Gambusia affinis (western mosquitofish): 122836688
Help
Entry
122836688 CDS
T07758
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like isoform X1
KO
K12597
protein AIR1/2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
122836688
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122836688
03016 Transfer RNA biogenesis [BR:
gaf03016
]
122836688
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
122836688
Transfer RNA biogenesis [BR:
gaf03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
122836688
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Dmrt1
Zn_ribbon_2
Motif
Other DBs
NCBI-GeneID:
122836688
NCBI-ProteinID:
XP_043982381
LinkDB
All DBs
Position
LG09:15658992..15664645
Genome browser
AA seq
488 aa
AA seq
DB search
MYTNLLTGNYICLCFVVGMRFELTEDSITSESGEETFSGYMKHEKSAKLFSQLSRDSSPP
LLLAFSITSGKIRQDTSSISSAGSQEQLEEDSDQPIEEWMILDGEEQAEDPSIQLNLGCW
ESSEEDVEDEGMTDKKVKLGGDTWAVSDKDKYGGTQSLGSRYFMAGRSSPCNICNRMGHV
ARRCYFHKQKSPTCVLCGVQGHVQRDCPSRPCSTCGLPSHALNPCRVPPVWKQHCQRCGV
TGHMFDACPDLWRQYHLTVKLGVPFRPRNAFNLKHKSHHAHCYNCSKRGHFGHECTKRRM
ISGTFPSLPYVCYYDTLDDILHQNAPTLTPAKDLRSAGPLTSQQECCKDTPLVQGSSRTK
LEPGAHPGRRKTWPERRRERREVKRLRREAQAKREGGFLGRHFCTIDDAVCPADPYRPVL
RSHRESKTSQENKKREEKAGKKSRKSREAEKWRKRGGIKRRDLHPHGDIDIGSENLLSPK
QRVRHRRR
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaaacttgcttactgggaactatatttgtctctgctttgtggtaggaatgcgt
tttgagttaacagaggactccatcacttcagagagtggagaagagacgttttctggttac
atgaaacatgagaaaagcgccaagctgttttcacagctcagcagagacagctctcctccg
ctgctccttgctttctccatcacctctggaaagattaggcaggacaccagcagtatctcc
agtgctggttcacaggagcagctggaagaggacagcgatcagcctattgaggagtggatg
atcctggatggagaggagcaggcggaggacccaagcatccagctcaatctcggctgctgg
gagagctctgaggaggatgttgaagatgaaggtatgacagacaaaaaagtgaaattagga
ggagatacctgggctgtctcagacaaagacaagtatggaggcactcaatctctgggcagt
cgctatttcatggctggtcgttcatccccctgtaacatctgcaacaggatgggacacgtt
gccagacgttgctactttcacaagcagaaaagtcccacttgtgttctttgtggcgtccag
ggccacgtccaaagagactgtccgagccggccctgttccacttgtgggctcccctcgcat
gccctcaacccctgcagagtgcctccagtgtggaagcagcactgccagcgctgcggcgtg
actggccacatgtttgatgcctgcccagatttatggcgacaataccacctgactgtcaag
ttaggggttcctttcagacccagaaatgccttcaatctcaaacataagagccaccatgct
cattgctacaactgctcaaaaaggggacactttggtcatgagtgcacaaagaggaggatg
attagtggcacttttccctcactgccttatgtttgttattatgacactctggatgacatt
ctccaccagaatgccccgacgctcacaccagccaaagaccttaggagtgctggaccccta
acttcacagcaggaatgttgcaaagatacgccattggtgcagggaagcagcaggacaaag
ctggagcctggcgctcatcctggaaggaggaagacctggcctgaaaggcgcagagagagg
cgtgaagtgaagcgactgaggagggaggcccaggctaagcgggaaggaggatttctgggg
aggcatttttgcaccattgatgatgcagtttgccccgctgacccctatagacccgttcta
cgcagtcatagagagtccaaaacctctcaggagaacaaaaagagagaggagaaagctggg
aagaagagcaggaaaagcagagaggcagagaagtggagaaaaagaggggggataaaacgc
agggatttgcatccacatggtgacattgacattggaagtgaaaaccttctgtctccaaag
cagagagtgcgccaccgaaggagatga
DBGET
integrated database retrieval system
