Gambusia affinis (western mosquitofish): 122836181
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Entry
122836181 CDS
T07758
Symbol
prdm11
Name
(RefSeq) zinc finger protein 862
KO
K24644
PR domain zinc finger protein 11 [EC:2.1.1.-]
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122836181 (prdm11)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
122836181 (prdm11)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
SET
Zn_ribbon_PRDM4
FOG1-like_PR
Dimer_Tnp_hAT
DUF7822
WD40_alt
DUF6448
Motif
Other DBs
NCBI-GeneID:
122836181
NCBI-ProteinID:
XP_043981879
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All DBs
Position
LG08:4758891..4767001
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AA seq
1035 aa
AA seq
DB search
MTEQPSDLWFCEDCRKYFQEECPSHGPPLFVPDRPVAPGPANRAALTVPSGLEVVTEGGQ
VDVRCVDAIFPKGALFGPYQGELVSKEEPASSFSWIIVGLNNSSQSIDGGDETKANWMRF
VHTSSEDSDRNLTAFQHSGNIYFRVCRRLEAGEKLRVWYSDDYIQKLQCVSQDSINRNLD
TGPETSTVPRSLQKELPAPKLCTGKQSCEETDGQPPAKKKKIDLIFKDVLEASLEDCTKP
RSGSSPSVPNLKAEKGEDNLTSGEPSTSFCPNCIKLKRRILELEEELSHLRKQQGNSVGP
SSSELQPDPPHPEQGPIEDSQGMEPLTPTQTVLDEDDQEVDSADESVSADLVISPEDLSK
PYSGSSRRIRRFKQEWLKKFWFLRYSPTLNEMWCHVCRQYTVQSSRTSAFIIGSKQFKIH
TIKLHSQSNLHKKCLQLYKLRMHPEKTEEMCKNMTILFNATYHLALEGRAFSDLRPLAEL
LKKCELKIVDQYMNEGDCQILVHHIARALKEELAEKMRLSPFLSVIMDAQNDDLYSDLVA
VYVQFTTSDSSPQMEFLSLERVSIPNVDGYLQLLDRAFSVLGLRFQDLLVVGLGVDGTNI
SSGIRGSLYISVQKTFPWILCLPILIHRPHLEVLDAISGKELSCLEDLENNLKQLLSFYR
YSPRMMAELRSTAPTLSEETAFLGDIRAVRWIIGEPNVLNALIKDYLEVLAHLKEISSQT
QRADAAAIALTLLQFLMDYQSVKLIYFLLDIIAVLSRLALTFQGEHLLVSQVEARLEEAI
QEIGQLVDCPGEYLQEFEENFRESFNGVALKNLRVAESKFQSIRKKICSRSQGILSQRLD
LQSRSFTKACKVLDLDSWPGNQEDLKTFGEEEIQIIFNHLDSIPSAGQEGRMEKRSNLLV
EWKELKVDYFSMNSFRDVLIHICRYKQRFPLLNQILQVVRVLPSSTACCDKGRGALQRIC
KNNRSRLTLEQMNDLLTVAVNGPPVANFDAKRALDSWFEEKSGSSHSLSSEVLNRTSDAD
PKSGLHSGDINAEYL
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagcagccatcggacctctggttctgcgaggattgtcggaagtatttccaggag
gagtgtccgtcccacgggccgccgctcttcgtccccgataggccggtggccccaggaccg
gccaacagggcggctctcacggtcccatcaggcctggaggtcgtcactgagggaggccag
gtagatgtccgctgcgtggatgcaatcttcccaaagggggcgctgtttggtccgtaccag
ggtgagctggtgtccaaggaggaaccagccagctccttctcctggattattgttggtttg
aacaattcgtctcagtccatcgatggcggcgatgagaccaaagccaactggatgaggttt
gttcatacatcatcagaggacagtgaccggaacctgacagccttccagcacagcggaaac
atctacttcagagtctgcaggaggctggaggccggagagaagctcagggtttggtacagc
gacgactacatccagaaacttcagtgcgtctctcaagacagcatcaatcgcaaccttgac
acaggtcctgagacatcaacggtcccccgaagtctccagaaggagcttccagctcctaaa
ctgtgcaccggcaagcagtcctgtgaagaaacagatggtcagcctcctgccaagaagaag
