KEGG   Gambusia affinis (western mosquitofish): 122835958
Entry
122835958         CDS       T07758                                 
Symbol
wdr61
Name
(RefSeq) WD repeat-containing protein 61
  KO
K12602  WD repeat-containing protein 61
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    122835958 (wdr61)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122835958 (wdr61)
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     122835958 (wdr61)
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_CDC20-Fz Beta-prop_WDR90_POC16_2nd WDR55 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd EIF3I WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_Aladin Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_RIG_2nd Beta-prop_ACSF4 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_WDR35_TULP_N eIF2A Beta-prop_WDR19_1st Beta-prop_VPS8 Beta-prop_WDR41 Beta-prop_NWD2_C Tricorn_2nd WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_HPS5 NBCH_WD40 Ge1_WD40 Beta-prop_NUP159_NUP214 Beta-prop_Nup120_160 PROPPIN Cytochrom_D1 WDR54 WD40_like WD_LRWD1 VPS8_N Beta-prop_IFT122_2nd Beta-prop_pof12 DUF2415 Nucleoporin_N
Other DBs
NCBI-GeneID: 122835958
NCBI-ProteinID: XP_043981396
LinkDB
Position
LG08:24461071..24466573
AA seq 305 aa
MSTQYSILFKQEHAHDDAIWTAAWGKSEADGSETIITGSLDDLVKVWKWSDEKLELQWTL
EGHQLGVVSVDISHHGAIAASSSLDAHIRLWDLESGKQIKSMDAGPVDAWTVAFSPDSKY
IATGSHLGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATG
KLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHGSWVLNVAF
SPDHTHFVSSSSDKSVKVWDASTRACINTFFDHQDQVWCVKYNSKGSKIVSAGDDRAIHI
YDCPL
NT seq 918 nt   +upstreamnt  +downstreamnt
atgagtacccagtacagcattctgttcaagcaagaacatgctcatgacgatgccatctgg
acagcagcatggggcaaaagtgaagcggacggctcggaaactatcatcaccggttcacta
gatgatttggtcaaagtctggaaatggtcggatgagaagctggagctgcagtggaccctg
gagggccaccagctgggcgtggtctctgtggacatcagtcaccacggagccatcgcggcc
tccagctccctggacgcacatatccgcctgtgggacctggagtcggggaaacagatcaag
tccatggacgccggaccagttgatgcgtggacagtcgccttctctccagactctaagtac
atcgccacaggcagccatcttggaaaagtgaacatctttggtgtggaaagtggcaagaag
gaatattccctggacaccagaggaaaattcatcctcagtatagcttacagccccgatgga
aagtatttagccagcggcgcgatcgatgggatcatcaacatcttcgacatcgccaccggg
aagctactccacacacttgaaggtcacgccatgcccatcagatccctcaccttctccccg
gactcccagctgctggtcacagcctccgacgacggatatatcaaaatatacgacgtacaa
catgccaaccttgccggcacgctgagcggccatgggtcctgggttcttaatgtggcgttc
tctccggatcacacccactttgtctccagctcgtctgacaagagcgtgaaagtttgggac
gccagcaccagagcttgtatcaacactttctttgaccaccaagaccaggtgtggtgcgtg
aagtacaacagcaaaggctcaaagatcgtctcggccggcgacgaccgcgccatccacatc
tacgactgcccattgtga

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