin_4
Big_9
DAG1
Motif
Other DBs
NCBI-GeneID:
122835917
NCBI-ProteinID:
XP_043981331
LinkDB
All DBs
Position
LG08:24229679..24318335
Genome browser
AA seq
2294 aa
AA seq
DB search
MRALHPVLVGALVTLLLCLPGPAHGESYFGDSHCNIVVVQDVVTFRLSLKFKTNRPSGLL
LLAAGMEDYLILELLNGKLQARMKVETGEVKLSSSQEVLLNNLRDHQVFLTLQDGKLTMT
IVNLFSTNVLVDLGGERLNIDRGIWLGGTGDLDTPYLSNAIPPFRGCITDVKFESHQFNI
LSSAFKQCQDTKESCSSEFEHADGETISFSTPDSFVSFSTWSESIRAPMSLEFLMKTTIE
DALLVFHHGQMSDLIAIGVVKGYLKGVLDLGDGLKSLENTQVQLDDDQWHRVNIQVSPDS
FVLKVDSQSSSIPLDSSQKLDLVGNLYFGGIQKKMKEVFSESGSLNRFEDFITSESFIGC
FGEIKVNQRNKGLQDALVTKDVHIKCEGDDYDYSTYGDFDGPTTSSPIIDFVTQFAEPQL
NEQECYPTDSEPEVFRNVTKLLNITTLRVPDGEEAYLDINNLRPTFDLSAAGMSQSQIIF
TLTGDPWYGLVDINVNRNFEKFSLLDVVNKKIKYMHDGNGGTSDKISLYVRVLSNSYLPE
CLKGTHSYSIPVEIIPGRASPGSTVELPITEKGRSHLSPSLLKISQSASNCDQLVITVTS
APSFDFGYLVNSQQPGRRISEFTCRELKDGNIYFVHKAGSTSEMTLKMSDGGSVTQSNTF
MFLAIQPNAVIVGTTGLSVVQGSNASIGIQNLAVIPHPRNGDILYIVTQPPVLGELRVRG
SDGVYTQVTSFHQFHLDRELIRYFSTDADSHENTVVDNILFDIHLGEFVLTNNLFRVEIQ
PPKVKVSYLEPLEAKPGEKQIITKLQAEVQGKNPNPQTIKYILVKSPAHGSLQISDKELN
EGDMFTQKDISDNALSYIVRMQGFVDTNDQFQFRVSVEDQYSPLYSFPISILAGTDDYVL
TNNHLVVLQGGEQALNKNHLWLQFSVSPDILYRVTQEPKHGRLIRDTPGLPRFDGAVRYF
SNEDLVHGQLIYKHDGSRTTSDEFHFSATQEDTDSPKVVTGIFNIQIQFKNEHVPVRIVD
KVFNVVRRGQRLLTTNVIQFKDDDSNFNDTQIVYAREGILSGNIMSASNPSQPVFRFTQA
DLREKKILFVHHGADQERFPLQVSDGFHKTTAMLQIQAGEPYLQLVNNTMIVIDHGSTKT
LDTSLLSADSNMDIRDDSEIKFEVTSPPSDGRIIVSGIEASQFTQEDLKKGVVSYEHNYE
SLKAKDSFGFTVRAKELSEKGIFKIKIFKQGYLSEPEVITNEVIISYEGEHTIISQDHLK
VEQTDILPTDMIFTLKRLPSLGHVVMLKNSSEVTASPVLDYIHSFSQEDIDLSRVFYVSA
SLQGSDSFTLDVSNGFSTVEDLTVKVEIMPRFIPIQASNFSIKEGLSRVINEQILNISNH
FYSLANIDFSVEELPQHGEIRNQEGDELSYFTWDDVKFGQVVYMHDSSETMEDSFTLSAS
SYEIERRSLPVTISVTIIPVNDEPPMVTRNTGLEVLPGEQVAITASVLSTEDADSPAEEL
VYHVEMPTNGVMTLKQEPGQSILNFSQAHINRGEIIFTHEGEESGEFSFTVTDGEHTSPL
YRFVIKARPHTITLETGEELMVFPGTRQVIQTANLKVGTSEDGNEASFLLVRAPRLGRLI
LANERNQFVETNLFSQSQLESGAVYYEHQLPTEPFWVVRDSMEFTVSPQASADVRHALPI
KVSYHAAHSNISSQMWRNKGLEIVQGQRKAIDNSILDASNLLGSLPEEKKMDVDVLFEIK
RFPDHGRITLKGEDLPRDDPFFTQSDVSQGKLEYLHDDSGAAFDSLAFKAYLKLGSGGRA
SPAESIILEEIFHISVKRRGSNPPELVTTDMLLEVLQGSKTSLTQKHLNTQDEDNPPDEV
LFKVTKAPRNGYLLNSVTSEPLSKFTQEMINRVEVAFQSDGTLKDGFVEFTISDGEHETE
PHTLHIGILARTLLLNQVPEIKVRQGDDQILVTEEMLRVSTGGPVEEDILYKITNTPKYA
AVMVDRQPTSAFTQKQIKEGRVSVRFVKSTSPRDSVSFTARSRAANVSSVLNITVQPLAK
IAQNPLLPQGSLIQLDRKLLDASPLANKTRASPTFTVIQQPRGARIVEFKDPDAGQPIQT
FTQKDLDEGRVAMEILDTASRSKAKGNQDEARFLLKAHGVPPAECILSFQTSPYNTSVVY
