Gambusia affinis (western mosquitofish): 122837133
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Entry
122837133 CDS
T07758
Name
(RefSeq) rab11 family-interacting protein 1 isoform X1
KO
K12484
Rab11 family-interacting protein 1/2/5
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
122837133
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
gaf04131
]
122837133
Membrane trafficking [BR:
gaf04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
122837133
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
RBD-FIP
DUF4635
DUF4254
Motif
Other DBs
NCBI-GeneID:
122837133
NCBI-ProteinID:
XP_043983195
LinkDB
All DBs
Position
LG09:19831439..19843901
Genome browser
AA seq
1443 aa
AA seq
DB search
MMSLIDLDDDQRWVPTHVNVTVLRARGLRTKGKHGSRYLYTIIQVGKEKYTTGLVEKAEV
PVWNEECCFELLPGILEEGGRSAFPPGSGDLVLTVMHRVLIGLDVFLGQTIIPLDKIFQD
GMCPRDEWFKLNSKAGRKEKERGELQVTVQFTRNNMTASMFDLTMKDKPRSAFGKLKDRV
TGRKRGDVESSSAIVPGRYAALSGSLGQPFGEEGGLGVESKEVEITEEKRSKMKDFFKGR
LRKSSDTRSCSSLASESSLSSMASDNLGPPPSLDLLSDPPSSPIYTSKVRIDAHYGETDL
AKKVLTTQHTTKILTHKRAFSDEASKITTALPRSNVAVESLKGQTMTQSKSSLCINGSHV
YDSEPLSPKISGALPSKLVLLEKCSPLSRSLQNLTKRGEEKSSFTEGRRWSFDKLKKEEK
EEEKESLAQEAQTGDRPVQAAMPIVSSAGCSPEKGRKLRKTLFSAGRSDSLPAKSDLNQA
GASSEGRLRGWFGSGDSQNKPRLEVSTMVESSSDVPPSLSPCSPVPPPCSSPSASPSGHV
SPDNHSHINLFTPSSSPSSNPLSPSNPFLPCMQRNPFFEELVAEELEKLPSVAPCSLSDS
PPFHYNTLPADSNLEVSCKNRVSIKRERPRPVAKQISLPALVPKGTTPGSPIHSPPSSMS
EHPGEWEKSFDAFACSRLNSPKGRLPPEQPRTSPTLSCKRSFSPVENIGCNYIQELQRCN
DEPPPLPPRRLIRTSVNEIFSDGWLHRGQELAVHKEAYLLSQTGVASLQHGREGESKKEI
PSPNTSSSSGTSESVGVHTQLYTNNTSFGRISEENSKRFKYEPLEDVADCWGGTLFEQDL
YRRACRGNYGQQRLNSHHLSMSTEENAGDKISFKNSGSEGLVDSDHFSILSSVPPDVPNI
SYTTAEETEEPNPCESTCLNNNISFSLTLGDLNMNVTNSDFGFIDSDGSSQSEADDNSKS
NLGENFLPQGSQLDIYQKETTSGDIFTLKDTYITTLNSSFEVSASSKKLCKVPPVCQDNC
HDCLCELASETLCGPCMSKSQGIVAPLQQNPASNSPDVEAEHRGEQIRCDDDFEKIKKDC
DDNGNPEDNLDKRKQTESFSGVVSARIRPKGVSRQNSSDSPSSQSKYGDREFVQFLSLVQ
NISEVSEGPLSYQPTKSVLSSLQVLEHPNKSKLTSVSDQTHQFMSKTISPIPSLDKEKTT
PISFEDLHAKVAPYCRTPSNTKIRKSLEEHEPCSPSIPSTLPLSADTLVFCTPIQASSTG
PIAKVSTSLAVASSTPSLSATFTTDQPLTDARHSLLPEETQPAGSLPLQESRSHPVKPLT
SSQPEKKEGRSVLEKLKSTINPGRSIHQATPEPEKSPEVTADRVAQYQHLTNMELISLLL
QQEMDMEKQQAASDQQGAHLQKVEAELKKVKAQVRDLEDYIDNLLLRIMEQTPTLLQVRS
RHK
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgatgtccttgatagatctggacgatgatcagcggtgggtgcctactcatgttaatgtc
accgtgctccgcgccagggggctgcgaaccaagggcaagcacggcagccgctacctctac
accatcatccaggtggggaaggagaagtacaccaccgggctggtggagaaggcggaggta
cccgtgtggaacgaggagtgctgcttcgagctgctccccgggatcctggaggagggcggc
cgcagcgcgttccccccagggagcggagacctggttctcaccgtcatgcaccgggtcctc
atcgggctggacgtgtttctgggtcaaactatcatccctctggataagatattccaggac
ggaatgtgtccgagagatgaatggttcaagctgaactccaaggcgggtagaaaagagaag
gaacgtggtgaacttcaggtgacggtccagttcacccgcaacaacatgacagccagcatg
ttcgacctcaccatgaaggacaagccccggtctgcattcggcaagctcaaggatcgcgtc
actgggaggaaaaggggtgatgtggagtcttcctcagccattgtgccgggccgctacgct
gcgttgtcagggtccctggggcaaccatttggagaggagggagggcttggggtagagtca
aaagaggtggagataacagaggagaagaggagcaagatgaaagatttcttcaagggaaga
ctgcgaaagtcatctgacacgaggtcgtgctcatctctggcctcagagagcagcttgtct
tccatggccagtgataaccttggccctccgcccagcctggatctgctgtcagaccctccc
agctcccccatttacacaagcaaagtgagaattgatgcacactatggagaaacagacctc
gcaaaaaaagtgctcaccacccagcacaccaccaagattcttacacacaagcgagccttc
agcgatgaagctagtaagatcaccacagcactccctcgatcaaatgtcgcagtggagtct
ctcaagggtcagaccatgactcaatccaaatcatctctctgtataaatggaagccatgtc
tacgattcagagccattgtctccaaaaatctctggagcactcccgtccaaactggttctg