aagattgacctgattttcaaagacgttctggaagcttctctggaggactgcactaagccc
aggtctggatccagtcccagcgttcccaacttaaaggcggagaagggtgaggataacctg
accagcggagaaccctccacctccttctgccccaactgcatcaaactgaagaggaggatt
ctggagctggaggaggagctgtctcatctcagaaagcaacaggggaactcggttggtcca
tcaagttctgaactccagccggatccaccgcatcccgaacagggtcccatcgaggactct
caagggatggaacccttgacgcccactcagacggtactggatgaagatgaccaggaagtg
gactcggctgatgagtcggtttcagccgaccttgtgatttccccagaggacttatcaaag
ccttactctggatcaagcagaagaattcgccgcttcaagcaagagtggctgaagaagttc
tggtttcttcggtactcaccgacccttaatgaaatgtggtgccatgtctgccgccagtac
accgtccaatcgtctcgaacgtcagccttcatcatcggctccaagcagttcaagatccac
accatcaagctgcacagccagagcaacctccacaagaagtgtctgcagctctacaagctg
cggatgcatcctgagaagacggaagagatgtgcaagaacatgacgatcctgttcaatgcg
acgtaccacctggctctcgagggaagggccttttccgacctacgtcctctggctgaacta
ctgaagaagtgcgaactcaaaattgtagatcagtacatgaatgagggtgactgtcagatt
ttggtccaccacatcgctcgagctctgaaggaagaattggctgagaagatgcgtctgtct
cctttcctgagcgtcattatggatgctcaaaatgacgacctttactcagatttggtggca
gtttatgtccagttcacaaccagtgacagttccccacaaatggagttcctgtccttagag
agagtgagcatacctaatgtggatggatacctccagcttctggatcgggccttcagcgtc
ttgggactcaggtttcaggacttgctggttgtaggtcttggagtggatggcaccaacatc
tcctcagggattagaggaagcctttacatatctgtccaaaagacttttccttggatcctc
tgtcttcccatattgatccaccggcctcatctggaggtactggacgccatcagtgggaag
gagctctcctgtcttgaggatctggaaaacaacctgaagcagctcctcagtttctaccgc
tactctccacgcatgatggccgagctgcgatccaccgctccgactctgtccgaggagacg
gcgttcctgggtgacatcagagccgtacgatggatcataggagaaccaaacgtcctgaat
gcactcatcaaggattacctggaggttttggcacacctgaaggagatcagcagccaaaca
cagagggctgacgctgcagcgatagccctcacactcctccagttcctcatggactatcag
tctgtgaaactcatctacttcttgctggacatcatagctgttctctcgcgactggccctc
accttccagggggagcacctgctggtgtcgcaggtggaagccaggctagaggaagcgatt
caggaaatcggccagttggtggattgtcctggtgaatatctgcaggagtttgaggaaaac
ttcagggaaagcttcaacggtgtcgctttgaagaaccttcgtgttgcagagtccaagttt
cagtccatccggaaaaagatctgcagcagaagtcaggggatcctgtcacaaaggctggac
ctgcagagccgctccttcaccaaagcctgcaaggtgctggacctggacagctggcccggc
aaccaagaagacctgaagacgttcggtgaggaggaaatccagatcattttcaaccacctg
gactccattccttctgcaggtcaggaaggccggatggagaaaaggagcaacctgctggtg
gaatggaaggagctgaaggtggactactttagcatgaacagcttcagagacgttctgatt
cacatctgcaggtacaagcagcgtttcccgctgctgaaccagattttgcaggtcgtcagg
gtcctgcccagctcaacggcctgctgcgataaaggcagaggcgctctgcagaggatctgt
aagaacaaccgttcccggctgaccctggagcagatgaacgacctgctcaccgtggccgtc
aacggaccgcccgtcgcaaactttgacgcaaagcgagcgttggacagctggtttgaggag
aagtctgggagcagccactctctttcgtccgaggtgttgaacaggacgtcggatgctgat
ccaaagtcaggcctgcacagcggggacatcaacgcagaatatctatag
DBGET
integrated database retrieval system
