Gambusia affinis (western mosquitofish): 122836140
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Entry
122836140 CDS
T07758
Symbol
siah1
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04115
p53 signaling pathway
gaf04120
Ubiquitin mediated proteolysis
gaf04137
Mitophagy - animal
gaf04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122836140 (siah1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
122836140 (siah1)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
122836140 (siah1)
09143 Cell growth and death
04115 p53 signaling pathway
122836140 (siah1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122836140 (siah1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122836140 (siah1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122836140 (siah1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
Motif
Other DBs
NCBI-GeneID:
122836140
NCBI-ProteinID:
XP_043981783
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Position
LG08:complement(4082202..4112763)
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AA seq
338 aa
AA seq
DB search
MSVVKSNPTVALHSPPWNSFFRLFPCVAARNVHSAKEVPTFQDQKKAAFGNLMDEEMSRQ
TATALPTGTSKCPPSQRVPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSN
CRPKLTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKTEHEELCEFR
PYSCPCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSC
FGFHFMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIH
EGIATAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtgaaatccaatccaaccgtcgctctgcattctccaccctggaattccttc
ttcagactcttcccatgcgtagctgcgaggaacgtccactccgctaaagaggtccccaca
tttcaagatcagaagaaagccgcctttggaaatcttatggacgaagaaatgagtcgccag
accgccaccgcgctgcccacaggaacctccaagtgccccccgtctcagcgcgtgcccacc
ctgtcgggcaccaccgcctccaacagcgacctggccagcctgttcgagtgtcccgtctgc
ttcgactatgtgctgccccccatcctgcagtgtcagtctggacatctggtgtgttccaac
tgccggcccaagctcacctgctgtcccacctgcaggggcccgctgggctccatcaggaac
ctggccatggagaaggtggccaactccgtcctgttcccctgcaagtacgcgtcgtcgggc
tgcgaggtcacgctgccgcacaccgacaagacggagcacgaggagctgtgcgagttccgg
ccgtactcctgcccctgtcccggcgcctcctgcaagtggcaggggtcgctggacgccgtc
atgccgcacctgatgcatcagcacaagtccatcaccacgctgcagggcgaggacatcgtg
ttcctggcgacggacatcaacctgccgggcgcggtggactgggtcatgatgcagtcctgc
tttggcttccacttcatgctggtcctggagaagcaggagaagtacgacggccaccagcag
ttctttgccatcgtgcagctcatcgggacgcgcaagcaggcagagaacttcgcctaccgg
ctggagctgaacggccaccggcgccggctcacctgggaggccacgccccgctccatccac
gagggcatcgccaccgccatcatgaacagcgactgcctggttttcgacacgtcgatcgcg
cagctgttcgccgagaacggaaacctgggcatcaacgtcaccatctccatgtgctga
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