KEGG   Gambusia affinis (western mosquitofish): 122837035
Entry
122837035         CDS       T07758                                 
Symbol
cetn2
Name
(RefSeq) caltractin isoform X1
  KO
K10840  centrin-2
Organism
gaf  Gambusia affinis (western mosquitofish)
Pathway
gaf03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:gaf00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    122837035 (cetn2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:gaf03019]
    122837035 (cetn2)
   03036 Chromosome and associated proteins [BR:gaf03036]
    122837035 (cetn2)
   03400 DNA repair and recombination proteins [BR:gaf03400]
    122837035 (cetn2)
Messenger RNA biogenesis [BR:gaf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX-2 complex
     122837035 (cetn2)
Chromosome and associated proteins [BR:gaf03036]
 Eukaryotic type
  Centrosome formation proteins
   Centriole proteins
    122837035 (cetn2)
   Centrosome duplication proteins
    Centriole replication proteins
     122837035 (cetn2)
DNA repair and recombination proteins [BR:gaf03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     XPC-HR23B-CETN2 complex
      122837035 (cetn2)
SSDB
Motif
Pfam: EF-hand_7 EF-hand_1 EF-hand_6 EF-hand_8 EF-hand_9 EF-hand_5 AIF-1 EF_EFCAB10_C EH Dockerin_1 DUF7645 SUB1_ProdP9 SurA_N_3 SRI HerA_C RTP LETM1_RBD DUF5580_M
Other DBs
NCBI-GeneID: 122837035
NCBI-ProteinID: XP_043983035
LinkDB
Position
LG09:complement(8012731..8021473)
AA seq 245 aa
MTLMYFSCEKTPASLCGARRGTQETSCTQLCGCDVWSQEGHMGLEAVSSCRCHWLRGDVT
LHRSPVHHRGHQATSAKKPSLQGPVAPPRKKTTPKPELTEEQKQEIREAFELFDTDGSGH
IDVKELKVAMRALGFEPKKEEIKKMIAEVDKDGTGKISFADFLAVMTQKMAEKDSKEEIL
KAFRLFDDDETGKISFKNLKRVAKDLGENLTDEELQEMIDEADRDGDGEVNEQEFLRIMK
KTCLY
NT seq 738 nt   +upstreamnt  +downstreamnt
atgacgttaatgtacttcagctgtgagaaaacacctgctagtctctgtggagcgaggaga
ggcacacaagagacatcctgcacacaactctgtggatgtgatgtttggtcccaagagggt
cacatgggactggaggctgtatccagctgtcgctgtcactggctcagaggtgatgtcacg
ctccacaggtcaccagtacatcacagaggtcatcaggcaaccagtgccaagaagccatcc
ctacaaggtccagtggcccctcctcgcaagaagacaactcccaagccagagctgactgag
gagcagaagcaggagatcagggaggcctttgagctgtttgacaccgatggctctggacac
atcgatgtgaaggagctcaaggttgcaatgagagctctggggttcgaaccaaagaaggag
gagatcaagaagatgattgcagaagtggataaggacgggacggggaagatctccttcgct
gactttctggcagtcatgacacagaaaatggctgagaaggactccaaagaggagatcctt
aaagcgttccggctgttcgacgacgacgaaacaggcaagatctcttttaagaacctgaag
agagtggccaaagacctcggagaaaacctgaccgacgaggagctgcaggaaatgatagat
gaagcggacagggatggggacggagaagtgaacgagcaggagttcctgcgcatcatgaag
aaaacctgcctgtactga

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