PATLLKNPDKKFRLPGDNVTPSSPDSGTNGKPHVSRRGNFWSIFIPILVVLLLLLLAGVL
AYYLIRKNKTGKHNVQTVASKPKNGEAATTETFRKTDPANNIPMSNVDSKGADPELLQHC
RTTNPALKKNQYWV
NT seq
6885 nt
NT seq
+upstream
nt +downstream
nt
atgagagccctgcatccagtcctggttggtgccttggtgaccctgctgctctgcctgccc
ggccccgcgcacggagaatcttactttggggacagccactgtaacatagtagtcgtccaa
gatgttgtaacctttcggctgtctctgaagttcaaaacgaatcgcccaagtggtcttctg
cttctggctgctggcatggaggactacctgatcctggagctgctgaacgggaaactacag
gcacgaatgaaagtggaaactggagaagtcaagctgtcctcttctcaagaagtgctgttg
aacaacctcagggaccaccaggtgtttctgacattgcaagacggcaagctcaccatgacg
atagttaatctgttttcaacaaacgtcctggtggatcttggtggagaaaggctaaatatc
gaccgtggcatttggcttggaggaaccggtgacctggacactccctatctcagcaacgcc
atcccacctttccgtggctgcattaccgacgttaagttcgaatcccatcagttcaacatt
ctcagctcagcatttaagcagtgccaagacaccaaggaatcttgcagcagtgaatttgag
catgcagatggggagacaatcagtttcagcactccagattcctttgtgtccttctctaca
tggagtgaatctattcgtgctccaatgtcactggagtttctaatgaagaccaccatagag
gatgctttacttgtcttccatcatggccaaatgtcagatttgattgccatcggtgttgta
aaaggatatctcaaaggggttttggatctaggagatggtttaaagtcacttgaaaataca
caggtgcagctggatgatgaccagtggcacagggtcaatattcaggttagcccagattct
tttgttcttaaagtagacagccagtcatcctccattcctctagactcatcacaaaaactg
gatttggtaggaaacctgtactttggaggtatccagaagaagatgaaggaagtatttagt
gaaagtgggtccttgaatcgttttgaggacttcatcacatctgagtctttcattggatgc
tttggggaaattaaagtaaatcaacggaacaaaggtctgcaggatgctttggtgaccaaa
gatgtccatataaaatgtgaaggagacgactatgactactcaacttatggagattttgat
ggacccaccacttcttcacccatcattgatttcgtgactcaatttgctgaacctcaatta
aacgagcaagaatgttatccaaccgattctgaacctgaggtgttcaggaatgtaacaaaa
cttctcaacatcaccactttgcgagtacctgatggtgaagaagcctatcttgatatcaac
aacctgagacctacatttgacctcagcgctgctgggatgagccaatcgcaaattatcttt
acactcaccggtgatccctggtatggcctggttgacattaatgtcaataggaactttgaa
aaattctctctgcttgatgtggtcaacaagaaaatcaagtatatgcatgatggaaatgga
ggaaccagtgataagatctccttatatgtacgtgttctaagtaacagctaccttccagag
tgcctaaaaggtacccacagttattcgattccggtggaaattattccaggccgggcctca
ccaggatccactgtagaacttcctatcacagaaaagggaagatctcatttgagccccagc
cttcttaaaataagtcaatctgcctccaattgtgaccagttagtaataactgtgacctca
gctccctcttttgattttggttaccttgtaaatagtcagcaaccaggaagaagaatctca
gagtttacatgcagagaactgaaagatggaaatatctattttgtacacaaagcaggcagt
accagtgaaatgaccttgaaaatgtcggacggtggatcagtaactcagtcaaacactttt
atgtttttggcgattcaaccaaatgcggtcattgtcggcaccactggccttagcgtagtc
caagggagcaatgcgtcaatagggattcagaatctggctgtcatccctcatcctcgtaat
ggggatattttatacattgtcacacaacctcctgtgttaggagaattaagagttagggga
agtgatggcgtgtacacacaagttacaagttttcatcagtttcatctggatcgagagcta
