Gambusia affinis (western mosquitofish): 122837073
Help
Entry
122837073 CDS
T07758
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf00061
Fatty acid biosynthesis
gaf00071
Fatty acid degradation
gaf01100
Metabolic pathways
gaf01212
Fatty acid metabolism
gaf03320
PPAR signaling pathway
gaf04146
Peroxisome
gaf04216
Ferroptosis
gaf04920
Adipocytokine signaling pathway
Module
gaf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122837073
00071 Fatty acid degradation
122837073
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122837073
09143 Cell growth and death
04216 Ferroptosis
122837073
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
122837073
03320 PPAR signaling pathway
122837073
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
gaf01004
]
122837073
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
gaf04147
]
122837073
Enzymes [BR:
gaf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122837073
Lipid biosynthesis proteins [BR:
gaf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122837073
Exosome [BR:
gaf04147
]
Exosomal proteins
Exosomal proteins of breast milk
122837073
Exosomal proteins of breast cancer cells
122837073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
CE2_N
Motif
Other DBs
NCBI-GeneID:
122837073
NCBI-ProteinID:
XP_043983084
LinkDB
All DBs
Position
LG09:complement(3994784..4007465)
Genome browser
AA seq
784 aa
AA seq
DB search
MMALNCFMDVCLKGKPGSRVHERSSSNFRCARGELEAAAKFIEYQCHFLLVAAAAAAAAA
ALLGSLSVDDQQRLNSHSFLFQCHSNVLSQEFLEKMNSLDLEDVSQYIRSISTPMLVSVG
AVAAATTYYLTTRPKALPPLWDLHRQSVEVPGSDFVHRSVLQKEDSYLTHIYEDARTMYE
SFIRGARVSNNGPCLGFRKPKQPYEWMSYKEVMKRAENLGSAFLHKGHSKSTNPHIGIFS
QNRPEWTISELACYTYSLVSVPLYDTLGTEAISYIIDKASISTIVCDVTDKASLVLDCLT
DMKHSVKTIVLMETPSASLVERAQQAGVHILSLQETEALGQANYKQPIPPQPDDMAVLCF
TSGTTGSPKGAMLTHGNIVCNYSSFIRLTQLCCPLNSSDIHISYLPLAHMFERIVQGVML
VHGARIGFFQGDVRRLSDDLIALRPTVFPVVPRLLNRMYDKIFGQANTSLKRWLLDLAYR
RKQAEVMRGIVRTDSIWDRLIFRKVQASLGGRVRLMVTGAAPISPTVLCFLKVAIGCQFY
EGYGQTECTAGCTMTLPGDCSAGHVGPPLPCNAIKLVDVAEMNYLAANGEGEVCVKGPNV
FQGYLKDPEKTAETIDADGWLHTGDIGKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIEN
IYTRSDAVVQVFVHGDSLQACLVAVVVPDPDFLCSWAKKTLSLQGSYQELCGKAEVKAAI
LEDMLRLGKEGGLKSFEQVKAIHIHTEMFSIENGLLTPTMKSKRNEMRQYFRSQIDELYA
GISM
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgatggctctgaattgttttatggacgtctgtttgaagggcaaacccggaagtcgcgtt
cacgaacgaagcagctccaacttcaggtgcgcgcgtggagagcttgaagcggcggcgaag
ttcattgagtatcagtgtcacttcctcctcgtggccgcagcagcagcagcagcagcagca
gcgttgctggggtcgctgtccgtggatgatcagcagagattaaacagccactcctttctg
ttccagtgccacagcaacgtgctgagccaggagttcctagagaagatgaactccttagac
ctggaagacgtgagccagtacatcaggagcatctccacccccatgttggtcagcgtggga
gcagtggccgctgccaccacctactacctgactacacgacccaaagccctcccaccgctc
tgggacctgcacaggcagtcagtcgaggttccgggcagtgattttgtgcaccgctcagtg
cttcagaaagaagacagttacctgactcacatctatgaagacgccagaactatgtacgag
tccttcatcagaggagcaagagtctccaataacggtccctgtttgggattcaggaaacca
aagcagccttacgagtggatgtcttacaaagaggtaatgaagcgagcagaaaatctgggt
tctgcgtttcttcacaaaggacattcaaaaagcaccaacccccacattggtattttctct
cagaacagaccagagtggaccatcagtgagctggcgtgctacacctactccctggtgtcc
gtccctctttatgacaccctgggaacagaggccatttcctacatcatagacaaagcttcc
atctctaccatcgtgtgtgacgtgacggacaaagccagcctggtgctggactgccttacg
gacatgaagcactcagtgaagaccattgttctgatggagacgcccagcgccagcctggtg
gagagggcccagcaggccggagtccacatcctgagcctgcaggagacggaggctctcggt
caggccaactacaagcagccgattcctcctcagcctgatgacatggcagtcctctgcttc
accagtggaaccacaggaagcccgaaaggagccatgttaacacatggcaacattgtgtgc
aactactcttccttcatcaggctgacacagctgtgctgtccgctgaattccagcgacatc
cacatttcttacctccccttggctcatatgtttgagaggatagtccagggggtcatgctg
gtgcatggagccagaatcggctttttccagggagacgtccgccggttatcggatgatctg
attgcactgaggcctacggtgttcccagtcgtacccagacttctcaacagaatgtatgat
aagatctttgggcaggccaacacctctctgaagcgctggctcctggacttggcgtacagg
aggaagcaggcagaggtcatgagaggcatcgtgcggacagacagcatctgggatcgactc
atcttcaggaaggtccaggccagcctcggaggccgcgtgcgtctcatggtgacaggagcg
gcccccatctcccctacagtcctctgcttcctcaaagttgctatcggctgtcagttctac
gaaggctacgggcagacggagtgcaccgccggatgtaccatgacccttcctggcgactgt
agtgcaggtcacgtcggacctcctctgccctgcaacgccatcaaactggtggatgtcgct
gagatgaactacctggctgcgaacggggaaggggaggtgtgtgtgaagggtccaaacgtt
ttccagggctacctgaaagacccggagaagaccgcagagactatagacgcagacggatgg
ctgcacaccggagacatcgggaagtggctccctaacggcacgctgaagatcgtcgacagg
aagaagcacattttcaagctggcccagggcgagtacatcgctcctgagaagatcgagaac
atctacacgaggagtgatgcagtggtgcaggtgtttgtgcatggagacagtctgcaggct
tgtctggtagcagtggtggtccctgaccccgacttcctgtgcagctgggccaagaagacg
ctgagcctgcagggaagctaccaggagctgtgtgggaaagcggaggtcaaggcagccatc
ttggaggacatgctgcggcttggcaaagagggagggctcaagtcctttgagcaggttaag
gccatccacatccacacagagatgttctccatcgagaacggcctgctcaccccaacaatg
aagagcaagaggaacgaaatgcgccagtacttcagatcccagatagatgagctgtacgct
gggatcagcatgtag
DBGET
integrated database retrieval system
