Gambusia affinis (western mosquitofish): 122836978
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Entry
122836978 CDS
T07758
Symbol
atg2a
Name
(RefSeq) autophagy-related protein 2 homolog A isoform X1
KO
K17906
autophagy-related protein 2
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04136
Autophagy - other
gaf04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122836978 (atg2a)
04136 Autophagy - other
122836978 (atg2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122836978 (atg2a)
03029 Mitochondrial biogenesis [BR:
gaf03029
]
122836978 (atg2a)
Membrane trafficking [BR:
gaf04131
]
Autophagy
Autophagosome formation proteins
Atg18-Atg2 complex
122836978 (atg2a)
Mitochondrial biogenesis [BR:
gaf03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
122836978 (atg2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG2_CAD
VPS13_N
Motif
Other DBs
NCBI-GeneID:
122836978
NCBI-ProteinID:
XP_043982946
LinkDB
All DBs
Position
LG09:17453855..17480423
Genome browser
AA seq
2013 aa
AA seq
DB search
MSRWLFPWSGSIKKRACRYLLQHYLGHFLQERLSLDQLSLDLYNGSGDITNINLDVWAVN
ELLESLGAPLEMVDGFVGSIQVTIPWQALLTDHCTLEVSGLQITCRPKYRTSGNWESQGW
SSSMTSSMQLAQECLKDPPEASEEPPAPLEGLEMFAQTIETVLRRIKVTFIDTIVRIEHQ
PLDLKTGVALEVHIQRLEYFDEAVKDPSSQTAVPVDIHQPPAFLHKILQLTEVQLLYDII
GAVQGPFGEVHLNSATASEGEEEDEEEDEERGEKAKPLKSTACPPSQPLLIGRCSGSIET
TVKIKQNDMLPGPKLELDGRGGCVHMLLSPDQITHLADLLAALCIDIEPEQKCGGVNSRP
LDSEDLRLIEEDLSKQLGSSPKDREWENEPHLEPYITSLENGEMFYSMGPAAMSSSVAST
RSGSELSDSDMESSTHSLSSLTHPAALTAQGLASCTRRYPVAGCLSSLPHTSRIRGRSHS
GQAEQLKPEALLRLTLGGLTLTMLQEDPPSDGASSLAQVSQVFFRGLLSFKENMLANKNF
NHLRKCFAAACPLSNLRLTGAAVQVTCETRSGRRHCRAVTSDLSFSRLELLECLWQDGKP
QYCELLQFQKAGLFTVGAAARPCAQLHYSLTEKHLRKGKQRVLRRDSVVRVELAELSAEL
DLDILSRLGSLSKAFSHCPSQNCGQGLIQTQSVELCSSFTLLSPNAVLRLRFPIPDLRPP
PLRRPPSQRAVREETLVLELMELELKHQEAPDLQSQQPASGQQWGPCLTQLLEASFTDMH
GSYEGWEGGSFPCIRVKKNHDSMPRISVRVRGGEAQGPAAGLSGMNLGLMKDLGSTVFES
HCEFNEKSSSPFSSNRTMFETEEMVIPADPQEMLQFQEQCVAQCRCAVDISFPLAYILLP
SKQAFQSIYNRINNDLLMWEPPPPPLPSAPGPDQSRRPFDEFQLCKSAFRLDSDSEEDEP
QFYLASDSSGRMQQSVPLPSNNLSLLSLTVIIGKGRLQARTDRKEDETQGELVLDLEGGK
IFSVAQHQNDPNLNFLTLESKRVELYHRAVVKDTSVPERLEMPSFTPPTQLEPTIYPTEL
GVSSVRGREEEPQMLSTAIKITLDLQRNVKEFLVALQLQGATMRHYMTQSNQSWHEQLID
FLDVVDDPILGYTAPAVITILHTHLASCAVDYRPLYLPLRVLFTAESFSLSSNIIVDTAT
FHLRFILDDSALYLSDKCETDTVDLRKDYVCVLDIDLLELAITTWKGSDAGKLSQPLFEL