attaggtattttagcacagatgcagatagccatgaaaacactgtggtggataacattctg
ttcgacatccatttgggagagtttgttctcacaaataacctcttccgagttgagatccaa
cctcccaaagtaaaagtttcatatctggaacctctggaagccaaacctggagagaagcag
ataatcacaaagcttcaggctgaagtgcaaggaaaaaacccaaatccgcaaacaattaaa
tacattcttgtgaagtctcctgcacatggtagtctccagatatcagacaaagagttgaac
gagggtgacatgttcacacagaaggacatttcggacaatgctttgagttacatagtgcgg
atgcaaggatttgtggatactaatgaccagtttcagtttagagtctctgttgaggaccag
tactctccattatacagcttcccaataagcatacttgctggaacagatgactatgttttg
acaaataatcatcttgttgttttacaaggaggtgagcaagctttgaacaaaaaccatctc
tggctgcagttttcagtttccccagacattttgtatagagtcacacaagaaccaaagcat
ggacgccttataagggataccccaggactgcctagatttgatggggcagttagatatttt
agtaatgaagatcttgtacatggtcagctgatttacaagcatgatggttccaggactaca
agcgacgagttccacttctcagccactcaggaagacacagacagtccaaaagtggtgacg
ggtatcttcaatatacagattcaattcaagaatgagcatgtccctgtgaggatagtggat
aaagtcttcaacgtggtccgccggggtcagcgcttgctcacaaccaacgtcattcagttt
aaagacgacgactcaaatttcaatgacactcaaattgtttatgccagagaaggaattctt
tcgggcaatatcatgtcggcgtccaatccgtcgcagccagttttccgttttacacaagct
gacctgagggaaaagaaaatcttatttgttcatcatggagcagatcaagaacggtttccc
ctgcaggtttcagacggctttcataaaaccaccgcgatgcttcagatccaagctggtgag
ccctaccttcaattggtgaacaacacaatgatcgtcattgaccatggaagtaccaagacc
ctagataccagcctattgagcgcagactccaacatggacatcagagatgatagcgagatt
aagttcgaggtaacgtccccacccagcgatggcaggattatcgtgagtgggattgaggct
tcacaattcacccaggaggacttgaaaaagggagtcgtctcatatgagcacaattatgaa
agccttaaggccaaggattcctttggattcacagtgcgagctaaggaactttctgaaaaa
ggcatatttaagataaagatttttaaacaaggttacctttcagagccagaggtgataacc
aatgaggtcatcatttcttatgagggggagcataccataatcagccaggatcatctcaag
gtggagcagaccgatatccttcctacagacatgattttcacactgaagagattgcctagt
ctcggtcatgtggtcatgctgaaaaacagttcagaggtcacagcctccccggtcctcgat
tacatccactctttctctcaggaagacatcgatctgagccgcgtcttttacgtgtctgca
tctttgcagggaagcgacagtttcacgttggatgtgagcaatggtttcagcacggtggag
gacctgaccgtcaaagtggaaatcatgccccgatttatacccattcaggcgtccaacttc
tccatcaaggaaggcctcagtcgcgtgattaacgagcagattctgaacatctcgaatcac
ttctacagcttagcaaacatcgacttttctgtggaggagcttccgcagcacggtgaaatc
cgcaaccaggaaggagacgagctctcttactttacatgggatgatgtaaaatttggacag
gtcgtctacatgcacgacagcagcgagaccatggaggacagtttcacactctctgcctcg
tcgtacgagattgagcgccgcagcctccctgtcaccatctcagtcactatcataccggtg
aacgatgagccaccaatggtgacacgcaacaccggcctggaggttcttcccggcgagcaa
gtcgccatcaccgccagtgtgctgagcacagaggacgccgattcccccgcggaggagctg
gtttatcacgtagaaatgccaaccaacggggtgatgacattaaaacaggagccggggcag
