Gambusia affinis (western mosquitofish): 122836768
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Entry
122836768 CDS
T07758
Symbol
tbc1d2
Name
(RefSeq) TBC1 domain family member 2A isoform X1
KO
K20165
TBC1 domain family member 2A
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122836768 (tbc1d2)
Membrane trafficking [BR:
gaf04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
122836768 (tbc1d2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH
PH_11
PH_3
PH_8
PH_alsin
HEPN_Cthe2314
Motif
Other DBs
NCBI-GeneID:
122836768
NCBI-ProteinID:
XP_043982550
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All DBs
Position
LG09:complement(29989295..30003443)
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AA seq
1032 aa
AA seq
DB search
MDGGSPASDSLPVPTDPVRMGPDSQNQEAVRSGPGCLSGSPEPTEPPSSPQSTRPEPPGS
EQTEPGGSAGLESAPETSSQPVLQNPEGSTDQAEEEPGSDPPEVLTAGPEEPGVHQNPQC
SEELHQNPGEVLSAEEGGFAASRLGRPGRTECLDLQNRQAPPPSGQVWPRPLGTAGEPRL
CGFLQKQAGPLRAWKRRWFSYEQNQNQLFYFRSPQDVAPLGRIRLSGATFTCPPITESGT
FHIQTPERTFILKAVSQELMLYWLQQLQMKRWQHRDTSAGPDRTNNNNNNLTDDFLPRQH
GPVGLVGEAAAVAPAQCSTLSSVSIKHPLIQIQNSVHSLRKRTSQNSSQSSVFYADVLPW
TGTGPEDGGACADNPAGQRSASRSLSWRSKSRVSSSVSVPCGDAASSERTSRLQQEKQML
MEEVKAQKELVWILHKALEASQLEKRSCSEFLAAQDERRRLELLRHGERLAADLRARLDS
AKMEAEALRRRLDDRDAQLAELQEEVRLLEEKNAAKQQVIMKLTDQVTSCLLDPGHPDSS
GSVQNQNHQNHKELQQQMENLKDDLVAYQTQNRFLNSEIHQLTKLWRKSSEQERSLMVKC
AYLEATNCQMESRYLGVLRSLQEAKALAPEQQEAVQRLIQDALGGEAKGVVKLSADRDHD
EYGFKIVPDYEVEDMKLLAKIQALEIRGLNLLQQDSMERPLLARWAQYLAGHCEDDMCPS
PELKALLRAGVPQQYRQRVWRWLVRTRTRTVWERHPQRYQQLCEKSRMSPHPACRQIQLD
LHRTLTTNQNFSSPSSPTLQQLSRVLLAFSWQNPAVGYCQGLNRLAAVALLVLQSEEDAF
WCLVALVDTIMPQDYYTKNLLASQADQRVLKDFMAEKLPRLAAHLEGHGVDVSLVTFNWF
LVVFVESLPSDILLPLWDAFLYEGSKVIFRYTLALFKYKEDDLLKIHDSVEIYQYLRFFT
KTVTDSRKLAAIAFCDMNPFPRRLLRNRRALHLERLQGELQELEEQQKEFVTESVERKDK
ELDPASEDDDEL
NT seq
3099 nt
NT seq
+upstream
nt +downstream
nt
atggatggaggaagtcccgcctccgactcacttcctgttcccaccgacccggtccggatg
ggtccagactctcagaaccaggaggcagttcggagtggacccggctgcctgtccgggtca
ccagaaccaacagaacctccttcaagcccacaatcaaccagaccagaacctcctggttct
gagcagacggaaccaggtggttctgcaggactagaatcagcgccagaaacaagttcccag
ccggttctccagaacccagaaggctctacagatcaggctgaggaggaacccggttctgat
ccgcctgaggttctgactgcagggccagaggaacctggagttcatcagaacccccagtgt
tcagaagaactccatcagaaccctggtgaagttctgtcggcagaggaaggcggttttgct
gcgtcccgtttgggtcgacccggccgtacggagtgtctggacctccagaaccgtcaggcc
ccgccccccagcggccaggtgtggccccgccccctcggcactgcaggtgagcccaggctg
tgcggcttcctgcagaagcaggcggggcccctgagagcctggaagcggcgctggttcagc
tacgaacagaaccagaaccagctgttctacttccgctcaccgcaggacgtggcgccgctg