RCSNNVVHLYTCADSCAALVNLLQYLVAQGDLHPPPRHTSPTEIAGQKLLLSESPASLPP
CPPAETAEINQYDLADALIDTERSHRDSLDPESPSVPRGSPVSVYLFPGEGTKQSPSVLQ
REESELDGLVATAMEAQPDMILDDGSEGSTDNDDFCILEAPGMGIPPRDGEPVVTVLCEG
PIKVKDSHFSRPRGSSDLLRAPSGFPVPHTRVVLKEISVVWHLYGGKDFGGKPMSVHAQN
SNRGRSVPVGVRGSPSRSVASARPQNSWRWAGGSGRQHSLLMEIQLTKVSFQHESYPVAV
AGQDGDGSLTSGVGPSGEHPLSRQVFIVQELEIRDRLASSQLNKFLYLYTSESMPRRAHS
NMLTVKALQVLPESGLGGPECCLRVSLLPLRLNIDQDALFFLKDFFSNLASAVNPYMPVD
PAAEVTVKVDPSQKGSEEAGADAGLGPDLTASVETTYSEQSSSSAGSSSSSSEQPIYFRE
FRFTSEVPIWLDYHGKHVVIEQGTFAGILIGLAQLNCSELKLKRLCCRHGLLGVDKVIQY
AITEWLTDIRKNQLPGILGGVGPMHSVVQLFHGVRDLFWLPIEQYRKDGRIIRGLQRGAA
SFGTSTASAALELSNRLVQAIQATAETVYDILSPTPPLNRFAITEGRAPASRPRRAAQPA
DLREGVAKAYDTVREGVIDTAQTLCEVASRGHEQKGLPGAVGGVLRQIPPTVVRPLIVAS
EATSNLLGGMRNQIKPDARKEDFLKWRTEDAQE
NT seq
6042 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgctggcttttcccctggtcgggctcaatcaagaagcgggcctgtcggtacctt
ttgcagcactacctcggtcactttctgcaggagcggctgagcctagaccagctcagtttg
gacctgtacaacggcagcggtgacatcacgaatatcaacctagatgtgtgggcggtcaat
gagctcctggagtctctcggggctcccctggagatggtggatggctttgtgggaagcatc
caggtgaccatcccctggcaggctctcctgactgatcattgcaccttagaagtttctggt
cttcagataacatgtcgacccaagtaccgaaccagcggaaactgggagtcacagggatgg
tcatccagcatgacctccagcatgcagctggctcaggagtgcctaaaggaccctccagag
gcgtccgaggagccgcctgccccactggagggacttgagatgtttgcacaaactattgag
acagttctccgtcgcatcaaagtcacatttatagacaccatcgtccgcattgagcaccaa
cccctggacctgaaaacaggtgttgccttagaagtgcacatacaacgcctggagtacttt
gatgaagccgtgaaagatccatccagccagactgccgtgcctgtcgacattcaccagcca
cccgcctttctgcacaagatcctccagctgacggaggttcagctgctgtacgacatcatc
ggtgctgttcagggtccttttggggaagtgcatcttaactcagccacagccagtgaagga
gaggaggaggatgaggaggaggatgaggagagaggggaaaaagccaaacccttgaaaagc
actgcctgccccccatctcagccgctgctcatagggcgatgctctggctctattgaaacc
acagtgaagatcaagcagaacgacatgctgcctggaccaaagttggagttggacgggaga
gggggatgtgtccacatgctgctgtctccagatcaaattacccatctagcagaccttctg
gcagccctgtgcatcgacattgagccggagcagaagtgcggtggagtgaacagtcgcccg
ttagactcagaggacctgcgactgatcgaggaggaccttagcaagcagctgggatccagt
cctaaagacagggagtgggagaacgagccccacctggagccctacatcaccagcctggag
aacggagaaatgttttactccatgggccctgcagcgatgagcagcagcgttgcgtccact
cgctctggcagcgagctgtcggacagcgacatggagtcctccacacacagtctgagcagc
ctgacgcacccggcagctctgacagcacagggcttggcaagctgtactagaagatatcct
gtagcaggatgcttatccagcctgcctcataccagcaggatcagagggcgctcacacagt
ggccaggcagagcagctgaaacccgaagccttgctgcgcctgaccctcggtggactcact
