Gambusia affinis (western mosquitofish): 122836986
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Entry
122836986 CDS
T07758
Symbol
stx5a
Name
(RefSeq) syntaxin-5a isoform X1
KO
K08490
syntaxin 5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
122836986 (stx5a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122836986 (stx5a)
Membrane trafficking [BR:
gaf04131
]
SNARE
Syntaxin (Qa)
Stx-cisGolgi
122836986 (stx5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNARE
Syntaxin-5_N
HrpB7
Apolipoprotein
SEO_N
DUF16
Syntaxin
Vac_Fusion
DUF2207_C
Use1
Prominin
MCPsignal
Motif
Other DBs
NCBI-GeneID:
122836986
NCBI-ProteinID:
XP_043982959
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Position
LG09:complement(17549595..17557772)
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AA seq
385 aa
AA seq
DB search
MTRIGTLTVGLVTSHQKHRQATLKWCDIDSNPLEEEEPVVSSDPERVSYPLIGGTMTCRD
RTLEFQSACKSLQGRQQNGVQPSKPAHNALRQHSDFTLMAKRIGKDLSNTFAKLEKLTFL
AKRKSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQDLVRSRGAPGGRHIQTHSNTIVVS
LQSKLASMSNDFKSVLEVRTENLKQQRSRREQFSQPPVASSPMMANNFRSRKKGAQEPHA
AREPRNDYQGYTTSNLKESSVLMQDESRSMGDVAIDMDSQSNPLQLQLIDEQDSYIQSRA
DTMQNIESTIVELGSIFQQLAHMVKEQEETIQRIDANVEDTQLNVEAAHTEILKYFQSVS
SNRWLMIKIFLVLIVFFIIFVVFFA
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgacccggattggaactttaactgtagggttggttacttctcatcagaaacatcgacaa
gccacattaaaatggtgtgatatcgactcaaacccgcttgaggaggaggaaccggtcgtt
tctagtgatccagagcgggtttcttatccactaatcggcggcacgatgacttgccgcgac
cgaaccctggagtttcagtcggcctgtaaatctctccagggcagacagcagaatggagtg
cagcccagtaaaccagctcacaacgccctcaggcaacacagcgactttacacttatggcc
aagagaattggaaaagacttgagcaacacgtttgccaaattggaaaaactcacttttttg
gcgaaaagaaaatctctgtttgacgacaaggcggtggagatagaggaactcacctacatc
attaagcaagatatcaacagtctgaacaaacagatagcacagctgcaggacctggtgagg
tcccgcggcgccccgggtggccggcacatccagacccactcaaacaccatcgtggtgtcg
ttacagtccaaactggcatccatgtctaatgactttaaatcagtcctagaagttcgaact
gagaacctgaagcagcagcgcagcaggagagagcagttctcccagcctcctgtagcgtct
tctcctatgatggccaataactttaggagccgcaaaaaaggggcccaggagccgcatgca
gctcgcgagccgcgcaatgactaccagggctatacaacctcaaatttaaaagaaagctcg
gtgctgatgcaggacgagtcccggagcatgggggacgtggccatcgacatggactcccag
agcaaccctctgcagctccagctcattgatgagcaggactcgtacatccagagccgtgca
gacaccatgcagaacattgagagcaccatcgtggagctgggctccatattccagcaactg
gctcacatggtgaaggagcaagaagagaccatccagaggatcgacgccaacgtggaggac
acacagctgaatgtcgaggctgctcacacagaaatcctgaaatacttccagtcagtctcc
tccaaccgctggctgatgatcaagatctttcttgtcctcatagttttcttcatcatcttc
gttgtcttcttcgcataa
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