Gambusia affinis (western mosquitofish): 122836049
Help
Entry
122836049 CDS
T07758
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-4-like
KO
K04861
voltage-dependent calcium channel alpha-2/delta-4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04010
MAPK signaling pathway
gaf04260
Cardiac muscle contraction
gaf04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122836049
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122836049
04261 Adrenergic signaling in cardiomyocytes
122836049
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
gaf04040
]
122836049
Ion channels [BR:
gaf04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122836049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA_3
dCache_1
VWA_2
VWA
ArsR
CobT_C
VWA_CoxE
Motif
Other DBs
NCBI-GeneID:
122836049
NCBI-ProteinID:
XP_043981629
LinkDB
All DBs
Position
LG08:complement(29235926..29303752)
Genome browser
AA seq
1098 aa
AA seq
DB search
METGTLGIRSLLRILGCFCLWILADAQMKIPPETVQQWASVFSVQLRDLSTKFSGSLLLQ
KKLKDVESIIKITELNGDDLLRDYSEEIERMLGSKMKSVKRLAESAEDADLYHEYNSSLQ
FDYYNSMLINTMDEDGNYVELGGEFPLEENEHFNNLPVNTQQSNIQVPTNVYNKDPKLLN
AIYNSEALNDVYVNNFLRDPTLTWQYFGSSYGFFRIYPGIKWTPDNNGVVAFDSRNRNWY
IQAATSPKDIIIMVDISGSMKGLKMTIAKHTINTILDTLGENDFVNVIAYTDYVRYVEPC
FRGTLVQADLDNREHFKLLVEELHVKGEAKIKNAMKESFKILNEVRMKGQGSMCNQAIML
ITDGAMEDYESVFEEFNWPERRVRVFTYLIGREMTFAQKTKWIACNNKGFYTHISTLADV
QENVMEYLHVLSRPMVINHDHDIIWTEAYMDTVLPNTKELFYTKAQSLLLMTSVAMPVFS
KKKETLSHGILLGVVGTDVPLMEVMKLAPRYILGPHGYAFLLNNNGYILAHPDLRPLYKD
GKKLKPKPNYNSVDLSEVEWEDKEEKLRTPMVKGQTGSMTLNIRASVDKGKRPMYLINNY
FYTDIAETPFSFGLVLTKGHGSLMFTGNVSVEEGLHDMTSPDLSIASEWTYCETDIDPDH
RKYTQHQAVIRYLQGKEPDLECDELLLQQILFDAVLTAPLEAYWNSVMLNDRVEPGVETA
FLGTRSGLMRLMRYAGTETRVAKKFLTPSDKDNLFTIDHFPLWYRLAVENTPGRFLYYAV
NDKGVKYVIATTAVTVSSGERMAMAGAIGVQMSLDWLEKRFWAIAKQPSDTDCSNVEGVC
PLSCENDDLSCYLVDNNGFILLSKERNEVGRFFGEVDGSVMASLIKMGMFKKVSLFDYQA
MCKNSHHHASSARPLLSPFYMILALMRWLFSNALMFVLDFNFCGLWHSDYFVDAKAGYHT
SHKQKKVDALQPCDTAYPGFMYDSSVREANSLIKCGRCQKMFVVQQIPDSNLVLVVTQAT
CDCSRQFGPILLQPKEIKYNATVKCNRMKSQKVRRRPESCHAYHPKEDAKDCGGASAISM
SLCIFAASLLFSVLLQWT
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atggaaacaggaacgttgggaataaggagcctactgaggattctgggatgtttctgcttg
tggattttggctgatgctcaaatgaagatcccaccagagacggtgcagcagtgggcatcg
gtgttctctgttcagctccgagacctttcaaccaaattctctggctcgctgctacttcag
aagaaactaaaggatgtagaatccattatcaagattacggagctgaatggagatgattta
ctgagggactactctgaggaaattgaacgaatgttgggaagtaagatgaagtctgtaaag
aggttagcagagtctgcagaagatgctgacctgtaccatgaatacaacagttcactgcag
tttgattattacaactccatgctaatcaacacgatggacgaagatgggaactatgtagag
ctgggcggagagtttccgcttgaagaaaacgaacattttaacaacctgcctgtgaatact
cagcagagcaacatccaagttcccaccaatgtctacaacaaagatcccaaactgcttaat
gccatctacaactccgaggctttgaatgatgtctacgtcaacaactttctgagagatccc
acacttacctggcagtactttggcagttcttatggcttttttagaatctaccctggtatt
