Gambusia affinis (western mosquitofish): 122837202
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Entry
122837202 CDS
T07758
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
gaf
Gambusia affinis (western mosquitofish)
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
gaf03019
]
122837202 (fmr1)
Messenger RNA biogenesis [BR:
gaf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
122837202 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
122837202 (fmr1)
mRNA cycle factors
Stress granule specific factors
122837202 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-GeneID:
122837202
NCBI-ProteinID:
XP_043983309
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All DBs
Position
LG09:4868429..4885843
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AA seq
605 aa
AA seq
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MEELVVEVRGTSGAFYKAFVKDVHEGSVTVAFENNWQPERQIPFQDVRFPPPTGFSKEIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPVNPNKP
ATKNTFIKIRLEVPEDLRQMCSKESAHKDFKKAVGAFSITYDSEKKQLVILSVNEVTTKR
ANMMSDMHFRSLRTKLSLMMRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDQDAVRIARSYLEFSEDIIKVPRNLVGKVIGKN
GKLIQEVVDKSGVVRVRIEPENDKKPSAAAAAAADEGMVPFVFVGTKESISNATVLLDYH
LNYLKEVDQLRLERLQIDEQLRQIGGGGGGGGTGPRNPKDKSYVFDNGMGMGMGRGAGGG
KPYVGGRGGRGRRGGGAAFASGTNSEASNASETESDHREELSDWSLAPTEEMMTGGGSLP
RRTDGRKRPGGGGLRGRGGRGRGGGGYKGDDMQWGEPRPRHVRDPKPRGQEDTLQIRVDG
NNERSVQHSSGGRGGGGAGGGPSSSQSGIAVCGDGQSRHHHQRPLRDRGMKKDKQDAPAL
VNGVS
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggaggagcttgtagtggaagtgagagggacaagtggagccttttataaggcttttgtg
aaggatgtccacgagggatccgtcactgtggcatttgaaaacaattggcagccggagcgt
cagatcccgttccaggacgttcgcttccctcctccgacaggcttcagcaaagagataaat
gagagcgatgaagttgaggtgtactccagagccaatgacaaggagccgtgtggatggtgg
ctggccaaggttcgcatggtcaaaggagagttttacgtgatcgagtacgcggcgtgcgac
gccacgctgaacgagatcgtgacgctggagcggttacggccggtcaacccgaacaagcca
gccaccaaaaacaccttcatcaagatcaggctggaagtccctgaagacctgcgacagatg
tgctccaaagagtcggcgcacaaagacttcaagaaggccgtcggcgcgttcagcatcacc
tacgactctgagaaaaagcagctggtcatcttgtcggtgaacgaggtcacgacaaagcgg
gccaacatgatgagcgacatgcacttcaggagcctccgcaccaaactgtcgctcatgatg
cggaacgaggaggccagcaggcagctggagagttccagacagctggcgtctcggtttcat
gagcagtttgtggttcgggacgacctgatgggtctggccatcgggactcacggcgccaac
attcagcaggcgcgaaaagtccctggagtcaccaacatcgacctggacgaagaaacgtgc
accttccacatatacggggaggatcaggatgccgtccgaatagctaggagctacctggag
ttttccgaagatatcatcaaagttccccgaaacttagtcggaaaagtgatcggaaagaac
ggcaagctgatccaggaagtggtggataagtccggtgtggtgagggttcgaatcgagccg
gagaacgacaagaagccctcggcggcggcggcggcagcagcagatgagggaatggtgcca
tttgtgtttgtggggaccaaggaaagtatttccaatgcaacagtgctcctggactatcac
ctcaattacctaaaggaggtggaccagctgcgcttggagcgccttcagattgacgagcag
ctgcgacagatagggggcgggggcggagggggagggacaggcccccgaaaccccaaagac
aaatcctacgtgttcgataacgggatgggaatggggatgggcagaggagcaggaggtggg
aagccctacgtgggaggaagaggcggacggggccggagagggggcggggcggcgttcgcc
tcaggcaccaactcggaggcgtccaacgcttcggagacggagtcggaccaccgagaggag
ctgagcgactggtccctggctcccaccgaggagatgatgacaggaggcgggtccctgccc
aggcggacagacggcaggaaacgacccggaggggggggcctgagaggccgcgggggcaga
gggagaggagggggagggtataaaggtgatgacatgcagtggggcgagccaagacctcgt
catgtaagggacccgaagcctcgaggccaggaagacacactgcagatccgtgtggacgga
aacaacgagcgcagcgtgcagcactcatcaggcggccgaggaggaggaggagcaggagga
ggaccttcttcatcccagagtggcatcgccgtctgcggggacggccagtcccgccatcac
catcagagacccctgagagaccggggcatgaagaaggacaaacaggacgctccggcgctg
gtgaacggagtgtcgtag
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