Gambusia affinis (western mosquitofish): 122836253
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Entry
122836253 CDS
T07758
Name
(RefSeq) probable E3 ubiquitin-protein ligase HERC4 isoform X1
KO
K10614
E3 ubiquitin-protein ligase HERC3 [EC:
2.3.2.26
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122836253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122836253
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
122836253
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
HECT type E3
122836253
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
RCC1
RCC1_2
PsiE
Motif
Other DBs
NCBI-GeneID:
122836253
NCBI-ProteinID:
XP_043982008
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All DBs
Position
LG08:complement(17361683..17370793)
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AA seq
1002 aa
AA seq
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MFSWGEDSQRGFCLKGDPITDEGVHYLYFGHNVTDLSAGRSALAFLKSNGNAFILRTDES
KDGNRVRRKQKFVKCEERIEAVSCEDDVVMLLSEQGSVFCVDTTHTPYTPRTLDAFSSIP
VAQVACGSQHSVALTKEGQVYTWGLDSRGQLGLGKRHSGARSAQQVRSLLSIPVVQVSAG
GDQSFALSVSGGVFGWGRNDCGQLGLGDTKDMYTPACVHGLNLKKTGDICCGKDHTVVLT
KHGEVFTFGSGQYGQLGHNSLRNELRPRLVAELWGAKVIKIACGRYHTLVLTDSQKVYSF
GCQSQGQLGNREESNPSVPLPVRLPPVSDAVHSRIGTVFAGENCSFAACSSDEEVSINSD
NSAVSKATQPGLEVMVDKWTSKCDEKSWKKIRQEIHRTFLSASCLNKSFLEERKDKHLKT
SSKYHGLNLKLARRHFKQLVKTEDVWREVEAAVLHLLPLLDKTPVGVESLRIFLLLNELL
HVIQKYRKQQHSKLAEVVATAVTSLSRESLKVLGEWWSSLSSSTMKRFVSVWRQALCLIL
SDEDAPRSDGVRNLLQVLQYMYNVNSRVSESRRLPESDFYVIIDQEFLRGELQIWRLKSK
RRYVRDEPLVLCNFPIVMDLQTKTLVFEMNTNLTLKEFSFSILDQILMEMFLSLELGCYP
NSPLELHLNRASVLNDTFEQLAKADQKDYKRELVVFFDENYENDPVYVKDFFHEVFHELM
SAESEMFVFNDSKTLAWFSSGASQEDQRFHLFGVLCGLALYNKVIIYLPFPLVLFKKLLG
VRPSLDDLKEFSPTYGNGLQSILDTEEDPEEMYFTIPWSGADLDPENPDKQVTSENKREF
VDAFVNHVFNTSVEVVFYEFKRGFFQVCDRDLVKLFTPRELQETLVGKDFCDWEKLKQNT
VYEGEYNADHPIIQMFWEVFDELKEHQKNTFLWFVTGFERVPILGVDTIKMNIRVESMKD
DQYYPATHTCFSTLELPLYSTKDIMRATLTEALSNKRISQCV
NT seq
3009 nt
NT seq
+upstream
nt +downstream
nt
atgttttcttggggagaagactctcagcgaggcttctgtctgaaaggagaccccatcaca
gatgaaggagttcattatttatattttggtcataatgtcacggatctctcagcaggtcgc
agcgcgctggctttcctcaaaagtaatgggaatgcattcattttgcgcactgatgagagc
aaagatggaaacagagtaagaagaaaacaaaagtttgtgaaatgtgaggagaggattgag
gcggtgagctgtgaagacgatgtagtaatgctgctgtctgagcaaggctctgttttctgt
gtggacacgacccacaccccgtacacaccaaggacattggacgctttttctagcatacca
gttgcacaggttgcttgtgggagccagcattcagttgctctgacaaaagagggtcaggtg
tacacctggggcctggactccagaggtcagctcggactggggaagagacattcaggagcg
agatcagctcagcaagtccgatccttgttgtccatccccgtggttcaggtctctgcggga
