Gambusia affinis (western mosquitofish): 122836207
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Entry
122836207 CDS
T07758
Name
(RefSeq) transcription initiation factor TFIID subunit 4-like
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
122836207
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
gaf03021
]
122836207
03036 Chromosome and associated proteins [BR:
gaf03036
]
122836207
Transcription machinery [BR:
gaf03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
122836207
Coactivators
SAGA/TFTC/STAGA complex
122836207
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
122836207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
Motif
Other DBs
NCBI-GeneID:
122836207
NCBI-ProteinID:
XP_043981925
LinkDB
All DBs
Position
LG08:5078557..5094434
Genome browser
AA seq
917 aa
AA seq
DB search
MAGAPDPLEDMLSTEVDEKAVSDLVGSLESQLGDRTLPAASDPDGKRDVAAVGRLSGKAG
SSEPQQGHQTAGSTREPGANQPLSGQTVPSSVTAGAIRNTGTGLQAVGSPSLTALPVPVT
LGSQPAASFPRAAVLAPSPVEAIRTSSPSLQPLNGSTGAGKVEGSPGAPPPGATLASQPG
LPAPQSPVGSPAVTLQGLPSPVISTAQNGLDPKGSASLSAAQVLNHNNPLMHTKMLVTST
PAPPAAQASIIQTQTGSSTPLAAAKPALNGLAQTVVRPPGAAVGAATSIQPQRPQLVTAT
TRPAAPQTALAVRPQQQTTIQLPPGFTIPPGMVLVRTETGQLVLVPQQALAQAQAKLQQS
QTVVTQRPATPLATSTIRVSTATTAPGAPQAVRLAAPAPTRIVQSPSTTSVQPLAVPAAV
KMPPPQKTSTVITAGVTPTAKPTPLPGSGATPPPAAPPGARVTVVSQEMQENVKKCKNFL
STLIKLASHNSPAPETSKNVKTLVQDLLDAKIEPEEFTSRLQAELKSSPQPYLIPFLKKS
LPALRQTLLNSQQSLTTAPPTTSAPPPVAPGSLTAAAIRPRLPVNATGTTVRLTPPITNT
AVGRATVQTIQTRSPVVLSQQIRHPATLLRGPTTMAGKAPVHLAAQANQKKPTDPGGGTF
RDDDDINDVASMAGVNLNEENARILATSSEIVGTKIRSCKDESFLPPGLLHRRILDSAKK
LGVTEVPLEVVNLISHATESRLRSLLEKASVIAQHRTDGAKDEGNLTYEQSSDVRSQLRF
FEALERMEKQRKDEQEREMLLKAAKSRARQEDPEQARLKQKAKEMQQQELAQMRQRDANL
TALAAIGPRKKRKLDSGGGASASSEVTSGSGSGSSASSSRQQLRQRITRVNLRDFILCLE
QDRSTARSLMLYKALLK
NT seq
2754 nt
NT seq
+upstream
nt +downstream
nt
atggcgggagccccagacccgctggaggacatgctgtccaccgaggtggacgagaaggcg
gtcagcgacctggtgggctccctggagtcccagctgggcgacagaaccctccccgcggct
tctgatccggacgggaagcgggacgtagcggcggtcggccgcctctcagggaaagcgggg
tcttcggagcctcaacaagggcaccaaaccgcggggtcgacccgggaaccgggcgccaac
cagcctctgtccgggcaaaccgttccctcctctgttaccgccggggcaataagaaacacc
ggaaccggtttgcaagcggtaggatcgccctctttgaccgctttacccgtaccggtaact
ctgggcagccagcccgctgctagcttcccccgggctgctgtcctggctcccagcccggtg
gaggcgatccggacctcttcccccagcttacagcccttgaacggcagcaccggagccggg
aaagtggagggctcacccggtgcccctccacccggcgcgaccctggcttcacaacccgga
ctccctgcccctcaatccccggtgggctcccctgctgtgaccctacaggggctccccagc
cccgtgatcagcaccgcccagaacggtttggacccgaagggttcagcctccctatcagcc
gctcaggtcctgaaccacaacaaccctctaatgcacaccaagatgctggtgaccagcacc
ccagctcctcctgcagcccaggcctccatcatccagacccagaccggatccagcacaccg
ctcgcagcagccaagcctgccctcaacgggttggctcagaccgtggtgaggccgcccggt
gctgctgttggggcggccacctccatccagccgcagagaccccagttggtgaccgccaca
acccggccggctgccccgcagaccgccctggctgtccggcctcagcagcagacaaccatc
cagctgccgcccggcttcaccatccctccaggtatggttctggtccggaccgagacgggt
cagctggtcttggttcctcagcaggctctggcccaggctcaggccaagctgcagcagagt
cagacggtggtcactcagagacccgcaacaccactggcgacatcgactatccgggtcagc
accgccaccacggcgcctggagccccccaggcggtccggctggctgcacccgctcccacc
agaatagtccagtctccttccaccacctctgttcagcccctcgcagttcctgctgccgtg
aagatgccgccgcctcagaaaacctccacggtgatcacggcaggggtgacgcccaccgcc
aagcccacaccgctacccggcagcggcgccacgccccctcccgctgccccgcctggcgcc
agggtcactgtggtgtcgcaggaaatgcaggaaaacgtgaagaaatgcaagaacttcttg
tctacgctcatcaagctggcgtcacataactccccagctcccgaaacgtccaagaacgtg
aagaccctcgttcaggacctgcttgacgcaaagatcgaacccgaggagttcacgtctcgg
ctgcaggctgagctgaagtcctccccacagccctacctcatccccttcctcaagaaaagc
ctccctgctctgcgtcagactctgctcaacagccagcagtctctgactacagctccgccc
accacctctgctccgcctccagtcgcccccggctccctcaccgcagcagccatcaggccg
cggctgcccgtcaacgccacgggaaccacggtccgcctgactccacccatcacaaacacg
gctgtgggcagagctacagtccagaccatccagacccgttctcctgtggtcctcagtcag
caaatcagacatccagccacactcttacggggtcccaccaccatggcaggtaaagctcct
gtccacctggcagctcaggccaatcagaagaaaccgaccgaccccgggggcgggaccttc
agagacgacgacgacatcaacgatgtggcttccatggctggggtcaaccttaacgaggaa
aacgcccgtatcctagcaaccagctcagagattgtcggcaccaagattcgatcctgtaaa
gacgaatcatttctgccgccgggccttctgcaccgccgcattctggactcggccaagaag
ctgggtgtgacggaggtgcctctggaggtggtgaacctcatctcacacgccaccgaatcc
agactgcgctcgctgctggaaaaggcctctgtgatcgctcagcaccgcacagacggcgca
aaggatgaaggaaacctcacctatgagcagtcgtcggacgttcgctcccagctgcggttc
ttcgaggcgctggagcggatggagaagcagcggaaagacgagcaggagcgcgagatgctg
ctgaaggccgccaagagtcgggcccggcaggaggatccggagcaggctcggctgaagcag
aaggctaaagagatgcagcagcaggaactggctcagatgcgacagcgagacgccaacctc
acggcgcttgccgccatcgggccgagaaagaaacgcaagttagactcaggaggcggtgct
tcagcaagcagtgaggtgacgtcgggatccggttccggctcctctgcctcctcatcccgg
cagcagctccggcagcggatcactcgggtcaacctcagggacttcatcctgtgtctggag
caggaccgcagcacagcccgctccctcatgctctacaaggccctcctgaagtga
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