agcattctgaatttctcccaggctcacataaacagaggggagatcatcttcacccacgag
ggtgaagaatccggtgagttcagcttcacggtgacagatggagagcacacgtctcctctc
tatcgatttgtcatcaaggccaggcctcacaccatcaccttggaaacgggggaggaactc
atggtgttcccaggaacacgacaggtcatccagaccgctaaccttaaagttggaaccagc
gaggacgggaatgaagcgagcttcctgctcgtccgtgcgcctcgtttgggaaggcttatc
ctggccaatgagcggaaccagtttgtagaaactaacttgttctcacagtcacagttggag
tctggagcagtctactatgagcaccagctgcccactgagcctttctgggtggtcagagac
tctatggagttcactgtatcacctcaggcttctgcagacgtccgccacgcactgcccatc
aaagtctcctaccatgctgctcatagcaacatttcttctcagatgtggaggaacaaaggg
cttgaaattgtgcagggtcagagaaaagcaattgacaattccattcttgatgcctccaac
cttctgggaagtctacctgaagaaaagaaaatggacgtggacgttcttttcgaaataaag
cgtttccctgatcatggtcgtatcaccctaaagggtgaggatctaccccgtgacgatccg
ttcttcacacaatcagacgtatctcagggaaagttggagtatcttcacgatgactcgggg
gctgcttttgacagccttgctttcaaggcctatctgaagttaggaagtggtggtagggcc
tcccctgctgagtccataatcctggaggagatctttcatatttcagtcaaacgacgtggt
tccaacccccctgaattagtcactacagatatgcttctggaagttctccaaggctccaag
acctcactaacccagaagcatctcaacacccaagatgaagacaatccaccagatgaggtg
ctcttcaaggtgaccaaagcccctcgtaatggctatctccttaactccgttacgtcagaa
cctctctccaagttcactcaagaaatgatcaatcgcgtagaggtggccttccagagtgac
ggcacccttaaagacggatttgtggaattcaccatatcagatggcgagcatgaaacggag
ccacacacactccacataggaatcttagctcgcaccctgcttctcaatcaagtcccagag
atcaaggtacgacagggagatgatcagattcttgtgactgaggagatgttgagggtctct
acaggtggtcctgttgaggaggacatcctttataaaatcaccaatactccaaaatatgcg
gctgtcatggtagacaggcagcctacatctgccttcacccagaaacagatcaaagaagga
agagtcagtgtccgttttgtcaagtccacttcaccccgagacagtgtttcgtttacagcc
cgtagccgggctgccaatgtttcctcagtcctcaacatcactgttcagcctctggctaaa
attgctcaaaatcctttattacctcaaggctcacttatccagctggacagaaagcttttg
gatgcatctccactagctaacaagacaagagcctcacccacattcacagtcatccagcag
ccaagaggagctcgtattgtggagtttaaggatcctgatgctggccagccaatacagaca
tttacccagaaggacctggatgaaggccgtgtagcaatggaaatattagatactgcctca
agatcaaaagcgaagggtaatcaggatgaagctcggttcctgctgaaagcccatggagtc
cctccagcagaatgcatcctttcattccagacaagcccttacaacacctctgtagtatat
cctgccactctgctaaagaatcctgataaaaaattcaggctcccaggagataatgtcacc
ccatcatcccctgactctggtaccaacgggaaaccacacgtttcccgtcgtgggaatttt
tggtccatcttcattcccattctagttgtcctccttctcttactactggcaggcgtcttg
gcctactatctaatccgtaaaaacaaaacaggaaaacacaacgtccagacagtggcctca
aagcccaaaaacggagaggcggccacaacggaaacctttcgcaaaacggacccagccaac
aacattcctatgtccaatgtggactctaaaggggcggatccagagttacttcagcactgt
cggacaacgaacccggccttgaaaaagaaccagtactgggtttga
DBGET
integrated database retrieval system