ctggagaaatgttcaccactgtctcggtctctacagaatctcacaaaaagaggagaggag
aaaagttcctttaccgagggacggcgctggtccttcgataagctgaagaaagaggaaaag
gaggaagagaaagaatcattagctcaagaggctcagactggagatcgccctgttcaggca
gcaatgccaattgtatcttcagcaggttgttcacctgaaaaaggaaggaaactgagaaag
acattgttctctgcagggaggagcgattctctgcctgctaagtcagacctaaaccaggct
ggtgcttcatcggagggaaggctcagaggctggtttggctccggagactcccagaacaaa
ccaaggctggaagtttctactatggtagaaagcagctcagatgtacccccttccctctct
ccttgctccccagtacctcctccgtgctcctctccttctgcttccccctctggtcatgtt
tcacctgacaatcacagtcacatcaacctcttcaccccttcctcttctccttcctcaaat
cctctctccccttccaacccttttctgccatgtatgcagcgcaaccccttttttgaggag
cttgtggcagaagagctagagaagttgccttctgttgcaccgtgctccttatcagactca
cctccctttcattacaacactttgccagcagactctaatcttgaagtcagctgtaaaaat
agggtttcaataaaacgtgagcgcccccggccagttgctaagcagatatcactacctgct
ttagtgcccaaaggaaccacgcctggctcccctatccactcccctccttcctccatgtct
gagcatccaggagaatgggagaagtcctttgatgcctttgcctgtagtagactcaactcc
cctaaaggtagactccctccagaacagcccagaaccagtccaaccttatcttgtaaacgt
agcttttctccagtggaaaacattggctgtaactacatacaagaactgcaaagatgcaat
gacgagcctccacctttacctccaaggagacttataaggacttcggtgaatgaaattttc
tcagatggctggctacacagaggccaggaattagctgtccataaagaagcctatctcctc
tctcagactggtgtggcatctttgcagcatggcagggagggtgaatccaaaaaagagatc
ccttctcccaacacaagttcaagcagcggaacgtcagagtctgtaggcgtccacacccaa
ctatatacaaacaacacctcatttggacgtatatctgaagagaactccaaaaggttcaaa
tatgaacctttggaagatgtagctgactgttggggtggaacattgtttgagcaagacttg
tacagacgtgcttgcaggggaaattatggacaacaaagactaaacagtcatcatttatca
atgagcactgaggaaaatgcaggggataaaatctcattcaagaactcagggtctgaaggg
cttgttgatagtgaccatttcagcatattgtccagtgttccccctgatgtaccaaatata
tcatatactacagcagaggagacagaagaacccaacccatgtgaatctacatgcctcaac
aataacatatctttttcactaacactaggagaccttaacatgaatgtgaccaattcagat
tttggtttcattgactcagatggatcttctcaatctgaagcagacgataactccaaaagc
aatctaggagagaactttctaccccaaggttcacaattagacatttaccagaaggagacc
acatctggggacatattcacattaaaggacacctatataaccactttgaactcttctttt
gaagtatctgcatcttctaaaaaactttgcaaagtaccaccagtttgccaagacaactgc
catgactgtctatgcgaactagcaagtgaaacattgtgtggtccctgtatgtcaaagagc
caagggattgttgctccattgcaacaaaatcctgcatctaactcaccagatgttgaagct
gaacatagaggtgaacaaataagatgtgatgacgattttgaaaagataaagaaagactgt
gatgataatgggaacccagaagacaacttggacaaacgtaagcagaccgagtcattttca
ggagttgttagtgcacgaatcagaccaaaaggagtttctagacagaacagcagtgacagc
ccaagcagccaaagtaaatatggagacagggagtttgtgcagtttctatccctcgtccag
aacatttcagaagttagtgaaggaccattgtcttatcaaccaactaaatcagtgctgtct
tctttacaagttcttgaacaccccaacaagtctaaattgacctctgtcagtgaccaaaca
caccaatttatgtctaaaacaatatccccaataccttcattggacaaagaaaaaacgact
ccaatcagctttgaagatcttcatgcaaaagttgcaccatactgcagaaccccttccaat
acaaagattaggaaatctttggaagaacatgaaccctgttctccctccatcccttctaca
cttcccctgtcagctgacaccctggtcttttgcacccccatacaagcgtcaagcacaggc
cctattgctaaagtcagcacttctctggctgtggcctcctccaccccctcgctgtctgcc
accttcaccactgaccagcccctgactgatgcacggcactcacttttacctgaggagaca
cagcctgctggcagcctgccccttcaggagagcaggtctcatccagtgaaaccgttgaca
tccagccagcctgagaagaaagagggtcgctcagttcttgagaagctaaaatctaccata
aatccaggacgatccatccatcaggccacacctgaacctgagaagagtccggaggttacc
gcagacagagtggctcagtatcagcaccttaccaacatggaactgatctccctgctactg
cagcaggaaatggacatggagaagcagcaggcagcatctgaccagcagggggcgcacctg
cagaaggttgaggcagagctgaagaaagtgaaggcgcaggttcgagacctggaggactac
attgataatctgttactgcggatcatggagcagactcccacactgcttcaagtacgctca
aggcacaagtaa
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integrated database retrieval system
