Gambusia affinis (western mosquitofish): 122837212
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Entry
122837212 CDS
T07758
Symbol
syvn1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
gaf
Gambusia affinis (western mosquitofish)
Pathway
gaf04120
Ubiquitin mediated proteolysis
gaf04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
gaf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122837212 (syvn1)
04120 Ubiquitin mediated proteolysis
122837212 (syvn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
gaf04121
]
122837212 (syvn1)
Enzymes [BR:
gaf01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122837212 (syvn1)
Ubiquitin system [BR:
gaf04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
122837212 (syvn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-C3HC4_3
zf-RING_16
zf-RING_11
zf-RING_5
zf-ANAPC11
zf-RING-like
zf-Nse
FANCL_C
Endonuclease_7
Motif
Other DBs
NCBI-GeneID:
122837212
NCBI-ProteinID:
XP_043983332
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Position
LG09:complement(5237750..5248692)
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AA seq
632 aa
AA seq
DB search
MVRAALVTATSMALTGAVVAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKI
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISWVFHLRVLSLLGLLAVMDFLFVNHACHSIITRGASVQLVFGFEYAI
LLTMVLTTFIKYVLHTVDLQSENPWDNKAVYMLYTELFTGFIKVLLYIAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEDLQASDNVCIICREEMVT
GAKKLPCNHIFHSSCLRSWFQRQQTCPTCRMDVLRASNNNQAQAQAPPPAPAPAAPANAP
AAPAPNVVPGMLPGFPPGVFPFWGPFPAVPPPAAAAPPAAPAAADAPTSSTDTTQAAGTS
QPTSAAADAATSSAAAAPGSAIPGFPFSFPPPPFPAAPWLPMPPPFVSSMPPPPPSLSRL
TEEELRELEAEGRRGLEARLQCLQNIHTLLDAAMLNIHHYLSTVATLAPPRPEGGAAEGG
GADQEAASAGAESPATERDSSTSDPVGGATVSSQPADSTSSASEAERKENWDEGAADDEN
GEPSAAELRRRRLRKLETSPSSPASPSPPPEN
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgagcagccctggtgaccgccaccagcatggcgctgaccggcgccgtggtggcc
cacgcctacctgctcaaacatcagttctacccgaccgtcgtgtacctcaccaaaagcagc
cccagcatggcggttttgtacattcaggcgtttgtgctggtgttcctgctggggaagatc
atgagaaaggtgttctttggccagctgagggctgctgaaatggagcacctcatcgagcgc
tcctggtacgcggtgacggagacctgcctggcgttcaccgtgttcagggacgatttctcc
cctcgcttcgtcgccctcttcaccctcctgctcttcctcaagtgtttccactggctggcc
gaggaccgggtggactttatggagaggagtccaaacatatcctgggtttttcacttgaga
gttttatctcttctaggacttctggctgtcatggacttcctgtttgttaaccatgcctgc
cacagcatcatcaccagaggagcttcggtccagctcgtttttggctttgagtacgccatc
ttgttgaccatggtcctgacgaccttcatcaagtacgtcctgcacaccgtcgaccttcag
agtgagaacccctgggacaacaaggccgtctacatgctctacaccgagctcttcacaggt
ttcatcaaggttcttctctacatcgccttcatgaccatcatgataaaggtccacaccttc
cccctgttcgccatccggcccatgtacctggccatgagacagtttaaaaaagctgtaaca
gacgctataatgtcaaggagagcaatccgcaacatgaacactctatatcctgatgcgact
ccggaggatctgcaggcctcggacaacgtctgcatcatctgtagagaggaaatggtcact
ggagccaagaagcttccctgtaatcacattttccactccagctgcctgcgctcctggttc
cagaggcagcagacctgccccacctgccgcatggacgtcctcagggcatccaacaacaac
caggcccaggcccaggccccgcccccggctccggccccggcggcgcccgccaacgccccg
gccgccccggcaccaaacgttgttcccggcatgctgccaggcttccctccaggagttttc
cctttctggggtcctttccctgcagttcctccacctgctgcggctgctccacctgcagct
cctgctgcagctgacgctccaacaagcagcacggacacgacgcaggccgctggcaccagc
cagcccacttctgctgctgcagacgctgctacgtcgtcagccgccgccgctccaggatca
gcaatcccaggattccctttctccttcccgcctcctcctttccccgccgcaccatggctg
ccgatgcctcctcccttcgtgtcgtccatgcctcctccgcctccgtcgctctctcgcctg
acggaggaggagctgagggagctggaggctgaagggaggaggggcctggaggccaggctg
cagtgtctccagaatatccacaccctgctggacgccgccatgctcaacatccaccactac
ctcagcaccgtcgccacgctcgcccctcctcggcctgagggtggcgctgcagaaggcggc
ggagccgatcaggaggcagcgtctgctggcgcagagagtcccgccacggagagggactcg
tccacctctgacccagtaggtggcgccacagtctcctctcagcccgctgactccacctcc
tctgcctcagaagcagagaggaaggagaactgggacgaaggagcggcggacgacgagaac
ggagagcccagcgcggccgagctgaggcgccgccgtctccgtaagctagagacgtcgcct
tcgtcaccggcttcgccgtcgccacctcccgaaaactga
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