Gambusia affinis (western mosquitofish): 122836714
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Entry
122836714 CDS
T07758
Name
(RefSeq) LIM and calponin homology domains-containing protein 1-like isoform X1
KO
K24422
LIM and calponin homology domains-containing protein 1
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
122836714
Domain-containing proteins not elsewhere classified [BR:
gaf04990
]
LIM domain-containing proteins
Other lim domain-containing proteins
122836714
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DUF4757
CH
LIM
Motif
Other DBs
NCBI-GeneID:
122836714
NCBI-ProteinID:
XP_043982424
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All DBs
Position
LG09:26855594..26924245
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AA seq
1116 aa
AA seq
DB search
MASPVADLGQSHQHHPVSESASDSAFLEAQKWIEAATGRCFGDKDFRGGLENGILLCELL
SSIRPGLVKKINRLPTPIAGLDNLSVFLRGCEELGLKGSQLFDPGDLQDTSTRPAAKGSD
CSRRLKNVLITIYWLGRAANSCTSYNGPTLDLKEFEGLLSQMRKEAEAAESPQRSIRDSG
YIDCWDSERSDSLSPPRHGREDSFDSLDSFGSRSQQTPSPDVLVPRGSSDGRGSDSESDG
TPNRKMPDLHKDDMLARRTSVTELRTAMPFNQYLPNRSNQSGYVPAPLRKKKNEKEETGQ
KSWSTATSPVGGGRPCRSLSMIDMRGENEGILQPHSHIRHELMHNQYNRIKEDENHWQED
LARWKSRRRSVSQDLIKKEEERKMMQQLMSGGSCISQRRKSIKTYREIVEDKERREEELR
EAYQKARTPEEASAILQRYAQRFSISEAVLERLQLPKLLDRSMSADPSFPTSPFSLSLSS
SPTTPDPFDEAPDGPLRYLRQQSAPAPRFTSTLEAQIEEFPKDSSSHQRPQIRSRSSEPP
STRALSPKPVPLLTPKPYFQPRPSADEKWNSKADGLLRVNGDIRNDPSSMKSESKERDSP
ALFQASPDAPHSDASPALSSPTSPERGSPVLTKTSGKQSNMEADSVNEGSPTPTRPTSLP
EELKQPVDSFVETGGQKDSAQQEVKSTTAAQKAPPADSKSEKTEQSIGNILQILPTEINT
PNDPAVTSTVRVSSCQESFEGVETTSSPAAPVSLGHNPLRETSSEFEISVKSPQSSNNPK
SRWEFFAPPEAAEKDQHGNVSVPVLAKARRGDRWSWDPDEERKRQERWQQEQERMLQEKY
QREQEKLKEEWEKAQREVAEEERKYHEEERRILEETVMPLTPRSSALPSPSRGGLSSTSE
PQDTIVRSLADWERKQELLERQSRGSTESAEWKRKENDRTSDISTADDSMKTGRSLVSQN
SSQAERLGHSVHNGQKLPPTSPKCSTPPKKQSGPDSTRTSRPAGERRCGPTDNNVRSSSK
PLAACPSAPDTFPPPSNRSVSGKKLCSSCSQPLGKGAAMIIETLSLYFHIHCFKCGVCKG
QLGDTTTGTDVRIRNGLLNCNQCYIRSRSAGQPTTL
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggccagtccggttgcagaccttggacagtctcatcagcatcaccctgtgtcggagtcg
gcctccgactctgcgtttctggaggctcagaaatggatcgaggctgcgactggacggtgc
tttggtgacaaggatttccgaggaggattggagaacgggattctgctgtgcgagttactg
agctccattagacctggcttggtaaagaaaattaaccgactgccaacaccaatagctggc
ctggacaacctgagtgtttttctgcgaggttgtgaggagttaggacttaaaggctcgcag
ctgtttgacccaggagacctgcaggacacatctacacgtcctgctgccaagggaagcgac
tgcagccgaaggctcaagaatgttttaatcaccatctactggctcggccgtgctgccaac
agctgcacctcctacaacgggcccacgctggacctaaaagagtttgagggcttgctgtca
caaatgcgaaaggaggcagaggcggcagaaagtcctcaacgcagcattcgggacagtggc
tacatcgactgctgggactctgaacgcagtgactcgctctccccgccacgccacggacgc
gaagattcattcgacagcctggactccttcggttcgcgctcgcagcagactccgtcgccg
gatgtcctggtcccacgcggcagcagtgatggccgcggcagtgactcggagtccgacggc
