Gambusia affinis (western mosquitofish): 122836676
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Entry
122836676 CDS
T07758
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a isoform X1
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
gaf03000
]
122836676 (ssrp1a)
03036 Chromosome and associated proteins [BR:
gaf03036
]
122836676 (ssrp1a)
Transcription factors [BR:
gaf03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
122836676 (ssrp1a)
Chromosome and associated proteins [BR:
gaf03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
122836676 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
HMG_box_2
HMG_WDHD1
SSRP1_C
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
122836676
NCBI-ProteinID:
XP_043982351
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Position
LG09:15534364..15546552
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AA seq
709 aa
AA seq
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MGDMLEFNDIYQEVKGSWNDGRLRFSKQNVVYKSNKTGKVDSIPAGELNQAQWRRVCLGH
GIKLGTSTGHIYKYDGFRDTDFEKLSEFFKLNYKMELSEKDMSVKGWNWGTAKFSGPLLS
FDINDHTAFEIPLSNVSQCATGKNEVTLEFHQNDDTEVSLMEVRFYVPPNQTDERQDPVE
AFAQNVLTKADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKEEDINLTLNMSEEDVEKRFE
GKLSKNMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLNIKNRGFKEKKGMKGNINEYSDSDEDQHDAYLERMKAEGKIREEGNDSDDSDGSGS
DESFNPGEEDEEIAEEYDSNASASDSSDEGDDSEDESAKKKAKKTKVVKEKKERKPRKEK
KQKDKAGPKRPMSAYMLWLNSSRERIKSENPGISITEISKKAGEMWRQLNKDEKEEWETK
AGEAKRQYDKLKKEYKESGGGPTSSPRKEKRKSGGKKDEKRKSSSGEKEKERGGNDSFKS
REFIETSDDSSSDSDHKSKSKKKRKKKESEEEEEEEAVSTPASSEEESD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgggggacatgctagagttcaacgatatctatcaggaggtcaaaggctcatggaatgac
ggacggctgcgtttcagcaaacagaatgtggtttataagagcaacaagactgggaaggtg
gacagcatcccggccggagagctcaaccaggcgcagtggaggcgtgtgtgtttaggtcac
ggcatcaaactcggcaccagcacggggcacatctacaaatatgacggctttagggacacg
gactttgagaagctctcagagtttttcaagttgaactacaagatggagttgtcagagaag
gacatgtctgtgaagggctggaactgggggacggccaagttctcaggtccgctgctgtcg
tttgacatcaacgaccacacagcgttcgagatccctctgtccaacgtttcccagtgtgcc
actgggaagaacgaagtcacactggagttccaccagaacgacgacaccgaggtttctctc
atggaggtccgattctacgtcccgcccaaccagactgacgaacggcaagaccctgtggag
gcgttcgcccagaacgttttgacgaaggctgatgtcattcaggccacaggagacgctgtt
tgtatcttcaaggagcttcagtgtctcacgcccagaggaagatatgatattcggatctac
ccgacgttcctccacttgcacggtaaaacgttcgactacaagattccctacaccaccgtg
ctgcgactcttcctgctgcctcacaaggatcagcgtcagatgttctttgtgatcagtctg
gatcctcccatcaagcagggtcagacgcgttatcacttcctcattctgcttttttctaag
gaagaggatatcaacctaaccctcaacatgagcgaggaggatgtggaaaaacgcttcgag
ggcaaactcagtaaaaacatgtctggctctctttatgagatggtcagcagggtgatgaag
gccctggtcaaccgcaaaatcactgtgcctggaaacttccaaggccactctggcgctcag
tgcatcacctgctcctacaaggcgtcttcaggcctcctctaccctctggagaggggcttc
atctacgtccacaagcccccggttcacctgcgctttgaggaaatctcctgcgtcaacttc
gccagaggcaccaccacgacgcggtccttcgactttgagatcgagaccaagcaaggaaac
cagtacacgttcagcagcatcgagagggaggaatatggcaaactgtttgactttgttaat
gccaagaagctcaacatcaagaacagaggcttcaaagagaagaagggcatgaagggcaac
atcaacgagtacagcgactctgacgaagaccagcacgatgcctacctggagaggatgaag
gccgagggaaagatcagggaggagggcaacgacagcgacgattcagacggaagtggaagc
gacgagtctttcaaccctggagaggaagatgaggaaattgcagaagagtatgacagcaat
gcttctgccagcgacagcagcgacgaaggagatgatagcgaagacgagagcgcaaagaaa
aaggccaaaaaaactaaagttgtgaaagagaaaaaggaaagaaaaccacgcaaagagaag
aagcagaaggacaaagctggccccaagaggccgatgagcgcctacatgctgtggctgaac
tccagccgcgagcgcatcaagtcagagaaccccggcatctccatcacagagatatccaag
aaggccggagagatgtggagacagctgaacaaagacgagaaggaggaatgggaaacaaaa
gcaggggaggcaaagaggcaatatgacaaattaaagaaggaatacaaagagagcggagga
ggaccgacctccagtcccaggaaagagaagagaaaatctggtggaaaaaaggatgagaag
agaaagtccagcagtggagagaaagaaaaggaacgaggaggaaacgacagtttcaagagc
cgagagttcattgagaccagcgacgacagttcctccgactccgaccacaagagcaaatcc
aagaagaagaggaagaagaaggagtcagaggaggaagaggaggaggaagctgtatccact
cctgccagctcagaggaagagtctgactga
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