ctgaccatgctgcaggaggacccgccctctgatggagcctcgtcattagctcaggtgtct
caggtgttcttccgagggctgctttcattcaaggagaacatgttggccaataaaaacttc
aaccatctgagaaaatgcttcgccgcagcctgtccactctccaatctcaggttgaccgga
gcagcagtgcaggtgacatgtgagacgcgaagcgggagacgccactgtcgggccgtgact
tcagacctttctttcagcagactggaactgttggagtgcctctggcaggatggaaaacct
cagtactgtgagttacttcagttccagaaagctggactgtttacagttggagctgcagcc
agaccatgtgcccagctacactacagcctcactgaaaaacacctgcgaaaaggtaagcag
cgtgtgttgcggcgggacagcgtggtacgggtagagctggcagaactgagcgccgagctg
gacctggacatcctcagccgcctggggagcctcagcaaagccttcagccactgtccgagc
cagaactgtggacaaggactcatacagacccagagcgtcgaactttgctcgtccttcacc
ctcctgtcccccaacgccgtgctcagacttcgcttccccatcccagacctgcggcctccc
ccactgcgtcggccaccatcccagagggcagtgagagaggagacgttggtgctggagctg
atggagctggagctgaagcaccaggaggccccggacctgcagagccagcagccggcctct
gggcaacagtggggcccctgtctcacccagctgttggaagcctctttcacagacatgcat
ggatcctatgagggctgggagggaggctccttcccctgcatcagagtgaagaaaaaccac
gactctatgccaaggatatcggtgcgtgtgcgcggcggtgaggctcagggcccggcagcc
ggtctgagtgggatgaacctgggcctcatgaaggatctcgggtccaccgtcttcgaaagc
cactgtgaattcaacgagaaatccagctcgccattttcttctaaccgcaccatgtttgag
acagaagagatggtgattccggccgacccgcaggaaatgctccagtttcaagaacagtgt
gtggctcagtgtcggtgcgcggtggacatcagcttcccgctggcgtacatcctcctgccc
agcaaacaggctttccagagcatctacaacaggatcaataatgacctgttgatgtgggag
ccgcctccccctcctctcccctcggccccgggccccgaccagagccgccgtcccttcgac
gagttccagctgtgcaagtcggccttcagactggactctgactctgaagaggatgagcct
cagttttacttggccagcgattcatctggaaggatgcagcagtcagttcctcttcccagc
aacaacctcagcctcctctccctcactgtgattattgggaaaggtcgcctgcaagccaga
actgacaggaaggaggatgaaactcagggagaacttgttcttgacctggaaggggggaag
attttcagcgtggcacagcatcaaaatgatcccaacctcaacttcctgacactggaaagc
aaacgagtggagctctaccatcgagctgtggttaaagacacctctgtcccagagaggttg
gagatgcccagcttcacaccacccacacagctggagcccaccatctaccccacagagctg
ggagtgagcagtgtacgaggacgggaagaggagccacagatgttgtctacagccatcaaa
atcaccctggacctccagaggaacgtcaaggagttcctggtcgctcttcagctgcaaggt
gccaccatgaggcattacatgacgcagagcaaccagagctggcacgagcagctgattgac
ttcctggacgttgtcgacgaccccatcttgggctacacggcaccggctgtcatcaccatc
ctccacacacacctcgcttcctgcgctgtggactacaggcctttgtatctgcccctgaga
gtcctgttcacagcagagtcattttctctgtccagtaacatcattgtagacaccgccacc
ttccacctcagattcatcctggatgattctgctctctacctctctgacaaatgtgagact
gacacagtggacttgaggaaagattacgtgtgtgttctggacattgacctgctggagctc
gccatcaccacatggaaaggcagcgatgctggaaagctgtcgcagcctctctttgagctg