aaatggactcctgacaacaacggtgtggtagcctttgacagtagaaacagaaactggtat
atccaggcagctacatctcccaaggatattatcatcatggtggatatcagtggcagcatg
aagggattaaagatgaccatagccaaacacaccattaacaccatcttggacacactagga
gagaatgattttgtcaatgtcattgcttacactgactatgttcgatatgtggagccatgt
ttcagaggaacattggtgcaggctgacttggacaatagggagcactttaagctgctggtg
gaggagctgcatgttaaaggagaagcaaaaataaaaaatgccatgaaggagtcctttaag
atcctaaatgaggtgaggatgaaaggtcagggcagcatgtgtaaccaggccatcatgcta
atcacagatggagccatggaggactatgagtctgtctttgaagaatttaactggccagag
cgcagggtcagagtgttcacttacctgattggtagagagatgacatttgctcaaaaaacc
aagtggattgcttgtaacaacaagggtttctacacacacatctcaactctggctgatgtt
caggagaatgtcatggagtatctgcatgtgctcagtcgaccaatggttatcaaccacgac
catgacatcatctggacagaagcctacatggatacagtgcttcccaacacaaaggagctt
ttctacaccaaagctcagagtctgctgctgatgacttcggtggccatgccagttttcagc
aagaagaaggaaacgttgtcacatggtatcctgttgggtgtggttggcactgatgttccc
ctcatggaggtgatgaagctggcgccaagatacatactgggaccgcatggctatgccttc
ctcctcaacaacaatggctacatcctggctcatcctgacctacgacctctgtataaagat
ggcaagaagctgaagccaaagccaaactataacagtgtggatctgtcagaggtggagtgg
gaggacaaagaggagaagctgaggacacctatggtgaaaggacagacaggcagcatgact
cttaacatcagagcctctgtggataaagggaaaagaccaatgtacctcatcaacaactac
ttctacacagacattgctgaaacacctttcagctttggcctggtgctgaccaagggtcat
ggcagtctgatgtttacaggaaatgtatcagtggaagaaggtctgcatgacatgacctcc
cctgacctcagcatcgcctctgagtggacttactgtgagacagacatcgacccagatcac
cgaaaatacacccagcatcaagcggtcatcagatacctacaggggaaggagcctgacctg
gagtgtgatgaattgttgctccagcagatattgtttgacgccgttttaacagccccactg
gaggcttattggaactcagtgatgcttaatgacagggtggagccgggggtggagacagct
tttcttgggactcgctcgggcctgatgaggttaatgagatatgcaggaacggagaccaga
gtggcaaaaaaattcctgactccatcagacaaagacaacctgttcaccattgaccatttc
cccctctggtaccgcctggcggtggaaaacactcctgggagatttttgtactatgctgta
aatgacaaaggagtgaagtatgttatagcaacaacagctgtcactgtgtcatctggagaa
agaatggccatggctggagctatcggggtacagatgtccttggattggctggagaaaagg
ttctgggccattgccaagcagcccagcgacacagattgctcaaatgttgagggggtgtgt
cctctgagctgtgaaaatgatgacctgagttgctacctagtcgacaacaatggcttcatc
ctgctttccaaagagaggaatgaagttggtcgtttctttggggaagtggatgggtccgtt
atggcttcactgatcaaaatgggaatgtttaaaaaagtgtctctgtttgactaccaggct
atgtgcaagaacagccaccatcatgccagcagtgctcgacctttgcttagtccattctac
atgattttggctttgatgagatggctcttctccaacgctttgatgtttgtgctggacttc
aacttctgcggtctatggcactctgactattttgttgatgccaaagctggctatcacaca
tctcataagcaaaagaaagtggatgcgctgcagccctgtgacactgcataccccggcttc
atgtatgactcatcggtcagggaggccaacagtctgatcaagtgtggacgctgtcagaag
atgtttgtggtgcagcagattcctgacagtaacttggttctggttgtaacacaagccacc
tgtgactgctcccgtcaatttggacccatcctgctgcagccaaaggaaattaaatataat
gcaactgtgaagtgcaacaggatgaaatctcagaaggtgcgaaggcgtccagagtcctgc
cacgcctaccacccaaaggaggatgccaaggactgtggaggagcatctgccatctccatg
tctctttgtatctttgctgcatctcttcttttctcagtgctcctccagtggacataa
DBGET
integrated database retrieval system