ggagaccagagcttcgccctctccgtgtccggaggcgtgttcggctggggcagaaacgac
tgtggacagctcggactgggagacacaaaagacatgtatacaccagcttgtgttcatggt
ttgaatctgaagaaaacaggcgacatttgctgtggaaaggaccacaccgtcgttttgacc
aagcatggggaagtgttcacattcggttctggtcaatatggacaacttggacacaactcc
ttgcgaaatgaactccggcctcgacttgttgctgagctttggggggcaaaagttatcaag
attgcatgcgggaggtatcacacattagttttgacagacagccaaaaggtctactccttt
ggttgccaaagtcaaggtcagctgggaaacagagaagaaagcaacccatctgtgccgcta
cctgttcgtctacctccagtttcagatgcagttcattccagaattggaaccgtctttgct
ggagaaaactgttcatttgcggcctgctcttctgatgaggaagttagcataaattcagac
aatagcgcagtcagcaaagcaactcagcccggtttagaagttatggttgataaatggacg
tctaaatgtgatgaaaagtcatggaaaaagattaggcaggaaatccacaggacattttta
tctgcgtcctgtttgaacaaaagctttctagaagaaagaaaagataaacatttaaaaacc
tcgtcaaagtaccatgggctgaacctgaaactggctcgacggcatttcaagcaactggtc
aagacagaagatgtctggagagaggttgaagcagcagttctgcatttgcttcctctcctt
gataagaccccagtaggagtggagagtctgaggatcttcctgctcctcaatgagcttctt
catgtcatccagaagtacagaaagcagcagcacagcaagctggctgaggttgtcgctact
gcagtaacaagcctgtcaagggaaagcctcaaggttttaggtgagtggtggtcctcgctg
tcgtcatccaccatgaagagatttgtcagcgtgtggagacaagctctctgtctgatcttg
tccgatgaggatgctcctcgcagtgatggtgtcaggaacctgcttcaagttctccagtat
atgtacaatgttaacagcagggtttcggagtctcgaaggctgccagaaagtgatttttat
gtgataatcgatcaagagtttctccgtggagaactgcaaatctggcgtttaaaatcaaaa
cgcaggtatgtgcgtgacgagccacttgttctgtgcaacttcccgattgtgatggatctg
caaacaaagacactggtttttgagatgaatactaatctcaccctgaaggagttcagcttc
agtattttggaccagatcctcatggaaatgtttctgagtttagagttagggtgttaccct
aactctcccttggaactgcacctaaaccgagcgtctgtgttaaacgacacatttgaacag
ctggctaaggctgatcagaaagattacaagagagaacttgtggtgttttttgatgagaac
tatgaaaatgatcctgtctacgtgaaagactttttccatgaagtctttcatgagttgatg
tctgctgaatctgagatgttcgtgttcaatgactccaaaacactggcgtggttctcctct
ggagcttcacaggaggaccagcgtttccacctgtttggggttctgtgtggcctggctttg
tacaacaaggtgatcatttacttacccttcccactggtgctgttcaaaaagctgcttgga
gtgaggccttcactggacgatttgaaagaattcagtccaacttatggcaatggtctgcag
tccatcctggacacagaagaagacccagaggagatgtattttacaatcccatggagtgga
gctgatcttgatcctgaaaatcctgacaagcaagttaccagcgaaaacaagagagagttt
gttgacgcctttgtgaaccatgtcttcaacacgtcagtggaagttgtgttttacgagttc
aagcgaggtttcttccaagtttgtgaccgggatttggtgaaactttttacaccaagggaa
ctgcaagaaaccctagttggaaaggacttctgtgactgggaaaagctgaaacagaacacc
gtttatgagggcgagtacaatgccgaccaccccatcatacagatgttttgggaagttttc
gatgagctaaaggagcatcagaagaacacctttctgtggttcgtcactgggtttgaacgg
gtgccgatcctcggcgtggacacgataaagatgaatatcagagttgaatccatgaaggat
gaccagtattatcctgcgacccacacgtgtttctccacgctggaactgccgctgtattca
accaaagacatcatgcgagccacactaaccgaagctcttagcaacaaaaggatcagtcag
tgcgtttga
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