cgctgctccaacaacgtggtgcacctctacacctgcgcagactcctgcgccgccctggtc
aatctgctgcagtatctggtcgcccagggggacttgcaccccccaccacgacacacctcg
cctactgaaatagctggtcagaaattactgctgtcagaaagtcctgcgtctctgccgcct
tgtcctccagctgagaccgcagagatcaaccagtacgacctggctgatgccttaatcgac
acagagaggagccacagagacagtttagacccagagtctccttccgtgccgaggggctcc
cccgtctccgtctatttgtttcctggcgaaggtacgaagcagagcccgtccgttctgcag
agggaggagtctgagctcgatgggttggttgccacggcgatggaggcacagcctgacatg
atactagatgatggctccgagggctccactgacaacgatgacttctgcatcctggaggcg
cctggcatgggcatacctcccagagatggagagcccgtggtgaccgtgctctgcgagggg
cccatcaaggtaaaggacagccacttttccaggcctcgaggaagctccgacctgctgaga
gctccgagcggattcccggtgccgcacaccagggtggtgctgaaggaaatctctgtggtg
tggcatctctatggcggcaaggacttcggtggcaagccgatgtccgtacatgctcagaac
tcaaacaggggtcgctctgtccctgtgggtgttcgtggttctccgtctcgctctgttgcc
tctgcccgtcctcagaactcctggcgctgggctggaggcagcggccgtcagcactcactg
ctgatggagatccaactcaccaaggtgtccttccagcatgagtcctacccagtggcagta
gcaggccaggacggggacgggtcgctgacctctggggtcggccccagcggggagcaccct
ctgtcccggcaggtcttcatcgtgcaagagctggagattcgggaccgcctggcctcttca
caactcaacaagttcctctacctctacaccagcgagagcatgcctcgccgagcccactcc
aacatgctgactgtgaaggccctgcaagttttaccagagtcgggactcggaggacccgag
tgttgcttgagggtcagcctgctgccgctgcgactcaacatcgaccaggatgcgctgttt
tttctgaaggacttttttagtaatctagcatccgctgttaacccctacatgcctgtggat
cctgctgctgaagtcacagtgaaggtggatccttcccagaaaggctctgaggaggccgga
gcagacgccggtctcggtcctgacctcacagcctccgtggaaaccacctacagcgagcag
agctcctcctctgctggctcctcctcttcctcatctgagcagccaatctacttccgggaa
tttcgtttcacctctgaagtgcctatctggctcgactatcacgggaagcatgtggtcatt
gagcaggggacgtttgcagggattctgatcggtctggctcagctgaactgctcagagctg
aagctgaagaggctctgctgcagacacggtctactcggtgtggataaagtgatccagtac
gccatcacagagtggctgacggacatcaggaagaatcagctgcctggcattctgggaggc
gtcggccccatgcactcagtagttcagctgttccacggagtgagggatcttttctggttg
cccatagagcagtacaggaaagacgggcgcattattcgaggtctccagcggggggcagca
tcatttggtacctctacagcatcagctgctctggagcttagcaacaggctggtgcaggcc
atccaggctacagcagagacggtgtatgacatcttgtctccaacgcctccactgaatcgg
tttgccatcaccgagggtcgggcccccgcaagccggccccgcagagccgcgcagccggcg
gatctcagagaaggagtagccaaagcttacgacaccgtcagagagggagtgatcgacacg
gctcagaccttgtgtgaagtggcgtcccgcggccacgagcagaaaggtctccccggcgca
gtgggcggcgtcctgcgtcagatcccgcccactgtagtccgacccctgatagtggcctcc
gaggcgacctccaacctgctgggaggcatgcggaaccagatcaaacccgacgcccgcaaa
gaggacttcctcaagtggcgcacggaggatgcacaagaatga
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