ggccggatccgactcagcggcgccaccttcacctgtccgccgatcaccgagagcggcacc
ttccacatccagacacccgaacgcaccttcatcctcaaggcggtgagtcaggagctgatg
ctctactggctgcagcagctgcagatgaagcgctggcagcaccgtgacacgtcagctgga
ccggaccggaccaacaacaacaacaacaacctgacagacgacttcctgccaaggcagcat
ggtcctgtgggcctggtgggggaggcggcggccgtcgctccggcccagtgctcgacgctc
tccagcgtctccatcaaacacccgctcatccagatccagaactcggtccacagtctgagg
aagagaacgtctcagaactccagtcagagctcagtgttctacgccgatgttctgccctgg
accggaaccgggccggaggacggcggcgcctgcgcagataaccccgcaggtcagaggtcg
gcgtctcggtccctcagctggaggtccaagtcccgggtctcgtcctctgtgtcggtcccc
tgcggggacgcggcgtcctcggagcggacgtcccgcctgcagcaggagaagcaaatgctg
atggaggaggtcaaggctcagaaggagctggtctggatcctccacaaggcgctggaggcg
tcgcagctggagaagcgcagctgcagcgagttcctggcggcgcaggacgagcggcggcgc
ctagagctgctgcggcacggcgagcggctggcggccgacctgagggcccggctggacagc
gccaagatggaggccgaggcgttgaggcgtcgcctggacgacagagacgctcagctggcc
gagctgcaggaagaggtcaggctgctggaggagaagaacgccgccaagcagcaggtgatc
atgaagctgactgatcaggtgacctcctgcctgttggaccctgggcacccggactcctct
gggtccgtccagaaccagaaccatcagaaccacaaggagctccagcagcagatggagaat
ctcaaggacgacttggtggcatatcaaacccagaaccgtttcctgaactcagagattcac
cagctgaccaaactgtggaggaaaagctccgagcaggagaggagcctgatggtgaagtgt
gcctacctggaggccaccaactgccagatggagagccgttacctgggcgtcctgcggagc
ctgcaggaggccaaagctctggctccggagcagcaggaggccgtgcagcggctgatccag
gacgccctgggaggagaggcgaagggcgtcgtgaagctgagtgcggacagggatcacgac
gagtacggctttaagatcgtccccgactacgaggtggaggacatgaagctgctggccaag
atccaggcgctggagatccgtggcctcaacctgctgcagcaggacagcatggagcgcccc
ctgctggcccgctgggcgcagtacctggccggccactgtgaggacgacatgtgtccgtct
ccagagctcaaggctctgctgcgcgccggcgtccctcagcagtatcggcagagagtgtgg
cgctggctggtccggaccagaaccagaaccgtctgggagcgccacccccagcggtaccag
cagctgtgcgagaagagccggatgtcgccgcacccggcctgcaggcagatccagctggac
ctgcacagaaccctgaccaccaatcagaacttctcctcgccctcaagccccaccctccag
cagctgagccgcgtcctgctggcgttctcctggcagaacccggcggtcggctactgccag
gggcttaacaggctggctgctgtcgccctgctggtactgcagagtgaggaagacgccttc
tggtgcctggtggcgctggtggacaccatcatgcctcaggactactacaccaagaacctg
ctggcctctcaggccgaccaacgtgtcctgaaggacttcatggcagagaaactcccccgg
ctggcagcgcacctggagggtcacggggtcgacgtgtcgctggtcaccttcaactggttc
ctggtcgtcttcgtggagagtctgcccagtgacatcctgctgccgctgtgggacgccttc
ctgtacgagggctccaaggtgatcttcaggtacactctggctctgttcaagtacaaagaa
gacgacctgctgaagatccacgacagcgtggagatctaccaatacctgcgcttcttcacc
aagaccgtcaccgacagcaggaagttggcggccattgctttctgcgacatgaacccgttc
ccgcggcgcctgctgaggaaccggcgcgcgctgcacctggagcgcctgcagggggagctg
caggagctggaggagcagcagaaggagtttgtgacagagagcgtggagcggaaagacaag
gagctggacccggccagcgaagacgatgacgagctttaa
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