acccctaacaggaagatgccggacctccacaaggatgacatgttggcgcggcggacatca
gtcactgagctgcgcaccgccatgcctttcaaccagtacctccccaacaggagcaatcag
agtggatacgtgccagcaccgcttcgcaagaagaagaacgaaaaggaggagacaggccaa
aagagctggagtactgctacatcacctgtagggggaggcagaccctgtaggagtttgagt
atgatcgacatgcgtggtgaaaacgagggcatcctgcagccgcacagtcacattcgtcat
gagctgatgcacaaccagtacaacagaataaaagaagatgagaatcactggcaggaagac
ctggcccgatggaaaagtaggaggaggagtgtctctcaggatctgatcaaaaaagaggag
gagaggaaaatgatgcagcaactgatgtcaggaggcagctgcatctctcaaagaagaaaa
agcatcaaaacctacagagaaattgtggaggacaaggagcggcgtgaggaggagctgcgg
gaggcgtaccagaaagccagaactccagaggaggcatcggccatcctccagcgctacgcc
cagcgtttctccatcagcgaggccgtcctggaacgcctgcagctgcccaagcttctggac
cgcagcatgtcggccgacccctcctttcccacctcgcccttctccctctcactctcctcc
tcccccacgactccagaccctttcgacgaggcgcccgacgggccactgaggtacctgcgg
cagcaatctgcgccggcgccacggtttacgtccacactggaggcgcagattgaagagttt
cccaaagactcgagctcacaccagcggcctcagatccgatctcgctcttctgaaccaccg
tccacccgggccctgtcacctaaaccggtgcctttgctgacaccaaagccttactttcag
ccccgaccgtcggctgatgaaaaatggaatagcaaggcggacggtttgctacgagtaaac
ggcgacatcagaaatgatcccagttccatgaagtcggagagcaaagaaagggactcccct
gctctgttccaggcatctccagatgccccccattcagacgcctcacccgctctcagttcg
cccacctcccccgaaagaggaagtccagtgttaacaaaaaccagcggcaaacagagcaac
atggaggcagactcagtcaatgagggttcgcccactcccactcgacccacttctcttccg
gaggagctaaagcagccagtggacagctttgtggagacgggaggccagaaagattctgct
caacaggaagtaaagtcaactactgcagctcagaaagcgccacctgcagattctaaatcg
gagaagactgaacagtccatagggaacatattgcagattctcccaactgagataaacaca
ccaaacgacccggccgtaacatcaacggtcagagtttcctcctgtcaggagtcttttgag
ggagtggagacgacatcgagtccagctgcccccgtatcacttggacataaccccctgagg
gaaacgtcatcagagtttgaaatcagtgtcaagtccccacagtcctccaacaaccctaaa
tcacgctgggagttcttcgctccaccagaagcagcagagaaagatcaacatggaaatgtg
tcagtcccggtgttggccaaggccaggcggggagaccgctggtcttgggacccggatgag
gagcgaaagcgtcaggaaaggtggcagcaagagcaggagcgcatgctgcaggagaaatac
cagcgtgagcaggagaaactgaaggaggagtgggaaaaagcacagagggaggtggcggag
gaggagaggaagtatcatgaggaggagcgtcggatactggaggagactgtgatgcctctg
acaccccgctcctcagctctgccctcccccagcagaggggggctctcctccacctccgag
ccacaggacacgattgtgcgttcgctggcagattgggaacgaaaacaagagctactggag
agacagtctagaggaagtacagagagtgcagagtggaaaaggaaagaaaatgacagaacc
agtgacatcagcactgctgacgacagcatgaagaccggcagaagcttggtgagtcagaac
agcagtcaggcagagagacttggtcacagtgttcacaatggccaaaagcttcctccgacg
tcccccaaatgttcaactccacccaagaagcaatctgggcctgacagcaccagaaccagc
cggcctgctggagaacgaaggtgcggacccactgataacaatgtaagaagctcatcaaag
cccctcgcagcatgtccatcagcaccagacacatttcccccaccgtccaacaggtctgtc
agtgggaagaagctgtgttccagctgtagtcagcctctggggaagggagcagccatgatc
atagagactctcagcctctacttccacatccactgctttaagtgtggggtgtgtaaagga
cagttaggtgacacaaccacagggacagacgtccggatcagaaatggactcctcaattgc
aaccaatgttacattcgttcccgctcggccggacagccgaccacattgtga
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